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TranscriptomicsTranscription profiling of roots and leaves of tomato plants colonized by the arbuscular mycorrhizal fungus Glomus mosseae
Transcriptional changes triggered in roots and shoots of tomato (Solanum lycopersicum) as a result of the colonization by the AM fungus Glomus mosseae.
ORGANISM(S): Solanum lycopersicum 
2009-08-01 | E-MTAB-117 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of hearts from young (2-4 month) and moderately aged (16-18 month) C57/Bl6 male mice subjected to i) 20 min global ischaemia, 60 min reperfusion or ii) 80 min aerobic perfusion/normoxia
Hearts from young (2-4 month) and moderately aged (16-18 month) C57/Bl6 male mice were subjected to i) 20 min global ischaemia, 60 min reperfusion or ii) 80 min aerobic perfusion/normoxia.
ORGANISM(S): Mus musculus 
2005-12-31 | E-MEXP-496 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of adult drosophila renal tubule vs whole fly
The experiment was designed to identify genes abundant or enriched in adult Drosophila melanogaster Malpighian (renal) tubule as compared to the whole fly.
ORGANISM(S): Drosophila melanogaster 
2004-06-23 | E-MEXP-127 | biostudies-arrayexpress
TranscriptomicsTranscriptome sequencing and comparative transcriptome analysis of the scleroglucan producer Sclerotium rolfsii
Two S. rolfsii transcriptomes obtained from scleroglucan-producing and scleroglucan-nonproducing conditions were pooled and sequenced using the 454 pyrosequencing technique yielding ~350,000 reads. These could be assembled into 21,937 contigs and 171,833 singletons, for which 6,951 had significant m...
ORGANISM(S): Athelia rolfsii 
2010-05-15 | E-GEOD-21040 | biostudies-arrayexpress
TranscriptomicsComparative genomic hybridization of wild type yeast isolated from clinical samples and wine fermentations to investigate genetic variability in yeast from different ecological niches
Using microarrays targeting the complete ORFeome of Saccharomyces cerevisiae S288c, this study investigates the genetic variability present in wild type yeast from different ecological niches by comparative genome hybridization on array (aCGH). Genomic DNA of Saccharomyces strains isolated from clin...
ORGANISM(S): Saccharomyces cerevisiae 
2008-10-01 | E-MTAB-29 | biostudies-arrayexpress
TranscriptomicsTranscription profiling by array of yeast isolates at different time points during fermentation
Transcriptome analysis in natural Saccharomyces cerevisiae as function of fermentation stage. Strains used were the reference strain S288C, two (06L3FF02 and 06L6FF20) isolates from the Bairrada wine region, Portugal, three (Lalvin EC-1118, Lalvin ICV D254 and AEB Fermol Rouge) wine yeast obtained c...
ORGANISM(S): Saccharomyces cerevisiae 
2010-06-24 | E-MTAB-112 | biostudies-arrayexpress
TranscriptomicsGene expression in liver, gill, hypothalamus, pituitary, and olfactory rosettes from Atlantic salmon parr and smolt
To identify genes involved in the developmental process of Atlantic salmon smoltification, gene expression was compared between smolt and parr in tissues involved in osmoregulation (gill), metabolism (liver), imprinting (olfactory rosettes) and neuroendocrine control (hypothalamus and pituitary). ...
ORGANISM(S): Salmo salar 
2012-08-20 | E-GEOD-33711 | biostudies-arrayexpress
TranscriptomicsDefining Gene Signatures for Protective Immunity to Tuberculosis in the Rhesus Macaque Model
Gene expression profiles in PPD-stimulated and unstimulated peripheral blood mononuclear cells isolated from rhesus macaques before and after M. tuberculosis challenge were compared in animals able to control TB infection and those that developed TB disease in order to identify potential correlates ...
ORGANISM(S): Macaca mulatta 
2018-12-16 | E-MTAB-7558 | biostudies-arrayexpress
TranscriptomicsEffect of nonylphenol on gene expression in Atlantic salmon liver, gill, hypothalamus, pituitary, and olfactory rosettes
Exposure to environmental contaminants like nonylphenol can disrupt smolt development and may be a contributing factor in salmon population declines. We used GRASP 16K cDNA microarrays to identify genes that are differentially expressed in the liver, gill, hypothalamus, pituitary, and olfactory ros...
ORGANISM(S): Salmo salar 
2012-06-03 | E-GEOD-33715 | biostudies-arrayexpress
TranscriptomicsSampaio_UMinho_Candida albicans Mutant vs Wt_YPD
Candida albicans strain with RLM1 deletion was compared to wild type strain. Growth in YPD medium. Two comparisons were performed on microarray in dye-swap hybridizations.
ORGANISM(S): Candida albicans 
2012-01-01 | E-MEXP-3247 | biostudies-arrayexpress
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