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Unknown
(1584)
Transcriptomics
(655)
Proteomics
(206)
Genomics
(64)
Metabolomics
(59)
Other
(4)
Multiomics
(3)
Organisms
Homo sapiens
(456)
Mus musculus
(225)
Rattus norvegicus
(33)
Drosophila melanogaster
(31)
Arabidopsis thaliana
(24)
Saccharomyces cerevisiae
(16)
Bos taurus
(7)
Escherichia coli
(7)
Sus scrofa
(6)
Danio rerio
(6)
Schizosaccharomyces pombe
(5)
Campylobacter jejuni
(3)
Salmonella enterica subsp. enterica serovar Typhimurium
(3)
Caenorhabditis elegans
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Macaca mulatta
(2)
Oryza sativa Indica Group
(2)
Apis mellifera
(2)
Zea mays
(2)
Pseudomonas aeruginosa
(2)
Nitrobacter winogradskyi
(1)
Coryphaena hippurus
(1)
Cameraria ohridella
(1)
Bursaphelenchus xylophilus
(1)
Capsicum annuum var. glabriusculum
(1)
Apostichopus japonicus
(1)
Saccharomyces cerevisiae W303
(1)
Francisella tularensis subsp. tularensis SCHU S4
(1)
Capra hircus
(1)
Solanum habrochaites
(1)
Cervus nippon
(1)
Organisms
Mus musculus
(4)
Cucumis sativus var. sativus
(1)
Arabidopsis thaliana
(1)
Repository
biostudies-arrayexpress
(710)
pride
(191)
MetaboLights
(59)
MassIVE
(9)
ENA
(9)
jPOST
(7)
EGA
(3)
geo
(1)
GPMDB
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iProX
(1)
Tissue
Cell culture
(21)
Epithelial cell
(10)
Permanent cell line cell
(10)
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(8)
Colon
(7)
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(6)
Leaf
(6)
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(5)
Cell suspension culture
(5)
Lung
(5)
Blood
(4)
Blood plasma
(4)
Fibroblast
(4)
Macrophage
(4)
Skin
(4)
Spleen
(4)
Blood serum
(3)
Embryo
(3)
HeLa cell
(3)
Heart
(3)
Ovary
(3)
Urine
(3)
Cerebrospinal fluid
(2)
Embryonic stem cell
(2)
Kidney
(2)
Kidney cell line
(2)
Liver
(2)
Melanocyte
(2)
Pancreatic cancer cell line
(2)
Photosynthetic cell
(2)
Disease
Colon cancer
(4)
Disease free
(4)
Breast cancer
(3)
Acute leukemia
(3)
Renal cell carcinoma
(3)
Porphyria NOS
(2)
Neuroblastoma
(2)
Congenital disorder of glycosylation
(2)
Melanoma
(2)
Pancreatic cancer
(2)
High grade glioblastoma
(1)
Not applicable
(1)
Squamous cell carcinoma has accession C0007137 in DiseaseStateDatabase NCI_Thesaurus
(1)
Erythroleukemia
(1)
Chronic infection with geohelminth ascaris lumbricoides
(1)
Dukes D primary colon cancer
(1)
Lung large cell carcinoma
(1)
Colon cancer metastasis
(1)
Malignant melanoma
(1)
None- acute control
(1)
Leukemia
(1)
Normal
(1)
Head and neck squamous cell carcinoma
(1)
Benign adenoma
(1)
Chronic lymphocytic leukemia
(1)
Reference
(1)
Mammary tumor
(1)
None- Acute Control
(1)
Normal
(1)
Not Available
(1)
Technology Type
Mass Spectrometry
(191)
Shotgun proteomics
(89)
Mass spectrometry
(53)
Affinity purification coupled with mass spectrometry proteomics
(40)
Bottom-up proteomics
(37)
Data-dependent acquisition
(22)
Data-independent acquisition
(13)
Top-down proteomics
(9)
Chemical cross-linking coupled with mass spectrometry proteomics
(8)
Gel-based experiment
(8)
Mass spectrometry assay
(4)
Immunopeptidomics
(4)
NMR spectroscopy
(3)
MSE
(2)
Mass spectrometry imaging
(2)
SRM/MRM
(2)
Illumina HiSeq 2000
(1)
Affinity proteomics
(1)
All-ion fragmentation
(1)
HDMSE
(1)
Instrument Platform
Illumina NovaSeq 6000
(9)
Illumina HiSeq 2000
(8)
Illumina HiSeq 2500
(5)
AB SOLiD 4 System
(4)
Vortex
(3)
Illumina HiSeq 4000
(3)
NextSeq 500
(3)
ScanArray Express HT [PerkinElmer]
(2)
GenePix 4000B [Axon Instruments]
(2)
Impact II
(2)
LTQ Orbitrap Velos
(2)
Illumina HiSeq 2000 platform
(1)
Microarray scanner system
(1)
Agilent 2100 bioanalyzer
(1)
NanoDrop ND-1000
(1)
Beadarray reader
(1)
ArrayWoRx Multi-Format Reader [Applied Precision]
(1)
Scanning of was performed on an Axon 4000B scanner
(1)
Affymetrix Genechip Command Console software
(1)
Trizol Reagent
(1)
454 GS FLX+
(1)
GeneChip Scanner 3000 [Affymetrix]
(1)
Illumina Genome Analyzer IIx
(1)
Scanning hardware
(1)
Nanodrop
(1)
NextSeq 2000
(1)
DNBSEQ-G400
(1)
Illumina MiSeq
(1)
NextSeq 550
(1)
Instrument
(1)
Publication Date
2012
(108)
2013
(102)
2015
(86)
2014
(84)
2010
(75)
2011
(60)
2016
(55)
2025
(50)
2023
(36)
2005
(36)
2022
(32)
2017
(32)
2026
(31)
2018
(31)
2024
(26)
2009
(26)
2020
(23)
2021
(22)
2019
(21)
2008
(16)
2007
(12)
2006
(12)
2004
(1)
2003
(1)
CHEBI ID
CHEBI:28044
(10)
CHEBI:17015
(8)
CHEBI:18186
(8)
CHEBI:27897
(8)
CHEBI:16704
(7)
CHEBI:24898
(7)
CHEBI:27570
(7)
CHEBI:30769
(7)
CHEBI:15354
(6)
CHEBI:15891
(6)
CHEBI:16811
(6)
CHEBI:16856
(6)
CHEBI:17368
(6)
CHEBI:17509
(6)
CHEBI:17822
(6)
CHEBI:26271
(6)
CHEBI:29016
(6)
CHEBI:15318
(5)
CHEBI:16196
(5)
CHEBI:16335
(5)
CHEBI:16750
(5)
CHEBI:17154
(5)
CHEBI:17405
(5)
CHEBI:17568
(5)
CHEBI:17929
(5)
CHEBI:18012
(5)
CHEBI:18211
(5)
CHEBI:21547
(5)
CHEBI:24813
(5)
CHEBI:25094
(5)
Metabolite Name
Choline
(7)
Adenosine
(6)
Creatine
(5)
Creatinine
(5)
Oleamide
(5)
2-Methylbutyroylcarnitine
(4)
4-Hydroxybenzaldehyde
(4)
Betaine
(4)
Cytidine
(4)
Cytosine
(4)
Glycerophosphocholine
(4)
Histamine
(4)
L-Tryptophan
(4)
Linoleic acid
(4)
Thymine
(4)
Trigonelline
(4)
1-Oleoyl-sn-glycero-3-phosphocholine
(3)
1-Palmitoyl-sn-glycero-3-phosphocholine
(3)
2-Hydroxycinnamic acid
(3)
5-Methylcytosine
(3)
Adipic acid
(3)
Alanine
(3)
Argininosuccinic acid
(3)
Citrulline
(3)
Cyclohexylamine
(3)
D-Aspartic acid
(3)
Deoxycytidine
(3)
Ergothioneine
(3)
Heptadecanoic acid
(3)
Histidine
(3)
First Public Date
2014
(3)
2019
(2)
2025
(1)
2023
(1)
2020
(1)
2015
(1)
Modification
Not available
(1)
Study type
Transcription profiling by array
(453)
RNA-seq of coding RNA
(47)
ChIP-seq
(43)
RNA-seq of non coding RNA
(40)
ChIP-chip by tiling array
(17)
MicroRNA profiling by array
(16)
Transcription profiling by tiling array
(15)
Other
(15)
Transcription profiling by RT-PCR
(13)
ChIP-chip by array
(7)
Comparative genomic hybridization by array
(6)
Methylation profiling by high throughput sequencing
(6)
Methylation profiling by array
(5)
Unknown experiment type
(4)
RNA-seq of coding RNA from single cells
(4)
Single nucleus RNA sequencing
(3)
DNA-seq
(3)
Genotyping by array
(2)
Animal - Two-color microarray
(1)
MicroRNA profiling by high-throughput sequencing
(1)
Cell line - One-color microarray
(1)
MicroRNA profiling by high throughput sequencing
(1)
Hi-C
(1)
Exome sequencing
(1)
CUT&RUN
(1)
RNA-seq of total RNA
(1)
Release Date
2021
(168)
2015
(162)
2024
(161)
2023
(161)
2022
(159)
2013
(147)
2025
(142)
2014
(142)
2012
(140)
2016
(117)
2020
(116)
2019
(114)
2010
(99)
2018
(97)
2017
(94)
2011
(86)
2009
(52)
2005
(40)
2026
(26)
2008
(26)
2007
(20)
2006
(16)
2004
(3)
2003
(2)
2000
(1)
2001
(1)
1999
(1)
1997
(1)
Lab affiliation
Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany
(41)
Farnusch Kaschani, Analytics Core Facility Essen (ACE), Chemische Biologie, Universität Duisburg-Essen, ZMB, Germany
(7)
Institute of microbiology, University of Greifswald
(4)
Dept. Oncology-Pathology, Scilifelab, Karolinska Institutet, Sweden
(3)
1VIB-UGent Center for Medical Biotechnology, VIB, 9052 Ghent, Belgium 2Department of Biomolecular Medicine, Ghent University, 9052 Ghent, Belgium
(2)
Dep. of Oncology-Pathology, Karolinska Institutet, Scilifelab, Stockholm, Sweden
(2)
Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel
(2)
Department of Molecular Medicine, The Scripps Research Institute, Jupiter, FL 33458, USA.
(2)
German Cancer Research Center Heidelberg University Clinic Heidelberg
(2)
Laboratoire Protéomique, Réponse Inflammatoire et Spectrométrie de Masse (PRISM) - INSERM U1192 - Université Lille 1, Bât SN3, 1er étage, Cité Scientifique, F-59655 Villeneuve d’Ascq Cedex
(2)
Macquarie University
(2)
Nuffield Department of Medicine
(2)
Universitat Internacional de Catalunya, Barcelona, Spain.
(2)
- Department of Oncology, University of Torino Medical School, Torino, Italy. - Candiolo Cancer Institute, FPO - IRCCS, Candiolo, Torino, Italy.
(1)
1, Westlake Center for Intelligent Proteomics, Westlake Laboratory of Life Sciences and Biomedicine, Hangzhou, Zhejiang Province, 310030, China 2, School of Medicine, School of Life Sciences, Westlake University, Hangzhou, Zhejiang Province, 310030, China 3, Research Center for Industries of the Future, Westlake University, 600 Dunyu Road, Hangzhou, Zhejiang, 310030, China
(1)
1BHF Centre of Research Excellence, Division of Cardiovascular Medicine, Radcliffe Department of Medicine, John Radcliffe Hospital, University of Oxford, UK
(1)
1VIB Center for Medical Biotechnology (CMB), Ghent, 2Belgium Department of Biomolecular Medicine, Ghent University, Ghent, Belgium, 3Cancer Research Institute Ghent (CRIG), Ghent, Belgium.
(1)
Aix Marseille Univ, CNRS, BIP, UMR7281, IMM, FR3479
(1)
Aix-Marseille Univ, CNRS,FR3479, Proteomics facility of Institut de Microbiologie de la Mediterranee, Marseille Proteomique, Marseille, France
(1)
Analytics Core Facility Essen, Chemische Biologie, Zentrum für Medizinische Biotechnologie, Fakultät für Biologie, Universität Duisburg-Essen, Universitätsstr. 2, 45117 Essen, Germany
(1)
Associate professor, Department of Biomedical laboratory sciences and chemical engineering, Bergen University College, Bergen, Norway.
(1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Science, University of Utrecht, Padualaan 8, Utrecht, 3584 CH, The Netherlands
(1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands. Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands
(1)
Biotech Research and Innovation Centre (BRIC) University of Copenhagen, Copenhagen, Denmark
(1)
CNIO
(1)
Canada's Michael Smith Genome Sciences Centre, BC Cancer Agency, Vancouver V5Z 1L3, Canada.
(1)
Cancer Research UK Cambridge Institute University of Cambridge United Kingdom
(1)
Center for Mass Spectrometry and Optical Spectroscopy (CeMOS), Mannheim University of Applied Sciences, Paul-Wittsack-Str. 10, 68163 Mannheim, Germany
(1)
Center of Systems Biology, Biomedical Research Foundation, Academy of Athens, Greece
(1)
Centre for Genomics and Computational Biology, Barts Cancer Institute, Queen Mary University of London
(1)
Tags
xref:PubMed:24767545
(2)
xref:PubMed:31262724
(1)
xref:PubMed:30058228
(1)
xref:PubMed:37463901
(1)
xref:PubMed:24591624
(1)
xref:PubMed:26458175
(1)
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Direct interaction of actin filaments with F-BAR protein pacsin2.
Not available
S-EPMC4253489
|
biostudies-literature
Cite
Purification, crystallization and preliminary X-ray analysis of the inverse F-BAR domain of the human srGAP2 protein.
Not available
S-EPMC3943097
|
biostudies-literature
Cite
The state of F-BAR domains as membrane-bound oligomeric platforms.
Not available
S-EPMC8286294
|
biostudies-literature
Cite
Membrane sculpting by F-BAR domains studied by molecular dynamics simulations.
Not available
S-EPMC3561051
|
biostudies-literature
Cite
Formation of membrane ridges and scallops by the F-BAR protein Nervous Wreck.
Not available
S-EPMC3727933
|
biostudies-literature
Cite
The F-BAR domain of srGAP2 induces membrane protrusions required for neuronal migration and morphogenesis.
Not available
S-EPMC2797480
|
biostudies-literature
Cite
Comparison of Saccharomyces cerevisiae F-BAR domain structures reveals a conserved inositol phosphate binding site.
Not available
S-EPMC4319572
|
biostudies-literature
Cite
Assembly of actin filaments and microtubules in Nwk F-BAR-induced membrane deformations.
Not available
S-EPMC4594231
|
biostudies-literature
Cite
Coordinated autoinhibition of F-BAR domain membrane binding and WASp activation by Nervous Wreck.
Not available
S-EPMC5035868
|
biostudies-literature
Cite
Sequential recruitment of F-BAR proteins controls cytoskeletal crosstalk at the yeast bud neck.
Not available
S-EPMC11794016
|
biostudies-literature
Cite
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