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TranscriptomicsGene Array Analyzer (GAA): Alternative usage of gene arrays to study alternative splicing events (MoEx array)
The latest version of microarrays released by Affymetrix, the GeneChip Gene 1.0 ST Arrays (gene arrays), are designed in a similar fashion as exon arrays, which enables to identify differentially expressed exons, rather than only the expression level of whole transcripts. Here, we propose an extensi...
ORGANISM(S): Mus musculus 
2011-11-28 | E-GEOD-32998 | biostudies-arrayexpress
TranscriptomicsGene Array Analyzer (GAA): Alternative usage of gene arrays to study alternative splicing events (MoGene array)
The latest version of microarrays released by Affymetrix, the GeneChip Gene 1.0 ST Arrays (gene arrays), are designed in a similar fashion as exon arrays, which enables to identify differentially expressed exons, rather than only the expression level of whole transcripts. Here, we propose an extensi...
ORGANISM(S): Mus musculus 
2011-11-28 | E-GEOD-30429 | biostudies-arrayexpress
TranscriptomicsGene Array Analyzer (GAA): Alternative usage of gene arrays to study alternative splicing events
This SuperSeries is composed of the following subset Series: GSE30429: Gene Array Analyzer (GAA): Alternative usage of gene arrays to study alternative splicing events (MoGene array) GSE32998: Gene Array Analyzer (GAA): Alternative usage of gene arrays to study alternative splicing events (MoEx arra...
ORGANISM(S): Mus musculus 
2011-11-28 | E-GEOD-33183 | biostudies-arrayexpress
TranscriptomicsWT vs KO comX comparison
Transcriptional profiling of S. thermophilus LMD-9 wild-type compared to the isogenic mutant strain CB003 (deletion of comX, STER_0189) for the identification of the ComX regulon. Cells were grown in CDM medium supplemented with lactose 1% (CDML) and sampled at OD600 = 0.4 for mRNA extraction wild-t...
ORGANISM(S): Streptococcus thermophilus 
2012-01-31 | E-GEOD-28372 | biostudies-arrayexpress
TranscriptomicsKO comR vs. KO comX comparison
Transcriptional profiling of mutant Streptococcus thermophilus LMD-9 comR::lox72 (strain LF148) compared to mutant S. thermophilus LMD-9 DcomX (strain CB003) for the identification of the ComR regulon. Cells were grown in CDM medium supplemented with lactose 1% (CDML) and sampled at OD600 = 0.3~0.4 ...
ORGANISM(S): Streptococcus thermophilus 
2014-02-15 | E-GEOD-35849 | biostudies-arrayexpress
TranscriptomicsWT vs KO mecA comparison
Transcriptional profiling of S. thermophilus LMD-9 wild-type compared to the isogenic mutant strain CB052 (deletion of mecA, STER_0216) for the identification of the MecA regulon. Cells were grown in THB medium supplemented with glucose 1% (THBG) and sampled at OD600 = 0.4 for mRNA extraction wild-t...
ORGANISM(S): Streptococcus thermophilus 
2012-01-31 | E-GEOD-28371 | biostudies-arrayexpress
TranscriptomicsResponse of L. lactis faced to S. cerevisiae
The response of L. lactis to the presence of S. cerevisiae was analyzed during the exponential growth phase in fermentors in defined growth conditions. Although no growth kinetic difference was observed between the pure and mixed culture of L. lactis, the mRNA level of genes was significantly modifi...
ORGANISM(S): Lactococcus lactis 
2010-05-18 | E-GEOD-9436 | biostudies-arrayexpress
TranscriptomicsWT vs KO hdiR comparison
Transcriptional profiling of S. thermophilus LMD-9 wild-type compared to the isogenic mutant strain CB0082 (deletion of hdiR, STER_0918) for the identification of the HdiR regulon. Cells were grown in CDM medium supplemented with lactose 1% (CDML) and sampled at OD600 = 0.4 for mRNA extraction wild-...
ORGANISM(S): Streptococcus thermophilus 
2013-01-31 | E-GEOD-35517 | biostudies-arrayexpress
TranscriptomicsWT vs WTmitomycinC comparison
Transcriptional profiling of S. thermophilus LMD-9 wild-type in the presence of mitomycin C. Cells were grown in CDM medium supplemented with lactose 1% (CDML), without or with mitomycin C 0.08 microg/ml, and sampled at OD600 = 0.4 for mRNA extraction. wild-type vs wild-type + mitomycin C, 2 WT bio...
ORGANISM(S): Streptococcus thermophilus 
2013-01-31 | E-GEOD-35518 | biostudies-arrayexpress
UnknownInteractive effects of ambient fine particulate matter and ozone on daily mortality in 372 cities: two stage time series analysis.
Not available
S-EPMC10548261 | biostudies-literature
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