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Transcriptomics[E-MTAB-599] Mouse Transcriptome
Sequencing the transcriptome of DBAxC57BL/6J mice. To study the regulation of transcription, splicing and RNA turnover we have sequenced the transcriptomes of tissues collected DBAxC57BL/6J mice. We strongly encourage researchers to contact us if there is any queries about referencing or publishing ...
ORGANISM(S): Mus musculus 
2011-07-14 | GSE30617 | GEO
Methylation profiling[E-TABM-482] DNA methylome of human spermatozoa
Genome-wide DNA methylation profile of human spermatozoa using the meDIP technique and massively parallel sequencing. DNA methylation is an indispensible epigenetic modification required for regulating the expression of mammalian genomes. Immunoprecipitation-based methods for DNA methylome analysis ...
ORGANISM(S): Homo sapiens 
2011-02-05 | GSE25686 | GEO
GenomicsCell-type specific and combinatorial usage of diverse transcription factors revealed by genome-wide binding studies in multiple human cells [new ChIP-Seq samples]
Cellular diversity in a multicellular organism like the human is achieved in part by distinct programs of gene expression at the level of transcription, which in turn are mediated by transcription factors (TFs). However, there are few systematic studies of the genomic binding of different types of T...
ORGANISM(S): Homo sapiens 
2011-10-18 | E-GEOD-32692 | biostudies-arrayexpress
GenomicsOpen chromatin defined by DNaseI and FAIRE identifies regulatory elements that shape cell-type identity [ChIP_seq].
The human body contains thousands of unique cell types, each with specialized functions. Cell identity is governed in large part by gene transcription programs, which are determined by regulatory elements encoded in DNA. To identify regulatory elements active in seven cell lines representative of di...
ORGANISM(S): Homo sapiens 
2011-06-29 | E-GEOD-30226 | biostudies-arrayexpress
UnknownGARFIELD classifies disease-relevant genomic features through integration of functional annotations with association signals.
Not available
S-EPMC6908448 | biostudies-literature
TranscriptomicsPig transcriptome and gene expression atlas
RNA sequencing of pig tissues for transcriptome annotation and expression analysis. Tissue specific RNA-seq data was generated to support annotation of coding and non-coding genes and to measure tissue specific expression. This study is part of the FAANG project, promoting rapid prepublication of da...
ORGANISM(S): Sus scrofa 
2017-02-10 | E-MTAB-5895 | biostudies-arrayexpress
UnknownLearning the natural history of human disease with generative transformers.
Not available
S-EPMC12589094 | biostudies-literature
UnknownGenomic and phenotypic characterization of a wild medaka population: towards the establishment of an isogenic population genetic resource in fish.
Not available
S-EPMC3962483 | biostudies-literature
GenomicsMus musculus
[E-MTAB-599] Mouse Transcriptome
PRJNA144529 | ENA
UnknownModular control of vertebrate axis segmentation in time and space.
Not available
S-EPMC11405765 | biostudies-literature
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