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TranscriptomicsSuppressor of cytokine signaling-1 influences bacterial clearance and pathology during the infection with Mycobacterium tuberculosis
Tuberculosis results from an interaction between a chronically persistent pathogen counteracted by IFN-g-mediated immune responses. Modulation of IFN-g signaling could therefore constitute a major immune evasion mechanism for M. tuberculosis. SOCS1 plays a major role in the inhibition of IFN-g-media...
ORGANISM(S): Mus musculus 
2012-01-18 | E-GEOD-23508 | biostudies-arrayexpress
TranscriptomicsTranscriptome of Dinoroseobacter shibae in co-culture with the dinoflagellate Prorocentrum minimum [RNA-seq]
Transcriptome of D. shibae 5 h in the light after 12 days in co-culture with the dinoflagellate P. minimum. Two biological replicates.
ORGANISM(S): Dinoroseobacter shibae DFL 12 = DSM 16493 
2014-02-01 | E-GEOD-53871 | biostudies-arrayexpress
TranscriptomicsLight-dark changes in the transcriptome of Dinoroseobacter shibae in co-culture with the dinoflagellate Prorocentrum minimum
Comparison of the transcriptome of D. shibae 5 h in the light versus 5 h in the dark after 12 days in co-culture with the dinoflagellate P. minimum. Two biological replicates of each condition are compared.
ORGANISM(S): Dinoroseobacter shibae DFL 12 = DSM 16493 
2014-02-01 | E-GEOD-53846 | biostudies-arrayexpress
TranscriptomicsTranscriptome of Dinoroseobacter shibae in co-culture with the dinoflagellate Prorocentrum minimum at different growth stages
Transcriptome of D. shibae 5 h in the light after 18,24 and 30 days in coculture with the dinoflagellate P. minimum two biological replicates
ORGANISM(S): Dinoroseobacter shibae DFL 12 = DSM 16493 
2014-05-01 | E-GEOD-55371 | biostudies-arrayexpress
TranscriptomicsTranscriptome of Dinoroseobacter shibae under changeing light regimes
D. shibae was cultivated under changing light regimes and samples for transcriptome and metabolome were taken. Two independent cultivations in a Chemostat have been performed. Each reactor was run for 3 light/dark-cycles of 12h/12h. Sampling started from the second cycle and continued to the third c...
ORGANISM(S): Dinoroseobacter shibae DFL 12 = DSM 16493 
2014-07-01 | E-GEOD-57164 | biostudies-arrayexpress
TranscriptomicsThe activation of IL-1-induced enhancers depends on TAK1 kinase activity and NF-kappaB p65 II
The inflammatory gene response requires activation of the protein kinase TAK1, but it is currently unknown how TAK1-derived signals coordinate transcriptional programs in the genome. We determined the genome-wide binding of the TAK1-controlled NF-M-NM-:B subunit p65 in relation to active enhancers a...
ORGANISM(S): Homo sapiens 
2014-12-17 | E-GEOD-64237 | biostudies-arrayexpress
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