Brazil C C - OmicsDI

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Unknown (19254)
Proteomics (485)
Genomics (122)
Transcriptomics (85)
Metabolomics (27)
Models (3)
Clinical (2)
Other (2)

Organisms

Homo sapiens (229)
Mus musculus (41)
Rattus norvegicus (14)
Zea mays (12)
Saccharomyces cerevisiae (10)
Trypanosoma cruzi (7)
Eucalyptus grandis (6)
Bos taurus (6)
Bos indicus (4)
Rickettsia rickettsii (4)
Saccharum officinarum (4)
Eucalyptus grandis x Eucalyptus urophylla (3)
Vibrio cholerae (3)
Mus sp. (2)
Xylella fastidiosa (2)
Schistosoma mansoni (2)
Glycine max (2)
Mayaro virus (1)
Aedes albopictus (1)
Saccharum hybrid cultivar (mixed) (1)
Corynebacterium pseudotuberculosis (1)
Bacillus thuringiensis Bt407 (1)
Bacillus thuringiensis (1)
Spodoptera frugiperda (1)
Prunus persica (1)
Apis mellifera (1)
Mycobacterium tuberculosis (1)
Triticum aestivum (1)
Canis lupus familiaris (1)
Oreochromis niloticus (1)

Organisms

Homo sapiens (6)
Saccharum hybrid cultivar SP80-3280 (3)
Pitcairnia albiflos (3)
Streptococcus dysgalactiae subsp. dysgalactiae (3)
Rickettsia rickettsii (2)
Corynebacterium rouxii (2)
Trypanosoma cruzi (2)
Glycine max (2)
Mus musculus (2)
Moniliophthora perniciosa (1)
Crotalus durissus ruruima (1)
Rhomboplites aurorubens (1)
Leptospira borgpetersenii str. 4E (1)
Saccharum hybrid cultivar SP70-1143 (1)
Colletotrichum graminicola (1)
Moniliophthora perniciosa FA553 (1)
Copaifera langsdorffii (1)
Chrysodeixis includens (1)
Curtobacterium flaccumfaciens pv. flaccumfaciens (1)
Turdus rufiventris (1)
Xanthomonas citri pv. eucalyptorum (1)
Cryptococcus deuterogattii CBS 7750 (1)
Sporisorium scitamineum (1)
Colossoma macropomum (1)
Calidris pusilla (1)
Anopheles darlingi (1)
Vriesea longistaminea (1)
Campylobacter sp. (1)
Pitcairnia staminea (1)
Megathyrsus maximus (1)

Repository

pride (477)
ENA (104)
biostudies-arrayexpress (80)
MetaboLights (24)
EGA (14)
geo (11)
MassIVE (4)
BioModels (3)
GNPS (3)
jPOST (3)
EVA (1)

Tissue

Cell culture (81)
Plant cell (38)
Saliva (28)
Blood plasma (23)
Brain (23)
Venom (23)
Leaf (18)
Root (13)
Blood (12)
Epithelial cell (9)
Cell suspension culture (8)
Blood serum (7)
Lung (6)
Skin (6)
Stem cell (6)
Fibroblast (5)
Fungal cell (5)
Melanocyte (5)
Blood cell (4)
Monocyte (4)
Permanent cell line cell (4)
Adrenal gland (3)
Bone marrow (3)
Breast (3)
Cerebrospinal fluid (3)
Cotyledon (3)
Endosperm (3)
Heart (3)
Kidney (3)
Lymph node (3)

Disease

Breast cancer (12)
Disease free (11)
Schizophrenia (11)
COVID-19 (9)
Chagas disease (7)
Paracoccidioidomycosis (7)
Plasmodium falciparum malaria (7)
Zika virus congenital syndrome (7)
Chronic myeloid leukemia (4)
Glioblastoma (4)
Leishmaniasis (4)
Melanoma (4)
Oral squamous cell carcinoma (3)
Severe acute respiratory syndrome (3)
Sjogren's Syndrome (3)
Chikungunya (2)
Cystic echinococcosis (2)
Head and neck cancer (2)
Histoplasmosis (2)
Lung small cell carcinoma (2)
Obesity (2)
Oral cavity cancer (2)
Pre diabetic (1)
N/a (1)
None (1)
Collagen induced arthritis (1)
Type 1 diabetes mellitus (DM-1) (1)
Normal (1)
Colorectal Neoplasms (1)
Doenças da Pele e Tecido Conjuntivo (1)

Technology Type

Mass Spectrometry (477)
Shotgun proteomics (296)
Bottom-up proteomics (97)
HDMSE (60)
Data-dependent acquisition (41)
Mass spectrometry (21)
Data-independent acquisition (21)
Gel-based experiment (20)
MSE (19)
Top-down proteomics (19)
Affinity purification coupled with mass spectrometry proteomics (12)
Chemical cross-linking coupled with mass spectrometry proteomics (6)
All-ion fragmentation (3)
SRM/MRM (3)
Illumina (1)
Mass spectrometry assay (1)
NMR spectroscopy (1)
NMR spectroscopy assay (1)
Immunopeptidomics (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (10)
Liquid Chromatography MS - negative - reverse phase (9)
Illumina HiSeq 2500 (6)
Illumina MiSeq (3)
MicrOTOF II (2)
Xevo G2-S QTof (2)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (2)
Liquid Chromatography MS - negative - hilic (2)
Liquid Chromatography MS - positive - hilic (2)
Cyclone (1)
AB SOLiD 3 Plus System (1)
NextSeq 550 (1)
Illumina NovaSeq 6000 (1)
Illumina HiSeq 2000 (1)
NextSeq 500 (1)
MicrOTOF-Q (1)
6545 Q-TOF LC/MS (1)
Q Exactive Plus (1)
6540 Q-TOF LC/MS (Agilent) (1)
6550 Q-TOF LC-MS Agilent (1)
Bruker (1)
Direct infusion MS - negative (1)
Direct infusion MS - positive (1)
Exactive (Thermo Scientific) (1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography Tandem MS (LC-MS/MS) (1)
Nuclear Magnetic Resonance (NMR) - (1)
Q Exactive (1)
SYNAPT HDMS (Waters) (1)

Publication Date

2022 (78)
2026 (75)
2025 (67)
2023 (59)
2024 (56)
2021 (51)
2019 (45)
2020 (44)
2018 (35)
2016 (16)
2010 (13)
2013 (10)
2017 (10)
2015 (9)
2014 (9)
2012 (8)
2011 (8)
2009 (7)
2007 (5)
2004 (1)

CHEBI ID

CHEBI:28527 (5)
CHEBI:6650 (5)
CHEBI:16828 (4)
CHEBI:17521 (4)
CHEBI:36281 (4)
CHEBI:16235 (3)
CHEBI:16704 (3)
CHEBI:16708 (3)
CHEBI:17154 (3)
CHEBI:17596 (3)
CHEBI:17620 (3)
CHEBI:18388 (3)
CHEBI:23053 (3)
CHEBI:28230 (3)
CHEBI:28733 (3)
CHEBI:30769 (3)
CHEBI:31799 (3)
CHEBI:31985 (3)
CHEBI:42255 (3)
CHEBI:65751 (3)
CHEBI:71225 (3)
CHEBI:74793 (3)
CHEBI:82969 (3)
CHEBI:136555 (2)
CHEBI:140092 (2)
CHEBI:141118 (2)
CHEBI:141126 (2)
CHEBI:141136 (2)
CHEBI:15401 (2)
CHEBI:15843 (2)

Metabolite Name

Caffeic acid (3)
L-Glutamic acid (3)
L-Tryptophan (3)
Malic acid (3)
N1-Acetylspermidine (3)
1-Methyladenosine (2)
5'-Methylthioadenosine (2)
5-HETE (2)
Apigenin (2)
Betaine (2)
Choline (2)
Citric acid (2)
Dihydrokaempferol (2)
Erucic acid (2)
Glycylprolylarginine (2)
Guanine (2)
Ile-Leu (2)
Indoline (2)
Inosine (2)
L-Histidine (2)
L-Kynurenine (2)
L-Lysine (2)
L-Threonine (2)
L-Tyrosine (2)
Niacinamide (2)
Oleamide (2)
Oleoylcarnitine (2)
Rosmarinic acid (2)
Sphinganine (2)
Tryptophan (2)

First Public Date

2025 (18)
2024 (14)
2014 (12)
2020 (11)
2026 (10)
2019 (7)
2018 (6)
2017 (6)
2013 (6)
2023 (5)
2022 (5)
2021 (2)
2015 (2)

Modelling Approach

Ordinary differential equation model (3)

Study status

Active, not recruiting (1)
Not yet recruiting (1)

Lab affiliation

Federal University of Rio de Janeiro (8)
Laboratório de Biotecnologia, Centro de Biociências e Biotecnologia (CBB), Universidade Estadual do Norte Fluminense Darcy Ribeiro (UENF), Av. Alberto Lamego, Campos dos Goytacazes, RJ, Brazil. Unidade de Biologia Integrativa, Setor de Genômica e Proteômica, UENF, Campos dos Goytacazes, RJ, Brazil. (8)
Lab of Neuroproteomics, Department of Biochemistry and Tissue Biology, Institute of Biology, University of Campinas (UNICAMP), Campinas, SP, Brazil (5)
Biochemistry and molecular biology department, Universidade Federal de Goias, Brazil (4)
Instituto Carlos Chagas, Fundação Oswaldo Cruz (Fiocruz), Curitiba, Brazil. (4)
Department of Parasitology, Institute of Biomedical Sciences, University of São Paulo, São Paulo, Brazil (3)
Federal University of Goias (3)
Federal University of Uberlandia (3)
GlycoProteomics Laboratory, Department of Parasitology, Institute of Biomedical Sciences, University of Sao Paulo, Avenida Lineu Prestes 1374, CEP 05508-000, Sao Paulo, Brazil (3)
Laboratory of Protein Chemistry and Biochemistry, Institute of Biology, Department of Cell Biology, University of Brasília, Brasília, Brazil (3)
1. Laboratório de Neurofisiologia, Departamento de Ciências Fisiológicas, Instituto de Biologia Roberto Alcantara Gomes, Universidade do Estado do Rio de Janeiro (UERJ), Av. Prof. Manuel de Abreu 444, 5 andar – Vila Isabel, Rio de Janeiro, RJ, 20550-170, Brazil. (2)
Butantan Institute (2)
CNPEM (2)
Center for Biotechnology and Department of Botany, Federal University of Rio Grande do Sul, Porto Alegre, P.O. Box 15005, 91501-970, Brazil (2)
Center for Technological Development in Health, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil (2)
Departamento de Bioquimica, Escola Paulista de Medicina, Universidade Federal de Sao Paulo, SP, Brazil (2)
Departamento de Bioquimica, Escola Paulista de Medicina, UniversidadeFederal de Sao Paulo, SP, Brazil (2)
Departamento de Fisiologia e Biofisica, Universidade Federal de Minas Gerais (2)
Department of Parasitology, Institute of Biomedical Sciences, University of Sao Paulo (2)
Dept. of Biochemistry, Laboratory of Neuroproteomic, Biology Institute, Brazil (2)
Div. Clinical Protein Science and Imaging, Dept. of Clinical Sciences and Dept. of Biomedical Engineering, Lund University, Sweden (2)
ESALQ (2)
ESALQ-USP (2)
Escola Superior de Agricultura Luiz de Queiroz da Universidade de São Paulo (2)
Federal University of São Paulo - Institute of Science and Technology - Applied Immunology Lab (2)
Fleury Group (2)
Functional Genomics Laboratory, Carlos Chagas Institute, Fiocruz, Curitiba, Parana, Brazil (2)
Genetics Department, Federal University of Parana, Curitiba, Brazil (2)
Instituto Carlos Chagas, Fundação Oswaldo Cruz (Fiocruz), Curitiba, Brazil (2)
Lab of Neuroproteomics, Department of Biochemistry and Tissue Biology, Institute of Biology, University of Campinas (UNICAMP), Campinas, Brazil. (2)