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Polymerase Run-On Sequencing (PROseq) performed as previously described (cite original Kwak et al., 2013 and qPRO Judd et al., 2020) with some minor changes. Data is obtained from two F1 hybrid embryonic stem cells (ES) obtained by crossing C57BL/6NJ with CAST/EiJ and SPRET/EiJ, respectively. The re...
ORGANISM(S): Mus musculus 
To confirm the loss of transcription factor (TF) occupancy at SNP-containing motifs, we performed ChIP-seq for three TFs in the Bl6xSpret hybrid mESC line. This dataset includes cross-link ChIP-seq data for CTCF, KLF4, and SOX2. Two biological replicates were generated for each TF. The protocol wa...
ORGANISM(S): Mus musculus 
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