Bacillus methanolicus

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Genomics (30)
Unknown (29)
Transcriptomics (8)
Metabolomics (2)
Proteomics (2)

Organisms

Bacillus methanolicus (7)
Alphavirus (2)
Betaherpesvirinae (2)
Brassica oleracea var. oleracea (2)
Cowpox virus (2)
Coxsackievirus (2)
Cytomegalovirus (2)
Dengue virus (2)
EFO:0001352 (2)
Filoviridae (2)
Hepatitis B virus (2)
Human alphaherpesvirus 1 (2)
Human betaherpesvirus 5 (2)
Human immunodeficiency virus 1 (2)
Human immunodeficiency virus 2 (2)
Influenza A virus (2)
Influenza C virus (2)
Japanese encephalitis virus (2)
Japanese encephalitis virus group (2)
Lyssavirus rabies (2)
Monkeypox virus (2)
Nostoc sp. PCC 7120 = FACHB-418 (2)
Oropouche virus (2)
Orthopoxvirus (2)
Orthopoxvirus vaccinia (2)
Rattus (2)
Ruditapes decussatus (2)
Tick-borne encephalitis virus (2)
Viruses (2)
Bacillus methanolicus MGA3 (1)

Organisms

Bacillus methanolicus (21)
Bacillus methanolicus MGA3 (4)
Bacillus methanolicus PB1 (1)

Repository

ENA (30)
geo (5)
biostudies-arrayexpress (3)
MetaboLights (2)
pride (2)

Technology Type

Mass spectrometry (2)
Bottom-up proteomics (2)
Mass Spectrometry (2)

Instrument Platform

LTQ Orbitrap Classic (Thermo Scientific) (2)
Illumina HiSeq 1500 (1)

Publication Date

2014 (4)
2012 (2)
2025 (2)
2015 (2)
2021 (1)
2019 (1)

CHEBI ID

CHEBI:18272 (2)
CHEBI:27465 (2)
CHEBI:37713 (2)
CHEBI:17969 (2)
CHEBI:18199 (2)
CHEBI:16077 (2)
CHEBI:17052 (2)
CHEBI:17994 (2)
CHEBI:18319 (2)
CHEBI:18066 (2)
CHEBI:17013 (2)
CHEBI:15713 (2)
CHEBI:16264 (2)
CHEBI:17659 (2)
CHEBI:15721 (2)
CHEBI:48928 (2)
CHEBI:17050 (2)
CHEBI:16695 (2)
CHEBI:17533 (2)
CHEBI:52742 (2)
CHEBI:78682 (2)
CHEBI:15351 (2)
CHEBI:14314 (2)
CHEBI:15996 (2)
CHEBI:17552 (2)
CHEBI:15422 (2)
CHEBI:16027 (2)
CHEBI:16761 (2)
CHEBI:17345 (2)
CHEBI:80922 (1)

Metabolite Name

5'-phosphoribosyl-N-formylglycinamide (2)
5'-Thymidylic acid (2)
N-Acetyl-D-glucosamine 1,6-bisphosphate (2)
O-phospho-D-serine (2)
Shikimate-3-phosphate (2)
Sedoheptulose 1,7-bisphosphate (2)
Acetyl-CoA (2)
SAICAR (2)
5'-Guanylic acid (2)
Guanosine 5'-diphosphate (2)
UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-6-carboxy-L-lysyl-D-alanyl-D-alanine (2)
Uridine diphosphate glucose (2)
Ribose 1,5-bisphosphate (2)
Glucose-1-phosphate (2)
Uridine triphosphate (2)
Adenosine diphosphate (2)
Uridylic acid (2)
Adenosine 5'-monophosphate (2)
Sedoheptulose 7-phosphate (2)
Glucose-6 phosphate (2)
UDP-GlcNAc (2)
Adenosine triphosphate (2)
Guanosine triphosphate (2)
D-Fructose 1,6-bisphosphate (2)
N-Acetyl-L-glutamic acid (2)
Uridine 5'-diphosphate (2)
D-Ribose 5-phosphate (2)
6-phosphogluconic acid (2)
Uridine-5'-diphosphate-N-acetylmuramoyl-L-alanine (1)
Oxiglutatione (1)

First Public Date

2022 (10)
2025 (4)
2013 (4)
2014 (3)
2026 (2)
2017 (2)
2024 (1)
2021 (1)
2020 (1)
2019 (1)
2016 (1)

Study type

RNA-seq of coding RNA (2)
Transcription profiling by array (1)

Release Date

2021 (6)
2025 (4)
2020 (4)
2019 (3)
2014 (2)
2023 (2)
2015 (2)
2013 (2)
2012 (1)
2024 (1)
2018 (1)
2016 (1)
2009 (1)
2004 (1)
2003 (1)

Lab affiliation

Institute of Microbiology (2)

Tags

xref:PubMed:22610424 (4)
xref:PubMed:40505769 (1)
xref:PubMed:2111119 (1)
xref:PubMed:1380290 (1)
xref:PubMed:25152427 (1)
xref:PubMed:31417519 (1)

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Development of gene expression signatures in methylotrophic grown Bacillus methanolicus

A total gene expression approach was applied to study the methylotrophic nature of B. methanolicus by comparing the gene expression in bacteria grown methylotropic compared to non-methylotrophic. Genes of interest with different gene expression were quantified in the same RNA samples by real-time PC...

ORGANISM(S): Bacillus methanolicus

2012-05-22 | E-GEOD-35298 | biostudies-arrayexpress

Bacillus methanolicus

Bacillus methanolicus overview

PRJNA49643 | ENA

Proteomic analysis of the thermophilic methylotroph Bacillus methanolicus MGA3

Here, we established for the first time a proteomic analysis of B. methanolicus MGA3, and we used this approach to compare cells grown on methanol and mannitol at 50°C as well as cells grown on methanol at 37°C and 50°C. Bacillus methanolicus MGA3 is a facultative methylotroph of industrial relevanc...

ORGANISM(S): Bacillus methanolicus

2014-01-28 | PXD000637 | Pride