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TranscriptomicsExpression Profiling of Arabidopsis Long Intergenic Nongcoding RNA in Inflorescences, Leaves, and Roots
Long intergenic noncoding RNAs (lincRNA) transcribed from intergenic regions of eukaryotic genomes play important roles in key biological processes; yet, plant lincRNAs remain poorly characterized. Here we profiled lincRNA expression in inflorescences, leaves and roots using ATH lincRNA v1 array. we...
ORGANISM(S): Arabidopsis thaliana 
2011-08-05 | E-GEOD-30394 | biostudies-arrayexpress
TranscriptomicsIdentification of Arabidopsis Long Intergenic Noncoding RNA regulated by RNA-dependent RNA polymerase 2 (RDR2)
RNA-dependent RNA polymerase 2 (RDR2) is a crucial regulator of RNA-directed DNA methylation (RdDM). Recentily RDR2 was reported to regulate expression of long intergenic noncoding RNAs. Here we used ATH lincRNA v1 expression arrays to compare lincRNA expression in inflorescence tissues of rdr2-1 an...
ORGANISM(S): Arabidopsis thaliana 
2011-08-05 | E-GEOD-30395 | biostudies-arrayexpress
TranscriptomicsLong Intergenic Noncoding RNAs regulated by SERRATE, CBP20 and CBP80
Long intergenic noncoding RNAs (lincRNAs) transcribed from intergenic regions play important roles in key biological processes.Analysis of published transcriptom datasets suggested some lincRNAs may be regulated by SERRATE,CBP20 and CBP80 in Arabidopsis. To further investigate the regulation, we use...
ORGANISM(S): Arabidopsis thaliana 
2012-09-29 | E-GEOD-35963 | biostudies-arrayexpress
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