Cao John J - OmicsDI

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UNIPROT ID/AC

Q9Z2G0 (1)
Q9Z1P5 (1)
Q9Z183 (1)
Q9Z175 (1)
Q9Z0X0 (1)
Q9Z0P7 (1)
Q9Z0L0 (1)
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Q9JKN1 (1)
Q9JK92 (1)
Q9JJA9 (1)
Q9JHT5 (1)
Q9JHH9 (1)
Q9ET78 (1)
Q9ESN5 (1)

ENSEMBL ID

ENSMUSP00000140201 (1)
ENSMUSP00000069525 (1)
ENSMUSP00000141637 (1)
ENSMUSG00000027651 (1)
ENSMUSG00000021039 (1)
ENSMUSP00000141097 (1)
ENSMUSG00000098557 (1)

CHEBI ID

CHEBI:16344 (2)
CHEBI:26271 (2)
CHEBI:25094 (2)
CHEBI:17822 (2)
CHEBI:18237 (2)
CHEBI:29016 (2)
CHEBI:17126 (2)
CHEBI:16990 (2)
CHEBI:174087 (1)
CHEBI:138394 (1)
CHEBI:71049 (1)
CHEBI:73696 (1)
CHEBI:38036 (1)
CHEBI:134612 (1)
CHEBI:16247 (1)
CHEBI:52057 (1)
CHEBI:136618 (1)
CHEBI:38460 (1)
CHEBI:144461 (1)
CHEBI:27890 (1)
CHEBI:207013 (1)
CHEBI:199053 (1)
CHEBI:160829 (1)
CHEBI:138391 (1)
CHEBI:188435 (1)
CHEBI:84755 (1)
CHEBI:162596 (1)
CHEBI:162045 (1)
CHEBI:25347 (1)
CHEBI:73569 (1)

Metabolite Name

P-Phenolsulfonic acid (1)
Pentamethylene Bisacetamide (1)
Methylindole (1)
Ketoisovalerate (1)
Bilirubin IXa (1)
7-oxoglycodeoxycholate (1)
2-hydroxybenzenesulfonic acid (1)
12-aminododecanoic acid (1)
3-dehydrotetradecasphinganine (1)
FMC-5(d18:1/22:0) (1)
13-methyl-4,4-bisnor-8,11,13-podocarpatrien-3-one (1)
3-Cresotinic acid (1)
Glycerol 1-(5-hydroxydodecanoate) (1)
Lanthionine (1)
5-Oxo-delta-bilirubin (1)
(9Z,12Z)-3-hydroxyhexadecadienoylcarnitine (1)
6-Methoxyquinoline (1)
2-aminobutyric acid (1)
Phenol sulfate (1)
Succinylacetoacetate (1)
P-cresol sulfate (1)
PC(18:1(9Z)/0:0) (1)
SM(d18:2/24:0) (1)
Vaccenyl carnitine (1)
(7Z,10Z)-hexadecadienoylcarnitine (1)
LysoPC(16:0) (1)
SM(d18:2/14:0) (1)
Dopamine 3-O-sulfate (1)
2-Hydroxy-3-methylbutyric acid (1)
Alpha-Ketoglutarate (1)

IsPrivate

False (1)

Modelling Approach

Stochastic differential equation model (1)
Ordinary differential equation model (1)

Study type

Transcription profiling by array (54)
RNA-seq of coding RNA from single cells (7)
RNA-seq of coding RNA (6)
ChIP-seq (5)
Unknown experiment type (3)
RNA-seq of non coding RNA (2)
ChIP-chip by tiling array (1)
Transcription profiling by tiling array (1)
Transcription profiling by RT-PCR (1)
Comparative genomic hybridization by array (1)
ATAC-seq (1)
ScATAC-seq (1)
Methylation profiling by high throughput sequencing (1)

Release Date

2010 (30)
2022 (24)
2021 (21)
2024 (19)
2025 (17)
2023 (14)
2018 (13)
2020 (11)
2012 (10)
2016 (9)
2014 (9)
2019 (9)
2011 (8)
2008 (8)
2006 (7)
2013 (6)
2007 (6)
2015 (5)
2017 (5)
2005 (3)
2009 (2)
2004 (1)

Lab affiliation

Tumor Biology Department Molecular Medicine Program Moffitt Cancer Center Tampa, FL, USA (3)
Centre for medicines discovery, University of Oxford (1)
Tumor Biology Moffitt Cancer Center Tampa, FL, USA (1)
CRUK - Beatson Institute for Cancer Research - Switchback Rd, Bearsden, Glasgow G61 1BD - United Kingdom (1)
Drug Discovery Moffitt Cancer Center Tampa, FL, USA (1)

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Dietary folate depletion and repletion in A/J and C57BL/6J mice

Defects in homocysteine and folate metabolism are associated with increased risks for neural tube and congenital heart defects, cardiovascular disease and stroke, cancers, and neurodegeneration. In many but not all cases, dietary supplementation with folate significantly reduces the severity and in...

ORGANISM(S): Mus musculus

2008-08-27 | E-GEOD-9242 | biostudies-arrayexpress

P12365 - A/J COPD - Parenchyma

Chronic Obstructive Pulmonary Disease (COPD) is a respiratory disorder that is the result of extended exposure of the airways to noxious stimuli, principally cigarette smoke (CS). The mechanisms through which COPD evolves are not fully understood though it is believed that the disease process includ...

ORGANISM(S): Mus musculus

2014-05-14 | E-MTAB-1426 | biostudies-arrayexpress

Dietary folate depletion and repletion

This SuperSeries is composed of the following subset Series: GSE9242: Dietary folate depletion and repletion in A/J and C57BL/6J mice GSE9243: Dietary folate depletion and repletion in C57BL/6J mice, ApoE knockout mice, and choline supplemented C57BL/6J mice Keywords: SuperSeries Refer to individual...

ORGANISM(S): Mus musculus

2010-06-20 | E-GEOD-9245 | biostudies-arrayexpress

S. coelicolor M145 SMM medium time course study (Culture # 2)

Antibiotic biosynthesis in Streptomyces species is controlled by a complex genetic and biochemical network of global and pathway specific regulators. Details of their precise interactions in mediating temporal and spatial expression of secondary metabolite genes remain poorly defined. In this study,...