Bivalves - OmicsDI

Show results for

Unknown (758)
Genomics (223)
Transcriptomics (161)
Proteomics (48)
Metabolomics (20)
Other (1)

Organisms

Mus musculus (69)
Homo sapiens (34)
Mytilus galloprovincialis (15)
Danio rerio (10)
Mytilus edulis (7)
Gallus gallus (4)
Rattus norvegicus (4)
Mytilus californianus (3)
Pinctada maxima (3)
Xenopus laevis (2)
Ruditapes philippinarum (2)
Bos taurus (2)
Sinocyclocheilus anophthalmus (1)
Ruditapes decussatus (1)
Calyptogena magnifica symbiont (1)
Citrus trifoliata (1)
Coregonus clupeaformis (1)
Lens ervoides (1)
Bathymodiolus azoricus (1)
Arabidopsis lyrata (1)
Daphnia pulex (1)
Malus domestica (1)
Vitis vinifera (1)
Arabidopsis thaliana (1)
Digitaria exilis (1)
Rapana venosa (1)
Margaritifera margaritifera (1)
Pinctada margaritifera (1)
Neptunea cumingii (1)
Pteria penguin (1)

Organisms

Ruditapes philippinarum (5)
Margaritifera margaritifera (3)
Anadara tuberculosa (3)
Mytilus galloprovincialis (3)
mollusc metagenome (3)
marine metagenome (3)
Saccostrea cuccullata (2)
Mytilus planulatus (2)
Teredinibacter turnerae (2)
Pinctada maxima (2)
Azumapecten farreri (2)
Crassostrea virginica (2)
Mytilus edulis (2)
Dreissena polymorpha (2)
freshwater metagenome (2)
Escherichia coli (2)
Congeria kusceri (1)
Unio delphinus (1)
Teredinibacter turnerae T8415 (1)
Pseudomonas sp. 1208-05 (1)
Pseudomonas sp. 1208-03 (1)
Shewanella sp. 1208-4 (1)
Shewanella sp. 1180-9 (1)
Shewanella sp. 1151-6 (1)
Shewanella sp. 1151-3 (1)
Shewanella sp. 867-19 (1)
Shewanella sp. D1-S13 (1)
Stenotrophomonas sp. 861-20 (1)
Stenotrophomonas sp. 1125-12 (1)
Stenotrophomonas sp. 1125-20 (1)

Repository

ENA (216)
biostudies-arrayexpress (157)
MassIVE (27)
MetaboLights (20)
pride (11)
geo (8)
iProX (4)
EGA (3)
jPOST (3)
EVA (1)
PanoramaPublic (1)
PAXDB (1)
PeptideAtlas (1)

Tissue

Gill (2)
Whole body (2)
Eye (1)
Digestive gland (1)
Mantle (1)

Disease

Cataract (1)
Normal (1)

Technology Type

Mass spectrometry (14)
Mass Spectrometry (11)
Shotgun proteomics (9)
NMR spectroscopy (7)
Mass spectrometry assay (1)
Gel-based experiment (1)
Data-dependent acquisition (1)

Instrument Platform

Illumina NovaSeq 6000 (6)
TSQ Quantiva (6)
Q Exactive (4)
NextSeq 500 (3)
LTQ Orbitrap Elite (3)
Nuclear Magnetic Resonance (NMR) - (3)
Genewiz library construction hardware (2)
Centrifuge, RNeasy Kit (Qiagen) (2)
NextSeq 550 (2)
Illumina HiSeq 2500 (2)
Orbitrap Astral (2)
LTQ Orbitrap Velos (2)
Orbitrap Fusion (2)
Orbitrap Exploris 480 (2)
Orbitrap Exploris 240 (2)
LCQ Classic (2)
Scalpel, dry ice (1)
Scalpel, dry ice. (1)
GenePix 4100A (Molecular Device) (1)
Axon GenePix4000B (1)
Illumina Genome Analyzer II (1)
Illumina NovaSeq X (1)
Nanodrop (1)
NextSeq 2000 (1)
Thermo Fusion Lumos (1)
QSTAR (1)
LTQ (1)
Orbitrap Eclipse (1)
Q Exactive HF (1)
Orbitrap Fusion Lumos (1)

Publication Date

2013 (26)
2011 (25)
2015 (18)
2014 (18)
2010 (17)
2022 (16)
2012 (15)
2008 (11)
2024 (10)
2020 (10)
2019 (10)
2025 (9)
2017 (8)
2016 (6)
2009 (6)
2026 (5)
2023 (5)
2007 (4)
2018 (4)
2021 (3)
2005 (1)
2004 (1)

UNIPROT ID/AC

KI2L3_HUMAN (1)
9606.ENSP00000482816 (1)
WIF1_HUMAN (1)
ZN613_HUMAN (1)
CXD2_HUMAN (1)
OCSTP_HUMAN (1)
B2L12_HUMAN (1)
NTM1B_HUMAN (1)
CRBA4_HUMAN (1)
XLRS1_HUMAN (1)
CRGC_HUMAN (1)
GPX6_HUMAN (1)
CRYGS_HUMAN (1)
9606.ENSP00000477056 (1)
ZIC5_HUMAN (1)
ADAT1_HUMAN (1)
CRYA2_HUMAN (1)
CRBA1_HUMAN (1)
OPT_HUMAN (1)
NALP4_HUMAN (1)
OD3L2_HUMAN (1)
PPR42_HUMAN (1)
MDM4_HUMAN (1)
CRBB3_HUMAN (1)
CRGA_HUMAN (1)
ANR53_HUMAN (1)
KI2L1_HUMAN (1)
THAP3_HUMAN (1)
PROX2_HUMAN (1)
GSDMC_HUMAN (1)

CHEBI ID

CHEBI:15428 (7)
CHEBI:16449 (7)
CHEBI:18132 (6)
CHEBI:17126 (6)
CHEBI:25017 (6)
CHEBI:15741 (6)
CHEBI:17750 (6)
CHEBI:15891 (6)
CHEBI:16027 (6)
CHEBI:17822 (5)
CHEBI:22653 (5)
CHEBI:16811 (5)
CHEBI:27266 (5)
CHEBI:29016 (5)
CHEBI:16704 (5)
CHEBI:16761 (5)
CHEBI:78320 (5)
CHEBI:16919 (5)
CHEBI:27897 (5)
CHEBI:17858 (4)
CHEBI:16856 (4)
CHEBI:27570 (4)
CHEBI:30751 (4)
CHEBI:18186 (4)
CHEBI:26986 (4)
CHEBI:28300 (4)
CHEBI:18257 (4)
CHEBI:24898 (4)
CHEBI:17268 (4)
CHEBI:28044 (4)

Metabolite Name

ADP (5)
Phosphocholine (4)
AMP (4)
Creatine (4)
Alanine (4)
Glycine (4)
Glutathione disulfide (3)
Gamma-glutamyltryptophan (3)
Ergothioneine (3)
Deoxycarnitine (3)
Glutathione (3)
Uridine (3)
UDP (3)
Taurine (3)
Serine (3)
Carnosine (3)
Carnitine (3)
ATP (3)
Asparagine (3)
Arginine (3)
Histidine (3)
Threonine (3)
Choline (3)
Lactate (3)
Valine (3)
Leucine (3)
Myo-inositol (3)
Creatine (3)
Tryptophan (3)
CoA-glutathione (2)

First Public Date

2023 (46)
2026 (33)
2025 (24)
2024 (23)
2013 (17)
2022 (16)
2019 (14)
2020 (9)
2018 (8)
2021 (7)
2017 (7)
2014 (5)
2016 (4)
2015 (3)

Classification

bacteria (11)

Study type

Transcription profiling by array (119)
RNA-seq of coding RNA (17)
RNA-seq of total RNA (3)
Unknown experiment type (2)
Comparative genomic hybridization by array (2)
ChIP-seq (2)
Methylation profiling by array (2)
RNA-seq of coding RNA from single cells (2)
RNA-seq of non coding RNA (2)
Plant - High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
RIP-seq (1)
Other (1)
MicroRNA profiling by array (1)
Proteomic profiling by array (1)

Release Date

2022 (80)
2024 (77)
2023 (77)
2020 (70)
2025 (61)
2018 (59)
2019 (58)
2021 (54)
2017 (52)
2016 (48)
2014 (45)
2013 (45)
2015 (43)
2012 (37)
2011 (36)
2010 (23)
2008 (13)
2009 (12)
2007 (10)
2026 (5)
2006 (4)
2004 (2)
2005 (1)
2003 (1)
2002 (1)
2000 (1)

Lab affiliation

Biogenouest Proteomics Core Facility -IREST INSERM U1085 - Rennes, France (1)
Symbiosis Department, Max Planck Institute for Marine Microbiology, Bremen, Germany (1)
Universidade de Vigo (1)
Section of Geobiology, The Globe Institute, Faculty of Health and Medical Sciences, University of Copenhagen (1)
University of Vienna, Division of Microbial Ecology (1)
Institute of Oceanology, Chinese Academy of Sciences (1)
Protim - Irset Inserm U1085 (1)
Medical Malacology, Theodore Bilharz Research Institute, Giza, Egypt (1)
Universität Greifswald Institut für Pharmazie, AG Pharmazeutische Biotechnologie Greifswald, Germany (1)
CEA-Marcoule, ProGenoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Ceze, France (1)
university of edinburgh (1)

Previous page
1 / 122
You're on page 1
page 2
page 3
page 4
page 5
page ...
page 122
Next page

Sort by:

Relevance

Page size

Spatial metabolomics shows contrasting phosphonolipid distributions in tissues of marine bivalves

Lipids are an integral part of cellular membranes, vary between species, and allow cells to alter stiffness, permeability and curvature. Among lipids, phosphonolipids uniquely contain a phosphonate bond between carbon and phosphorous. Despite this distinctive biochemical characteristic, few model...

2022-06-26 | MTBLS2960 | MetaboLights

STEC-bivalves

Isolation and characterisation of Shiga toxin-producing Escherichia coli from Norwegian bivalves

PRJEB29102 | ENA

Invading bivalves replaced native Mediterranean bivalves, with little effect on the local benthic community.

Not available

S-EPMC9764321 | biostudies-literature

gill symbiotic bacteria of bivalves

PRJNA1470702 | ENA

Amplicon Sequencing of Bivalves Infected with Intracellular Microcolonies

PRJNA615791 | ENA

Chemosymbiotic bivalves contribute to the nitrogen budget of seagrass ecosystems.