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TranscriptomicsA blueprint for C4 photosynthesis in the rice paddy: insights from the noxious weed Echinochloa glabrescens
The C4 pathway is a highly complex trait that increases photosynthetic efficiency in over sixty plant lineages. Although the majority of C4 plants occupy disturbed, arid and nutrient-poor habitats, some grow in high-nutrient, waterlogged conditions. One such example is Echinochloa glabrescens, which...
ORGANISM(S): Echinochloa glabrescens 
2015-08-11 | E-MTAB-4422 | biostudies-arrayexpress
UnknownUpdating the steady-state model of C4 photosynthesis.
Not available
S-EPMC8411607 | biostudies-literature
TranscriptomicsExploring the mechanism of C4 photosynthetic differentiation through a unified comparative analysis of maize and rice leaf transcriptomes
Maize and rice are the two most economically important grass crops and utilize distinct forms of photosynthesis to fix carbon: C4 and C3 respectively. Relative to C3 photosynthesis, C4 photosynthesis reduces photorespiration and affords higher water and nitrogen use efficiencies under hot arid condi...
ORGANISM(S): Zea mays 
2014-10-12 | E-GEOD-54274 | biostudies-arrayexpress
GenomicsPhotosynthesis in C3-C4 intermediate Moricandia species
Photosynthesis in C3-C4 intermediate Moricandia species
PRJNA344463 | ENA
TranscriptomicsRNAseq profiling of C4 grass Sorghum bicolor bundle sheath and mesophyll cells
Triplicate replicates of bundle sheath and mesophyll cell RNAseq from the C4 grass Sorghum bicolor.
ORGANISM(S): Sorghum bicolor 
2016-06-06 | E-MTAB-4021 | biostudies-arrayexpress
ProteomicsSubcellular organization of single-cell C4 photosynthesis in Bienertia sinuspersici determined by large scale proteomics
Bienertia sinuspersici performs C4 photosynthesis without Kranz anatomy through subcellular compartmentalization of carbon fixation within individual cells. In this species, central compartment chloroplasts (C) and peripheral chloroplasts (P) collaborate with cytosolic and mitochondrial components i...
ORGANISM(S): Bienertia sinuspersici Arabidopsis thaliana (Mouse-ear cress) 
2015-03-17 | PXD001910 | Pride
Shotgun proteomics Bienertia sinuspersici Subcellular organization Single-cell c4 photosynthesis 
TranscriptomicsGenome-wide transcript analysis of early maize leaf development reveals gene cohorts associated with the differentiation of C4 Kranz anatomy
Photosynthesis underpins the viability of most ecosystems, with C4 plants that exhibit ‘Kranz’ anatomy being the most efficient primary producers. Kranz anatomy is characterized by closely spaced veins that are encircled by two morphologically distinct photosynthetic cell types. Although Kranz a...
ORGANISM(S): Zea mays 
2013-07-29 | E-MTAB-4134 | biostudies-arrayexpress
TranscriptomicsPhotosynthesis in C3-C4 intermediate Moricandia species
Analysis of the metabolism in mature leaves of Moricandia species with C3 and C3-C4 intermediate photosynthesis
ORGANISM(S): Moricandia suffruticosa Moricandia arvensis Moricandia moricandioides 
2016-10-01 | GSE87343 | GEO
TranscriptomicsComparative histone modification profiling revealed developmentally regulated acetylation on upstream promoters of C4 genes and potential C4 regulators
We analysed genome-wide histone H3 lysine 4 trimethylation and histone H3 lysine 9 acetylation, two modifications typically associated with active genes, in meristematic cells at the base and expanding cells in the maturing zone of the maize (Zea mays) leaf. These data were compared to transcript le...
ORGANISM(S): Zea mays 
2015-09-03 | E-GEOD-67551 | biostudies-arrayexpress
GenomicsTranscriptomics of C4 photosynthesis in rice paddy
A blueprint for C4 photosynthesis in the rice paddy: insights from the noxious weed Echinochloa glabrescens
PRJEB9593 | ENA
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