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TranscriptomicsmRNA degradation in Mycobacterium tuberculosis
This SuperSeries is composed of the following subset Series: GSE36341: mRNA degradation in Mycobacterium tuberculosis under aerobic conditions GSE36342: mRNA degradation in Mycobacterium smegmatis under aerobic conditions GSE36343: mRNA degradation in Mycobacterium tuberculosis during cold and hypox...
ORGANISM(S): Mycobacterium tuberculosis H37Rv 
2012-03-08 | E-GEOD-36345 | biostudies-arrayexpress
TranscriptomicsmRNA degradation in Mycobacterium tuberculosis during cold and hypoxic stress
Transcription was arrested using 50 ug/ul of rifampin leaving RNA degradation as the sole vector responsible for mRNA abundance at 20C (cold) or in 0.2%O2 (hypoxia). mRNA half-lives were calculated from the decay of signal intensity from T0. Three replicates were sampled after 0, 1, 2, and 5 hours o...
ORGANISM(S): Mycobacterium tuberculosis H37Rv 
2012-03-08 | E-GEOD-36343 | biostudies-arrayexpress
TranscriptomicsmRNA degradation in Mycobacterium tuberculosis with DosR ectopically induced
After induction of DosR from a tet regulated promoter (uninduced controls were treated with an equivalent ammount of the solvent, DMSO), transcription was arrested using 50 ug/ul of rifampin leaving RNA degradation as the sole vector responsible for mRNA abundance. mRNA half-lives were calculated fr...
ORGANISM(S): Mycobacterium tuberculosis H37Rv 
2012-03-08 | E-GEOD-36344 | biostudies-arrayexpress
TranscriptomicsmRNA degradation in Mycobacterium tuberculosis under aerobic conditions
Transcription was arrested using 50 ug/ul of rifampin leaving RNA degradation as the sole vector responsible for mRNA abundance. mRNA half-lives were calculated from the decay of signal intensity from T0. Four replicates were sampled after 0, 5 10, 15, 20, and 30 minutes of mRNA decay for a total of...
ORGANISM(S): Mycobacterium tuberculosis H37Rv 
2012-03-08 | E-GEOD-36341 | biostudies-arrayexpress
TranscriptomicsmRNA degradation in Mycobacterium smegmatis under aerobic conditions
Transcription was arrested using 50 ug/ul of rifampin leaving RNA degradation as the sole vector responsible for mRNA abundance. mRNA half-lives were calculated from the decay of signal intensity from T0. Three replicates were sampled before transcription arrest, and after 5 and 10 minutes of mRNA d...
ORGANISM(S): Mycobacterium smegmatis str. MC2 155 
2012-03-08 | E-GEOD-36342 | biostudies-arrayexpress
Proteomics,MultiomicsMTB_hypoxia
LC-MS/MS of cultured Mycobacterium tuberculosis in a hypoxia/reaeration timecourse
ORGANISM(S): Mycobacterium Tuberculosis 
2013-12-31 | PAe004063 | PeptideAtlas
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