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MetabolomicsClay vs Glass: Root exudate recovery from two distinct microcosm systems

Plant roots host defined microbial communities that differ from those in the surrounding soil, and these communities shift dynamically in response to plant development and environmental changes. Whilst it is widely accepted that root exudates play a key role in the assembly and dynamics of root-a...

2026-09-16 | MTBLS14524 | MetaboLights
MetabolomicsGlass vs Clay: dynamic responses of the root exudate, root and shoot tissue metabolome upon SynCom colonisation

Plant roots host defined microbial communities that differ from those in the surrounding soil, and these communities shift dynamically in response to plant development and environmental changes. Whilst it is widely accepted that root exudates play a key role in the assembly and dynamics of root-a...

2026-09-16 | MTBLS14526 | MetaboLights
Genomicsexudate utilization
phytoplankton exudate utilization by bacteria
PRJEB44710 | ENA
UnknownThe Effect of Root Exudate 7,4'-Dihydroxyflavone and Naringenin on Soil Bacterial Community Structure.
Not available
S-EPMC4709137 | biostudies-literature
UnknownNitrogen and Nod factor signaling determine Lotus japonicus root exudate composition and bacterial assembly.
Not available
S-EPMC11039659 | biostudies-literature
TranscriptomicsG3P triggered changes in systemic transcriptome
Goal of this study was to determine changes in transcription profile in mock versus G3P treated plants. Arabidopsis (Col-0 ecotype) plants were infiltrated with petiole exudate, with or without G3P, and distal leaves were sampled 24 h post treatments. Keywords: Glycerol-3-Phosphate, Exudate, Salicy...
ORGANISM(S): Arabidopsis thaliana 
2011-03-15 | E-GEOD-26973 | biostudies-arrayexpress
UnknownFunctionalized Bacterial Cellulose Bottlebrush-Based Asymmetric Dressing for Effective Management of Wounds with Infection and Exudate.
Not available
S-EPMC11936004 | biostudies-literature
GenomicsJoller et al 2026 Glass bead-based microcosms enable simultaneous profiling of root exudate and microbiome dynamics
Joller et al 2026 Glass bead-based microcosms enable simultaneous profiling of root exudate and microbiome dynamics
PRJEB107228 | ENA
TranscriptomicsTranscriptomic response to concentrated pea root exudate
The secretion of metabolites by plant roots is a key determinant of microbial growth and colonisation. We have used Pisum sativum and its natural symbiont Rhizobium leguminosarum (it can form N2 fixing nodules on pea roots) to study the natural metabolites secreted by roots. To do this root secretio...
ORGANISM(S): Rhizobium leguminosarum 
2016-05-25 | E-MTAB-4790 | biostudies-arrayexpress
Genomics
Investigate the responses of soil bacterial communities to root exudate-induced priming effects
PRJNA1505487 | ENA
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