Baker Jacob J - OmicsDI

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Unknown (83)
Metabolomics (3)
Transcriptomics (1)

Organisms

Mus musculus (1)

Repository

MetaboLights (2)
biostudies-arrayexpress (1)
GNPS (1)

Technology Type

Mass spectrometry (2)

Instrument Platform

NextSeq 550 (1)
6520A Quadrupole Time-of-Flight LC/MS (1)
LTQ Orbitrap Velos (1)
LTQ Velos ETD (1)
Flow injection analysis MS - negative (1)
Flow injection analysis MS - positive (1)
Liquid Chromatography MS - alternating - hilic (1)

Publication Date

2024 (1)
2019 (1)
2023 (1)
2022 (1)

CHEBI ID

CHEBI:15741 (2)
CHEBI:16108 (2)
CHEBI:16199 (2)
CHEBI:16235 (2)
CHEBI:16335 (2)
CHEBI:16634 (2)
CHEBI:16708 (2)
CHEBI:16865 (2)
CHEBI:17306 (2)
CHEBI:17345 (2)
CHEBI:17858 (2)
CHEBI:17992 (2)
CHEBI:30744 (2)
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CHEBI:32816 (2)
CHEBI:10072 (1)
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CHEBI:14314 (1)
CHEBI:144330 (1)
CHEBI:15318 (1)
CHEBI:15344 (1)
CHEBI:15346 (1)
CHEBI:15351 (1)
CHEBI:15354 (1)

Metabolite Name

Adenine (2)
Adenosine (2)
Citric acid (2)
Guanine (2)
Succinic acid (2)
Sucrose (2)
Urea (2)
(4R)-4-Hydroxy-L-glutamic acid (1)
(R)-3-Hydroxybutyric acid (1)
(S)-3-Hydroxybutyric acid (1)
1,3-Diaminopropane (1)
1-Methyl-L-histidine (1)
1-Methylhistamine (1)
1-Methylnicotinamide (1)
2,3-Dihydroxypropanoic acid (1)
2,3-Dihydroxypropyl hexopyranoside (1)
2,3-Diphospho-D-glyceric acid (1)
2,3-Pyridinedicarboxylic acid (1)
2,5-Dihydroxybenzaldehyde (1)
2,5-Dihydroxybenzoic acid (1)
2-(Hydroxymethyl)butanoic acid (1)
2-Amino-3-methoxybenzoic acid (1)
2-Aminoadipic acid (1)
2-Deoxy-5-cytidylic acid (1)
2-Deoxy-D-ribonic acid (1)
2-Deoxy-D-ribose (1)
2-Deoxyadenosine (1)
2-Deoxyadenosine 5-triphosphate (1)
2-Deoxycytidine (1)
2-Deoxycytidine 5-diphosphate (1)

Study type

RNA-seq of coding RNA (1)

Release Date

2021 (18)
2022 (13)
2023 (12)
2024 (10)
2025 (7)
2020 (4)
2016 (4)
2026 (3)
2019 (3)
2018 (3)
2015 (2)
2012 (2)
2014 (1)
2013 (1)
2011 (1)

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Pancreatic cancer organoid

Organoids from KPC pancreatic tumor tissue was treated with growth medium or conditional medium of mast cells treated with WT or BAG6 KO EVS of Pan02.

ORGANISM(S): Mus musculus

2024-12-31 | E-MTAB-13570 | biostudies-arrayexpress

Metabolic signatures of Arabidopsis thaliana abiotic stress responses elucidate patterns in stress priming, acclimation, and recovery

Temperature, water and light are 3 abiotic stress factors that have major influences on plant growth, development and reproduction. Plants can be primed by a prior mild stress to enhance their resistance to future stress. We used an untargeted metabolomics approach to examine Arabidopsis thal...

2022-05-30 | MTBLS3672 | MetaboLights

A highly sensitive cell-based luciferase assay for high-throughput automated screening of SARS-CoV-2 nsp5/3CLpro inhibitors.

Not available

S-EPMC8722588 | biostudies-literature

Telomere Roles in Fungal Genome Evolution and Adaptation.

Not available

S-EPMC8381367 | biostudies-literature

A highly sensitive cell-based luciferase assay for high-throughput automated screening of SARS-CoV-2 nsp5/3CLpro inhibitors.

Not available

S-EPMC8906008 | biostudies-literature

GNPS - From plants to ants: Evaluating lipidomic changes in leaf-cutter ant fungus gardens

Leaf-cutter ants use fresh plant material to cultivate an obligate mutualistic fungus Leucoagaricus gongylophorus in specialized fungus gardens to access and transform nutrients from plant biomass that would otherwise be unavailable to the ants. Here, we evaluated the lipidomic differences between t...

ORGANISM(S): Environmental Samples <bacteria> (ncbitaxon:48479)

2019-10-30 | MSV000084520 | GNPS

Sensitivity to Neutralizing Antibodies and Resistance to Type I Interferons in SARS-CoV-2 R.1 Lineage Variants, Canada.

Not available

S-EPMC10310370 | biostudies-literature

Efficacy and Safety of the mRNA-1273 SARS-CoV-2 Vaccine.

Not available

S-EPMC7787219 | biostudies-literature

Placental DNA methylation signatures of maternal smoking during pregnancy and potential impacts on fetal growth.

Not available

S-EPMC8384884 | biostudies-literature

Comparative Metabolomics and Molecular Phylogenetics of Melon (Cucumis melo, Cucurbitaceae) Biodiversity.