Campylobacter fetus subsp. fetus

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Transcriptomics (109)
Genomics (89)
Unknown (53)
Proteomics (17)
Metabolomics (3)

Organisms

Campylobacter jejuni (64)
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 (28)
Actinobacillus pleuropneumoniae (7)
Gallus gallus (4)
Mycobacterium tuberculosis SP7 (4)
Mycobacterium tuberculosis SP10 (4)
Mycobacterium tuberculosis SP13 (4)
Mycobacterium tuberculosis SP22 (4)
Chlamydomonas reinhardtii (4)
Enterococcus mundtii CRL35 (4)
Oncorhynchus tshawytscha (4)
Pseudomonas canadensis (4)
Human alphaherpesvirus 1 strain 17 (4)
Mycobacterium tuberculosis SP1 (4)
Marchantia polymorpha subsp. ruderalis (4)
Methylocystis sp. (4)
Exiguobacterium sp. SH31 (4)
Amaranthus tricolor (4)
Clavibacter nebraskensis NCPPB 2581 (4)
Porites pukoensis (4)
Porphyromonas gingivalis W83 (4)
Campylobacter jejuni subsp. jejuni 81-176 (3)
Campylobacter lari (1)
Geobacter metallireducens (1)
Campylobacter jejuni subsp. jejuni 81116 (1)
Campylobacter (1)
Campylobacter coli (1)
Salmonella enterica subsp. enterica serovar Enteritidis (1)
Mus musculus (1)
Homo sapiens (1)

Organisms

Campylobacter fetus subsp. testudinum (32)
Campylobacter fetus subsp. fetus (11)
Campylobacter fetus subsp. venerealis (10)
Campylobacter fetus subsp. venerealis NCTC 10354 (2)
Campylobacter fetus subsp. venerealis LMG 6570 = CCUG 33900 (2)
Campylobacter fetus subsp. venerealis str. 84-112 (2)
Campylobacter fetus subsp. venerealis cfvi03/596 (1)
Campylobacter fetus subsp. fetus cff110800-21-2 (1)
Campylobacter fetus subsp. venerealis cfvi97/532 (1)
Campylobacter fetus subsp. venerealis cfvi92/203 (1)
Campylobacter fetus subsp. venerealis cfvi01/165 (1)
Campylobacter fetus subsp. venerealis 97/608 (1)
Campylobacter fetus subsp. fetus BT 10/98 (1)
Campylobacter fetus subsp. fetus 04/554 (1)
Campylobacter fetus subsp. testudinum 03-427 (1)
Campylobacter fetus subsp. venerealis str. Azul-94 (1)
Campylobacter fetus subsp. venerealis bv. intermedius str. 99541 (1)
Campylobacter fetus subsp. venerealis CCUG 33872 (1)
Campylobacter fetus subsp. venerealis cfvi02/298 (1)
Campylobacter fetus subsp. venerealis cfvi03/293 (1)
Campylobacter fetus subsp. venerealis cfvi9825 (1)
Campylobacter fetus subsp. testudinum Sp3 (1)
Campylobacter fetus subsp. venerealis cfvB10 (1)
Campylobacter fetus subsp. fetus 82-40 (1)
Campylobacter fetus subsp. venerealis bv. intermedius str. 642-21 (1)
Campylobacter fetus subsp. venerealis bv. venerealis str. B6 (1)

Repository

biostudies-arrayexpress (121)
ENA (86)
MassIVE (4)
pride (4)
MetaboLights (3)

Technology Type

Mass Spectrometry (4)
Shotgun proteomics (4)
Mass spectrometry (2)
Mass spectrometry assay (1)

Instrument Platform

Illumina HiSeq 3000 (4)
Variable Atmosphere Incubator (3)
Ultrospec 3000 (2)
NextSeq 500 (2)
LTQ Orbitrap Velos (2)
GeneQuant DNA/RNA caluculator (1)
Genetix aQuire (1)
BD GasPak 150 Jar (1)
G2505A DNA microarray scanner [Agilent] (1)
Bioanalyser (1)
Illumina MiSeq (1)
NextSeq 550 (1)
Illumina NovaSeq 6000 (1)
Synapt XS (1)
ACQUITY UPLC I-Class (1)
Q Exactive (1)
Liquid Chromatography MS - - hilic (1)
SYNAPT HDMS (Waters) (1)
Liquid Chromatography MS - positive - reverse-phase (1)
Liquid Chromatography MS - negative - reverse-phase (1)

Publication Date

2013 (25)
2010 (18)
2012 (15)
2005 (11)
2011 (9)
2014 (7)
2007 (6)
2015 (5)
2008 (5)
2020 (5)
2024 (4)
2022 (4)
2009 (4)
2016 (3)
2023 (2)
2018 (2)
2017 (2)
2006 (2)
2021 (1)
2026 (1)
2025 (1)

CHEBI ID

CHEBI:141533 (1)
CHEBI:141535 (1)
CHEBI:141548 (1)
CHEBI:141546 (1)
CHEBI:141545 (1)
CHEBI:141544 (1)
CHEBI:141543 (1)
CHEBI:141542 (1)
CHEBI:141541 (1)
CHEBI:141549 (1)
CHEBI:141531 (1)
CHEBI:141528 (1)
CHEBI:141526 (1)
CHEBI:141532 (1)
CHEBI:141536 (1)
CHEBI:141530 (1)
CHEBI:49432 (1)
CHEBI:26533 (1)
CHEBI:141539 (1)
CHEBI:141540 (1)
CHEBI:141534 (1)
CHEBI:141537 (1)
CHEBI:89393 (1)
CHEBI:141529 (1)
CHEBI:29988 (1)
CHEBI:73092 (1)
CHEBI:17079 (1)
CHEBI:17882 (1)
CHEBI:81042 (1)
CHEBI:6414 (1)

Metabolite Name

GPGro(18:1(9E)/0:0)[U] (1)
GPGro(14:0/0:0)[U] (1)
(2S,3S,5R,6R)-3-{[2-({N-[(2R)-2,4-Dihydroxy-3,3-dimethylbutanoyl]-beta-alanyl}amino)ethyl]sulfanyl}-6-(1-hydroxyethyl)-7-oxo-1-azabicyclo[3.2.0]heptane-2-carboxylic acid (1)
2,6,9-Trihydroxy-11-(1-hydroxy-2-propanyl)-1,5,10-trimethyl-8-oxatetracyclo[7.4.1.1~7,10~.0~2,7~]pentadec-11-ene-13,15-dione (1)
7-[(6-Hydroxy-2,5,5,8a-tetramethyl-4-oxo-1,4,4a,5,6,7,8,8a-octahydro-1-naphthalenyl)methoxy]-2H-chromen-2-one (1)
2,2'-[3-(2-Methoxyphenyl)-1,2-propanediyl]bis(1H-benzimidazole) (1)
8,8-Dimethyl-2-oxo-7,8-dihydro-2H,6H-pyrano[3,2-g]chromen-7-yl (2Z)-2-methyl-2-butenoate (1)
2,4,6-Trihydroxy-5-[1-(3-hydroxy-1,1,5-trimethyldecahydrocyclopropa[e]inden-5-yl)-3-methylbutyl]isophthalaldehyde (1)
TG(20:0/20:0/20:4(5Z,8Z,11Z,14Z)) (1)
PS(DiMe(11,5)/MonoMe(13,5)) (1)
PE(DiMe(11,5)/MonoMe(13,5)) (1)
TG(16:0/20:3(5Z,8Z,11Z)/O-18:0) (1)
Beta-Alanyl-CoA (1)
PE(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (1)
PS(15:0/24:0) (1)
PE(DiMe(11,3)/DiMe(11,3)) (1)
PG(16:1(9Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) (1)
PE(18:4(6Z,9Z,12Z,15Z)/20:5(5Z,8Z,11Z,14Z,17Z)) (1)
PC(O-16:0/18:0) (1)
N-Glycoloylganglioside GM2 (1)
Malvidin 3-(6-malonylglucoside) 5-glucoside (1)
Hexacarboxylporphyrin I (1)
PC(14:1(9Z)/18:4(6Z,9Z,12Z,15Z)) (1)
Aquifoliunine EIII (1)
DG(24:1n9/0:0/18:2n6) (1)
Diguanosine diphosphate (1)
Theaflavate B (1)
NADHX (1)
PE(14:1(9Z)/18:4(6Z,9Z,12Z,15Z)) (1)
Cer(d18:0/25:0) (1)

First Public Date

2015 (28)
2013 (25)
2019 (12)
2020 (11)
2018 (3)
2024 (2)
2021 (2)
2023 (1)
2016 (1)
2014 (1)

Classification

bacteria (79)

Study type

Transcription profiling by array (66)
Comparative genomic hybridization by array (17)
Unknown experiment type (12)
Proteomic profiling by array (9)
RNA-seq of coding RNA (9)
RNA-seq of total RNA (4)
DNA-seq (2)
Methylation profiling by high throughput sequencing (1)
RNA-seq of non coding RNA (1)

Release Date

2013 (26)
2010 (21)
2012 (17)
2005 (12)
2014 (10)
2011 (10)
2024 (9)
2016 (8)
2022 (7)
2007 (7)
2020 (7)
2015 (6)
2009 (5)
2008 (5)
2021 (5)
2018 (4)
2023 (3)
2017 (3)
2006 (3)
2019 (2)
2002 (2)
2004 (1)
2003 (1)

Lab affiliation

Department of Microbiology and Immunology, University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne 3000, Australia (3)
-Department of Microbiology and Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA. -Department of Medical Microbiology and Immunology, University of Alberta, Edmonton, Canada. (1)

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LFQ of Campylobacter fetus subsp. fetus strains

Comparsion of proteomes of Campylobacter fetus subsp. fetus to compare protein level via iBAQ analysis, expression (by LFQ) and coverage between Campylobacter fetus subsp. fetus strain82-40 vs Campylobacter fetus subsp. fetus strain ATCC 27374

ORGANISM(S): Campylobacter fetus subsp. fetus 82-40

2020-05-25 | PXD014538 | Pride