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RNA-seq was performed to determine the transcriptional response of human monocyte-derived macrophages to Salmonella infection and whether Chlorpromazine affected this response. These data were used to determine whether enhanced killing capacity of Chlorpromazine treated cells was due to transcriptio...
ORGANISM(S): Homo sapiens 
We use tolDCs from syngeneic (C57BL6) and allogeneic (BALB/c) mice to show potent renoprotective abilities in a ischemia reperfusion AKI model. Dendritic cells were derived from mice bone marrow and cultured for 7 days with GM-CSF and IL-4. Tolerogenic DCs were cultured in the same DC media but with...
ORGANISM(S): Mus musculus 
Total RNA was isolated from WT and the mutant and the ribosomal RNA was removed using Ambion Kit. Construction of cDNA library, addition of adapters and sequence read were performed. 2 samples were used, WT Salmonella and its yqhC mutant
ORGANISM(S): Salmonella enterica subsp. enterica serovar Typhimurium 
Maintenance of the correct level and organization of nucleosomes is crucial for genome function. Here we uncover a role for a conserved bromodomain AAA-ATPase, Abo1, in maintenance of nucleosome architecture in fission yeast. Cells lacking abo1+ experience both a reduction and mis-positioning of nuc...
ORGANISM(S): Schizosaccharomyces pombe 
Ciona develops according to a stereotyped or invariant lineage. This allowed us to collect precisely defined replicates of all eight blastomeres of the right half of the embryo at the 16-cell stage of Ciona. We manually dissected each embryo, collecting and identifying each cell before library prepa...
ORGANISM(S): Ciona robusta 
Dicer is a central enzymatic player in RNA interference (RNAi) pathways that acts to regulate gene expression in nearly all eukaryotes. Although the cytoplasmic function of Dicer is well documented in mammals, there is little known about any possible nuclear function. Here we show that Dicer is pre...
ORGANISM(S): Homo sapiens 
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