Canis familiaris - OmicsDI

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Organisms

Canis lupus familiaris (853)
Homo sapiens (93)
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dust metagenome (1)
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Organisms

Canis lupus familiaris (820)
Canis lupus (4)
Callithrix jacchus (2)
Canis (2)
Bartonella vinsonii subsp. berkhoffii str. Tweed (1)
Bartonella vinsonii subsp. berkhoffii str. Winnie (1)
Collinsella sp. BA40 (1)
Rickettsia rickettsii (1)
Leptospira santarosai str. ST188 (1)
Escherichia sp. AB366 (1)
Leptospira interrogans str. Kito (1)
Leptospira noguchii str. Hook (1)
Leptospira interrogans serovar Icterohaemorrhagiae str. Kantorowic (1)
Canis latrans (1)
Microsporum canis (1)
Canis familiaris papillomavirus 10 (1)
Severe acute respiratory syndrome coronavirus 2 (1)
Sus scrofa (1)
Pseudomonas aeruginosa (1)
Streptococcus agalactiae (1)
Bos taurus (1)
Homo sapiens (1)

Repository

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Tissue

Blood plasma (19)
Epithelial cell (16)
Blood serum (14)
Kidney (12)
Cell culture (10)
Urine (7)
Brain (6)
Cerebrospinal fluid (5)
Permanent cell line cell (5)
Blood (4)
Adipose tissue (4)
Stem cell (4)
Spleen (4)
Blood cell (4)
Bone (3)
Pancreas (3)
Milk (3)
Skin (3)
Heart (3)
Lung (3)
Saliva (3)
Liver (3)
Blood (3)
Duodenum (2)
Feces (2)
Colon (1)
Rectum (1)
Intestine (1)
Ileum (1)
Muscle (1)

Disease

Disease free (5)
Leishmaniasis (4)
Influenza (4)
Breast cancer (4)
Normal (3)
Babesiosis (3)
Epilepsy (3)
Diabetes (2)
Uterine inflammatory disease (2)
Osteosarcoma (2)
Lymphoma (2)
Cardiovascular system disease (2)
Wounds and Injuries (2)
Oral malignant melanoma (1)
Reference (1)
Muscular dystrophy (1)
Irritable bowel syndrome (1)
Anal gland adenocarcinoma (1)
Diabetic angiopathy (1)
Spleen angiosarcoma (1)
Calcium oxalate nephrolithiasis (1)
Polycystic kidney disease (1)
Connective tissue disease (1)
Idiopathic pulmonary fibrosis (1)
Fibrosarcoma (1)
Pancreatitis (1)
Diabetes mellitus (1)
Nephrolithiasis (1)
Gingivitis (1)
Duchenne muscular dystrophy (1)

Technology Type

Mass Spectrometry (126)
Shotgun proteomics (66)
Bottom-up proteomics (21)
Data-dependent acquisition (17)
SWATH MS (7)
Mass spectrometry (6)
ESI (6)
Gel-based experiment (6)
Mass spectrometry assay (4)
EI (4)
SRM/MRM (4)
Top-down proteomics (4)
Affinity purification coupled with mass spectrometry proteomics (4)
NMR spectroscopy (3)
Data-independent acquisition (2)
NMR spectroscopy assay (1)
Mass spectrometry imaging (1)
DiaPASEF (1)

Instrument Platform

- (25)
NextSeq 500 (10)
Illumina NovaSeq 6000 (9)
Illumina HiSeq 2000 (5)
Illumina HiSeq 4000 (5)
Illumina NovaSeq X (4)
Illumina HiSeq 2500 (4)
Illumina CanineHD (4)
NextSeq 550 (3)
AB 3730xl (3)
Tru-cut biopsy needle (Marquee®, 16 G × 10 cm) (2)
. (2)
GenePix Personal 4100A [Axon Instruments] (2)
Illumina Genome Analyzer II (2)
TruSeq PCR-free Sample Preparation Kit (1)
Microsyringe for intraperitoneal injection (1)
Computational server/cluster, Software: R (v4.3.x), Seurat package (v5.1.0) (1)
Biological safety cabinet, Centrifuge, Cell strainer, Automated cell counter/Hemocytometer (1)
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Illumina Nextera XT (1)
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BD Rhapsody system (1)
Illumina TruSeq (1)
RNeasy minikit (1)
GeneTitan® multi-channel instrument (1)
Qiagen (1)
GenePix 4000A [Axon Instruments] (1)
Illumina Genome Analyzer IIx (1)
TruSeq® Nano (1)

Publication Date

2026 (90)
2013 (84)
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2024 (81)
2023 (74)
2020 (71)
2021 (65)
2022 (62)
2010 (61)
2019 (60)
2014 (57)
2015 (51)
2016 (46)
2018 (40)
2017 (40)
2012 (39)
2011 (23)
2008 (21)
2009 (15)
2004 (7)
2007 (6)
2006 (4)
2005 (2)
2003 (2)

ENSEMBL ID

ENSCAFG00000004948.2 (1)
ENSCAFG00000002929.2 (1)
ENSCAFG00000006020.2 (1)
ENSCAFG00000006475.2 (1)
ENSCAFG00000023592.1 (1)
ENSCAFG00000008218.2 (1)
ENSCAFG00000004140.2 (1)
ENSCAFG00000016611.2 (1)
ENSCAFG00000014660.2 (1)
ENSCAFG00000015298.2 (1)
ENSCAFG00000001570.2 (1)
ENSCAFG00000023724.1 (1)
ENSCAFG00000000578.2 (1)
ENSCAFG00000003954.2 (1)
ENSCAFG00000003154.2 (1)
ENSCAFG00000015113.2 (1)
ENSCAFG00000013811.2 (1)
ENSCAFG00000007938.2 (1)
ENSCAFG00000013104.2 (1)
ENSCAFG00000004999.2 (1)
ENSCAFG00000011021.2 (1)
ENSCAFG00000020383.2 (1)
ENSCAFG00000012776.2 (1)
ENSCAFG00000017307.2 (1)
ENSCAFG00000004011.2 (1)
ENSCAFG00000018706.2 (1)
ENSCAFG00000012743.2 (1)
ENSCAFG00000004818.2 (1)
ENSCAFG00000008554.2 (1)
ENSCAFG00000009261.1 (1)

CHEBI ID

CHEBI:17750 (3)
CHEBI:15354 (3)
CHEBI:30769 (3)
CHEBI:30751 (2)
CHEBI:16997 (2)
CHEBI:17790 (2)
CHEBI:15347 (2)
CHEBI:15428 (2)
CHEBI:17754 (2)
CHEBI:17268 (2)
CHEBI:18123 (2)
CHEBI:16857 (2)
CHEBI:15366 (2)
CHEBI:32816 (2)
CHEBI:16737 (2)
CHEBI:16919 (2)
CHEBI:17191 (2)
CHEBI:190234 (1)
CHEBI:190232 (1)
CHEBI:190231 (1)
CHEBI:190230 (1)
CHEBI:88496 (1)
CHEBI:190228 (1)
CHEBI:89679 (1)
CHEBI:190225 (1)
CHEBI:90458 (1)
CHEBI:190223 (1)
CHEBI:190221 (1)
CHEBI:137127 (1)
CHEBI:186031 (1)

Metabolite Name

Betaine (3)
Choline (3)
Taurine (3)
Threonine (3)
Glutamine (3)
Xanthine (3)
Creatinine (3)
Creatine (3)
PC(14:0/20:4) (2)
PC(15:0/22:6) (2)
PE(18:1/22:6) (2)
PE(16:0/20:4) (2)
PC(14:0/18:2) (2)
Cer(d18:1/24:1) (2)
Methanol (2)
Myo-Inositol (2)
Formate (2)
N,N-Dimethylglycine (2)
N-Acetyl-D-glucosamine (2)
D-Galactose (2)
Histidine (2)
PC(14:0/14:0) (2)
Glycine (2)
Glycerol (2)
Trigonelline (2)
Valine (2)
Pyroglutamic acid (2)
Lumichrome (2)
Acetylcysteine (2)
Acetic acid (2)

First Public Date

2014 (138)
2026 (97)
2024 (95)
2025 (91)
2023 (79)
2020 (64)
2017 (59)
2022 (54)
2021 (48)
2019 (48)
2018 (38)
2013 (35)
2016 (30)
2015 (28)

Lab affiliation

VetMedZg Laboratory,Faculty of Veterinary Medicine, University of Zagreb, Zagreb, Croatia Institute of Biodiversity, Animal Health & Comparative Medicine, College of Medicine, Veterinary Medicine and Life Sciences, University of Glasgow, Glasgow, UK (3)
Department of Molecular Tropical Medicine and Genetics, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand (3)
Department of Biochemistry and Immunology, Universidade Federal de Minas Gerais (2)
VetMedZg Laboratory,Faculty of Veterinary Medicine, University of Zagreb, Zagreb, Croatia Institute of Biodiversity, Animal Health & Comparative Medicine, College of Medicine, Veterinary Medicine and Life Sciences, University of Glasgow, Glasgow, UK (2)
Institute of genetics and developmental biology (2)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Science4Life, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands (2)
University of Edinburgh, Institute of Genetics and Molecular Medicine, Edinburgh, Scotland, United Kingdom, EH4 2XR (2)
Center for Molecular Medicine University Medical Center Utrecht Utrecht 3584CG The Netherlands (2)
Department of Convergence Medicine, Convergence Medicine Research Center/Biomedical Research Center, Asan Medical Center, Asan Institute for Life Sciences, University of Ulsan College of Medicine, 88 Olympic-ro 43-gil, Songpa-gu, Seoul 05505, Republic of Korea. (2)
Medical Proteomics Unit, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkok, Thailand (2)
VetMedZg Laboratory,Faculty of Veterinary Medicine, University of Zagreb, Zagreb, Croatia Institute of Biodiversity, Animal Health & Comparative Medicine, College of Medicine, Veterinary Medicine and Life Sciences, University of Glasgow, Glasgow, UK (2)
Medical Bioanalytics Institute for Ophthalmic Research Eberhard-Karls University of Tuebingen (2)
Department of Physiology, Wayne State University (1)
Department of Clinical Sciences, Swedish University of Agricultural Sciences, Uppsala, Sweden. (1)
Department of Clinical Sciences, and Clinical Pathology Laboratory, University Animal Hospital, Swedish University of Agricultural Sciences, Uppsala, Sweden. (1)
The Art Institute of Chicago, Conservation and Science, Chicago, United States (1)
IPMC/CNRS (1)
Department of Clinical Sciences, Cornell University, Ithaca, NY, USA Department of Surgical and Radiological Sciences, School of Veterinary Medicine, University of California-Davis, Davis, CA, USA (1)
Center for Molecular Medicine, University Medical Center Utrecht and Utrecht University, Utrecht, The Netherlands (1)
Group Leader, Proteomics of Cellular Signaling, Luxembourg Institute of Health (1)
Institute of Parasitology, Vetsuisse Faculty, University of Zurich, Winterthurerstrasse 266a, 8057 Zurich, Switzerland (1)
INVESTIGADOR PRINCIPAL (1)
Department of Biology Lineberger Comprehensive Cancer Center University of North Carolina at Chapel Hill (1)
Institute of Veterinary Pharmacology and Toxicology, Vetsuisse Faculty, University of Zurich, Winterthurerstr. 260, 8057 Zurich, Switzerland (1)
ERA Chair laboratory, Internal Diseases Clinic, Faculty of Veterinary Medicine, University of Zagreb, Croatia (1)
Dept. of Oncology-Pathology, Karolinska Institutet, SciLifeLab, Stockholm, Sweden (1)
Department of Pharmacy Uppsala University Box 580 SE-751 23 Uppsala, Sweden (1)
Clinical Diagnostic Laboratory, Department of Clinical Veterinary Medicine, Vetsuisse Faculty, University of Bern, Bern, Switzerland. (1)
Laboratoire Réponse Inflammatoire et Spectrométrie de Masse (PRISM), Inserm U1192 - Université de Lille, Faculté des Sciences, Campus Cité Scientifique, Bât SN3, 1er étage, F-59655 Villeneuve d’Ascq Cedex. Phone: +33 (0)3 20 43 41 94; Fax: +33 (0)3 20 43 40 54 (1)
Principal investigator of HRZZ-UIP-2019-04-2178 SECRET project (1)

Tags

pathogen (11)
pathogen:bacterium (8)
xref:PubMed:32075271 (7)
xref:PubMed:29104227 (7)
xref:PubMed:22470468 (7)
xref:PubMed:33798453 (5)
xref:PubMed:39911479 (4)
xref:PubMed:40661172 (4)
xref:PubMed:38778091 (4)
xref:PubMed:24330828 (3)
xref:PubMed:35280134 (3)
xref:PubMed:27519604 (3)
xref:PubMed:28193671 (3)
xref:PubMed:37406108 (3)
xref:PubMed:23555299 (2)
xref:PubMed:33989303 (2)
xref:PubMed:42329896 (2)
xref:PubMed:37923722 (2)
xref:PubMed:32218455 (2)
xref:PubMed:40167508 (2)
xref:PubMed:33031589 (2)
xref:PubMed:33961622 (2)
xref:PubMed:39619201 (2)
xref:PubMed:42706237 (2)
xref:PubMed:38026637 (2)
xref:PubMed:39932553 (2)
xref:PubMed:41719989 (2)
xref:PubMed:33983928 (2)
xref:PubMed:34635775 (2)
xref:PubMed:24995881 (2)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Classification

bacteria (8)
viruses (2)
fungi (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (1)

Study type

Transcription profiling by array (125)
RNA-seq of coding RNA (27)
Comparative genomic hybridization by array (18)
Genotyping by array (16)
RNA-seq of non coding RNA (9)
DNA-seq (8)
ChIP-seq (6)
RNA-seq of coding RNA from single cells (6)
Unknown experiment type (4)
Other (4)
Methylation profiling by high throughput sequencing (4)
RNA-seq of total RNA (3)
Animal - One-color microarray (2)
Animal - High-throughput sequencing (2)
Bisulfite-seq (2)
MicroRNA profiling by array (2)
Proteomic profiling by array (2)
Animal - Methylation microarray (1)
Cell line - Two-color microarray (1)
Tiling path by array (1)
MeDIP-seq (1)
Cell line - One-color microarray (1)
Cell line - High-throughput sequencing (1)
MicroRNA profiling by high throughput sequencing (1)

Release Date

2013 (51)
2020 (48)
2023 (46)
2022 (45)
2010 (43)
2025 (42)
2014 (42)
2016 (37)
2015 (36)
2021 (32)
2012 (31)
2024 (30)
2019 (29)
2018 (29)
2017 (22)
2011 (21)
2008 (12)
2009 (11)
2026 (7)
2007 (6)
2005 (3)
2006 (1)
2004 (1)

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Lung Lipidomic Alterations in Beagle Dogs Infected with Toxocara canis

Toxocariasis, mainly caused by Toxocara canis, and to a lesser extent, Toxocara cati, is a neglected parasitic zoonosis. The mechanisms that underlie the changes in lipid metabolism of T. canis infection in Beagle dogs' lungs remain unclear. Lipidomics is a rapidly emer...

2023-08-21 | MTBLS5583 | MetaboLights

Lipidomic Changes in the Liver of Beagle Dogs Associated with Toxocara canis Infection

In this study, lipid alterations in Beagle dog’s liver caused by Toxocara canis infection were investigated by using liquid chromatography with tandem mass spectrometry at 12 hours post infection (hpi), 24 hpi and 36 days post infection (dpi). A total of 6 categories and 42 subclasses of...

2022-08-30 | MTBLS4015 | MetaboLights

Canis lupus familiaris

Canis lupus familiaris Exome

PRJNA385156 | ENA

Canis lupus familiaris

Canis lupus familiaris Metagenome

PRJNA1143167 | ENA

Canis lupus familiaris

transcriptome of Canis lupus familiaris

PRJNA302374 | ENA

Canis lupus familiaris

Canis lupus familiaris Targeted Locus (Loci)

PRJNA947486 | ENA

Canis lupus familiaris

Canis lupus familiaris Raw sequence reads

PRJNA1130140 | ENA

Canis lupus familiaris

Canis lupus familiaris Raw sequence reads

PRJNA1115202 | ENA

Canis lupus familiaris

Canis lupus familiaris Raw sequence reads

PRJNA1481016 | ENA

Canis lupus familiaris

miRNA sequencing of Canis lupus familiaris

PRJNA305157 | ENA

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