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ProteomicsHistone modifications in Plasmodium falciparum at 0 hours post-invasion
Synchronized Plasmodium falciparum-infected human blood cultures were harvested at seven time points along the asexual intra-erythrocytic parasite life cycle: 0 hours post-invasion, 6 hpi, 12 hpi, 18 hpi, 24 hpi, 30 hpi and 36 hpi. Plasmodium histones were extracted using the standard hydrochloric ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Plasmodium Falciparum 3d7 (ncbitaxon:36329) 
2015-08-12 | MSV000079225 | MassIVE
ProteomicsHistone modifications in Plasmodium falciparum at 18 hours post-invasion
Synchronized Plasmodium falciparum-infected human blood cultures were harvested at seven time points along the asexual intra-erythrocytic parasite life cycle: 0 hours post-invasion, 6 hpi, 12 hpi, 18 hpi, 24 hpi, 30 hpi and 36 hpi. Plasmodium histones were extracted using the standard hydrochloric ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Plasmodium Falciparum 3d7 (ncbitaxon:36329) 
2015-08-12 | MSV000079228 | MassIVE
ProteomicsHistone modifications in Plasmodium falciparum at 36 hours post-invasion
Synchronized Plasmodium falciparum-infected human blood cultures were harvested at seven time points along the asexual intra-erythrocytic parasite life cycle: 0 hours post-invasion, 6 hpi, 12 hpi, 18 hpi, 24 hpi, 30 hpi and 36 hpi. Plasmodium histones were extracted using the standard hydrochloric ...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) Plasmodium Falciparum 3d7 (ncbitaxon:36329) 
2015-08-12 | MSV000079231 | MassIVE
TranscriptomicsAnalysis of Allelic bias in gDNA, cDNA and ChIP with H3K27me3 and H3K36me3 antibody with multiplexed padlock probe approach
In this experiment, we asked how the allelic distribution of the active and repressive chromatin marks in clonal cell lines relates to the transcriptional allelic bias. A multiplexed padlock probe approach (Zhang et al., 2009) enabled us to assess allelic bias in heterozygous exonic SNPs in two clo...
ORGANISM(S): Homo sapiens 
2014-02-07 | E-GEOD-53628 | biostudies-arrayexpress
ProteomicsMultiphasic chip performance characterization using human thyroid cancer cell line SW1736 and human plasma
Development of an online peptide fractionation system comprising a multiphasic LC chip that integrates reversed phase and strong cation exchange chromatography upstream of the MS based on the multi-dimensional protein identification technology (mudPIT). Chips were assessed in terms of chromatographi...
ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
MSV000081545 | MassIVE
TranscriptomicsscRNA-seq of mouse adipose stem and progenitor cells
We analysed a well-established fraction of mouse subcutaneous adipose-derived SVF cells that is generally considered to harbour adipose stem and progenitor cells (ASPCs). To study the molecular characteristics and the subpopulation structure of ASPCs, we performed three replicate scRNA-seq experimen...
ORGANISM(S): Mus musculus 
2018-05-01 | E-MTAB-5802 | biostudies-arrayexpress
UnknownThe psychosis human connectome project: An overview.
Not available
S-EPMC8542422 | biostudies-literature
GenomicsGenome-wide maps of H3K4me3 and H3K27me3 in HY(Hwayong) and chd1(chr729) rice.
We report the application of CHIP-seq technology for high-throughput profiling of histone modifications in HY(Hwayong) and chd1(chr729). By obtaining about 12 million reads of sequence from chromatin immunoprecipitated DNA, we generated genome-wide H3K4me3 and H3k27me3 maps of HY(Hwayong) and chd1(c...
ORGANISM(S): Oryza sativa Japonica Group 
2012-03-10 | E-GEOD-30490 | biostudies-arrayexpress
GenomicsBAF155 methylation at R1064 creates unique chromatin association patterns
CARM1, a coactivator for various cancer-relevant transcription factors, is overexpressed in breast cancer. To elucidate the functions of CARM1 in tumorigenesis, we knocked out CARM1 from several breast cancer cell lines using Zinc-Finger Nuclease technology, which resulted in drastic phenotypic and ...
ORGANISM(S): Homo sapiens 
2014-03-28 | E-GEOD-52964 | biostudies-arrayexpress
TranscriptomicsEstimating networks from RNA interference and microarray data
We here used the technology of RNA interference and cDNA microarrays to reconstruct a network between genes known to be disregulated in ER-positive breast cancer diseases. Therefor single genes of high importance were silenced and the effect of this pertubation was measured with cDNA microarrays Key...
ORGANISM(S): Homo sapiens 
2009-01-28 | E-GEOD-7033 | biostudies-arrayexpress
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