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TranscriptomicsA blueprint for C4 photosynthesis in the rice paddy: insights from the noxious weed Echinochloa glabrescens
The C4 pathway is a highly complex trait that increases photosynthetic efficiency in over sixty plant lineages. Although the majority of C4 plants occupy disturbed, arid and nutrient-poor habitats, some grow in high-nutrient, waterlogged conditions. One such example is Echinochloa glabrescens, which...
ORGANISM(S): Echinochloa glabrescens 
2015-08-11 | E-MTAB-4422 | biostudies-arrayexpress
GenomicsPhotosynthesis in C3-C4 intermediate Moricandia species
Photosynthesis in C3-C4 intermediate Moricandia species
PRJNA344463 | ENA
TranscriptomicsPhotosynthesis in C3-C4 intermediate Moricandia species
Analysis of the metabolism in mature leaves of Moricandia species with C3 and C3-C4 intermediate photosynthesis
ORGANISM(S): Moricandia suffruticosa Moricandia arvensis Moricandia moricandioides 
2016-10-01 | GSE87343 | GEO
ProteomicsSubcellular organization of single-cell C4 photosynthesis in Bienertia sinuspersici determined by large scale proteomics
Bienertia sinuspersici performs C4 photosynthesis without Kranz anatomy through subcellular compartmentalization of carbon fixation within individual cells. In this species, central compartment chloroplasts (C) and peripheral chloroplasts (P) collaborate with cytosolic and mitochondrial components i...
ORGANISM(S): Bienertia sinuspersici Arabidopsis thaliana (Mouse-ear cress) 
2015-03-17 | PXD001910 | Pride
Shotgun proteomics Bienertia sinuspersici Subcellular organization Single-cell c4 photosynthesis 
GenomicsTranscriptomics of C4 photosynthesis in rice paddy
A blueprint for C4 photosynthesis in the rice paddy: insights from the noxious weed Echinochloa glabrescens
PRJEB9593 | ENA
GenomicsAdaptation of the circadian clock during the evolution of C4 photosynthesis
Adaptation of the circadian clock during the evolution of C4 photosynthesis
PRJNA301449 | ENA
TranscriptomicsAdaptation of the circadian clock during the evolution of C4 photosynthesis
circadian clock during the evolution of C4 photosynthesis
ORGANISM(S): Flaveria robusta Flaveria bidentis 
2023-01-01 | GSE74768 | GEO
TranscriptomicsPROTON GRADIENT REGULATION 5 enables efficient C4 photosynthesis under fluctuating light
PROTON GRADIENT REGULATION 5 (PGR5) plays a critical role in generating proton motive force across thylakoid membranes and supporting photoprotection under fluctuating light in C3 plants. It is proposed that this function is achieved by regulating cyclic electron flow around Photosystem I. During th...
ORGANISM(S): Setaria viridis 
2025-10-21 | GSE287975 | GEO
GenomicsPROTON GRADIENT REGULATION 5 enables efficient C4 photosynthesis under fluctuating light
PROTON GRADIENT REGULATION 5 enables efficient C4 photosynthesis under fluctuating light
PRJNA1215394 | ENA
TranscriptomicsSingle nuclei sequencing reveals C4 photosynthesis is based on rewiring of ancestral cell identity networks
In multicellular systems changes to the patterning of gene expression drive modifications in cell function and trait evolution. One striking example is found in more than sixty plant lineages where compartmentation of photosynthesis between cell types allowed evolution of the efficient C4 pathway fr...
ORGANISM(S): Oryza sativa Sorghum bicolor 
2023-12-05 | GSE248919 | GEO
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