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Transcriptomicsribo-depleted RNA-Seq of human HepG2 cells exposed to Benzo[a]pyrene for 6, 12, 18, 24, 36 and 48 hours
HepG2 cells (human liver hepatocarcinoma) were exposed for 6 different time points (6,12,18,24,36 and 48h) to Benzo[a]pyrene (BaP) in duplicate. Total RNAs were ribo-depleted and sequenced on an Illumina Hiseq2000 in pair-end 100 bp reads. One of the duplicates for BaP-treated sample at the 24 hour ...
ORGANISM(S): Homo sapiens 
2015-08-02 | E-MTAB-3292 | biostudies-arrayexpress
TranscriptomicsHepG2 cells exposed to Benzo[a]pyrene for 6,12,18,24,36 and 48h.
HepG2 cells (human liver hepatocarcinoma) were exposed for 6 different time points (6,12,18,24,36 and 48h) to Benzo[a]pyrene (BaP) in duplicate.
ORGANISM(S): Homo sapiens 
2015-01-25 | E-MTAB-3251 | biostudies-arrayexpress
TranscriptomicsSingle cell RNA Sequencing (scRNA-Seq) on human embryonic stem cell-derived thyroid organoids exposed for 3 days to sex hormones + 1 day to benzo[a]pyrene (BaP) or PCB153
Human embryonic stem cell-derived thyroid follicles were exposed for 3 days to a mixture of the sex hormones beta-estradiol (E2), 5-alpha-dihydrotestosterone (DHT) and progesterone (PG) that resemble the serum levels of human male and female (post-ovulation) of reproductive age. Afterwards, they wer...
ORGANISM(S): Homo sapiens 
2024-08-29 | E-MTAB-13502 | biostudies-arrayexpress
UnknownDMSO induces drastic changes in human cellular processes and epigenetic landscape in vitro.
Not available
S-EPMC6420634 | biostudies-literature
UnknownIdentifying novel transcript biomarkers for hepatocellular carcinoma (HCC) using RNA-Seq datasets and machine learning.
Not available
S-EPMC8394105 | biostudies-literature
UnknownPredicting missing proteomics values using machine learning: Filling the gap using transcriptomics and other biological features.
Not available
S-EPMC9077535 | biostudies-literature
UnknownHigh-throughput data integration of RNA-miRNA-circRNA reveals novel insights into mechanisms of benzo[a]pyrene-induced carcinogenicity.
Not available
S-EPMC4357716 | biostudies-literature
UnknownAssessing the effect of the CLPG mutation on the microRNA catalog of skeletal muscle using high-throughput sequencing.
Not available
S-EPMC2989991 | biostudies-literature
UnknownAnalysis of cell-specific transcriptional responses in human colon tissue using CIBERSORTx.
Not available
S-EPMC10600214 | biostudies-literature
UnknownFuSe: a tool to move RNA-Seq analyses from chromosomal/gene loci to functional grouping of mRNA transcripts.
Not available
S-EPMC8058771 | biostudies-literature
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