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Genomics
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ENA
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Disease
Alveolar soft part sarcoma
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Instrument Platform
NextSeq 500
(7)
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Publication Date
2023
(24)
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(5)
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(5)
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(3)
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(2)
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(1)
CHEBI ID
CHEBI:16890
(1)
CHEBI:137682
(1)
CHEBI:18021
(1)
CHEBI:30831
(1)
CHEBI:24344
(1)
CHEBI:84055
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(1)
Metabolite Name
Tyrosine (CHEBI:18186)
(1)
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(1)
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(1)
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N6-Acetyl-lysine (CHEBI:17752)
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3-Methyl-histidine(CHEBI:70959)
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N2-Acetyl-lysine (CHEBI:35704)
(1)
N-Acetyl-arginine (CHEBI:40521)
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First Public Date
2023
(24)
2024
(6)
2017
(3)
2020
(1)
2014
(1)
Study type
RNA-seq of coding RNA
(10)
Transcription profiling by array
(2)
DNA-seq
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Release Date
2022
(11)
2023
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Lab affiliation
Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada
(1)
Department of Biology, Institute of Molecular Systems Biology, ETH Zurich, 8093 Zurich, Switzerland
(1)
Member Cell and Molecular Biology Department St. Jude Children's Research Hospital Memphis, TN-38105
(1)
Université Paris Cité/CNRS, Institut Jacques Monod, FRANCE
(1)
Tags
xref:PubMed:38326311
(16)
xref:PubMed:37029109
(5)
xref:PubMed:38657118
(4)
xref:PubMed:27979841
(2)
xref:PubMed:37020053
(1)
xref:PubMed:25453902
(1)
xref:PubMed:28811253
(1)
xref:PubMed:37742993
(1)
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ASPSCR1-TFE3 reprograms transcription by organizing enhancer loops around hexameric VCP/p97.
Not available
S-EPMC10850509
|
biostudies-literature
Cite
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [HiChIP]
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [HiChIP]
PRJNA680491
|
ENA
Cite
ASPSCR1::TFE3 Drives Alveolar Soft Part Sarcoma by Inducing Targetable Transcriptional Programs.
Not available
S-EPMC11250573
|
biostudies-literature
Cite
ASPSCR1::TFE3 orchestrates the angiogenic program of alveolar soft part sarcoma.
Not available
S-EPMC10082046
|
biostudies-literature
Cite
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [hASPS_ChIP, histone_markers]
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [hASPS_ChIP, histone_markers]
PRJNA681933
|
ENA
Cite
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [mASPS_ChIP, ASPL_VCP_Pol2]
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [mASPS_ChIP, ASPL_VCP_Pol2]
PRJNA681928
|
ENA
Cite
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [Cell_lines_ChIP, ASPS1]
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [Cell_lines_ChIP, ASPS1]
PRJNA682022
|
ENA
Cite
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [mASPS_ChIP, histone_markers]
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [mASPS_ChIP, histone_markers]
PRJNA681927
|
ENA
Cite
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [hASPS_ChIP, ASPL_VCP_Pol2]
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [hASPS_ChIP, ASPL_VCP_Pol2]
PRJNA681932
|
ENA
Cite
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [Cell_lines_ChIP, FUUR1, 17934_FUUR1_KDs_H3K27ac]
ASPSCR1-TFE3 reprograms transcription by organizing enhancers around hexameric VCP [Cell_lines_ChIP, FUUR1, 17934_FUUR1_KDs_H3K27ac]
PRJNA681940
|
ENA
Cite
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