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ProteomicsNannochloropsis data LC-MS/MS - Transcriptomic and proteomic responses to very low CO2 suggest multiple carbon concentrating mechanisms in Nannochloropsis oceanica
Analysis of the CO2 pathway under high and low carbon supply in Nannochloropsis oceanica Imet1
ORGANISM(S): Nannochloropsis oceanica strain IMET1 
2019-11-12 | PXD010030 | Pride
Carbon metabolism High/low carbon Nannochloropsis 
UnknownPyrenoid loss impairs carbon-concentrating mechanism induction and alters primary metabolism in Chlamydomonas reinhardtii.
Not available
S-EPMC5853466 | biostudies-literature
UnknownThe evolution of inorganic carbon concentrating mechanisms in photosynthesis.
Not available
S-EPMC2606764 | biostudies-literature
UnknownRoles of second messengers in the regulation of cyanobacterial physiology: the carbon-concentrating mechanism and beyond.
Not available
S-EPMC10117731 | biostudies-literature
GenomicsCo-existence of CBB cycle and rTCA carbon fixation pathway in thermophilic Actinomycetota Carbonactinospora thermoautotrophica StC and correlation with the CO2-concentrating microcompartment
Co-existence of CBB cycle and rTCA carbon fixation pathway in thermophilic Actinomycetota Carbonactinospora thermoautotrophica StC and correlation with the CO2-concentrating microcompartment
PRJNA1095924 | ENA
TranscriptomicsComparison of carboxysomal (ccmM) and photorespiratory (glcD1/D2) mutants of Synechocystis sp. PCC 6803 using metabolic and transcriptomic phenotyping
The general acclimation of cyanobacteria to low carbon (LC) conditions includes coordinated alterations of gene expression and metabolism. To analyze possible signals for LC sensing and compensating reactions, we compared wild-type (WT) cells with two mutants of Synechocystis, the carboxysome-less m...
ORGANISM(S): Synechocystis sp. PCC 6803 
2011-12-30 | E-GEOD-31672 | biostudies-arrayexpress
ProteomicsNannochloropsis data LC-MS/MS for CA mutant and WT
Analysis of the CO2 pathway under high carbon supply in Nannochloropsis oceanica Imet1 which compares the WT with a generated carboanhydrase 2 knockdown mutant
ORGANISM(S): Nannochloropsis oceanica strain IMET1 
2022-02-28 | PXD010076 | Pride
Nannochloropsis Carbon concentrating metabolism Carbon metabolism Mutant Carboanhydrase 
TranscriptomicsCo-existence of CBB cycle and rTCA carbon fixation pathway in thermophilic Actinomycetota Carbonactinospora thermoautotrophica StC and correlation with the CO2-concentrating microcompartment
Seven carbon autotrophic fixation pathways were described so far. However, it is not common to find the co-existence of more than one cycle in a single cell. Here, we describe a thermophilic bacterium Carbonactinospora thermoautotrophica StC with a unique and versatile carbon metabolism. StC was iso...
ORGANISM(S): Carbonactinospora thermoautotrophica 
2024-04-09 | GSE263135 | GEO
ProteomicsCP12 controls ribulose 1,5 bisphosphate recycling and carbon acquisition in Chlamydomonas reinhardtii
The small chloroplastic protein CP12 has multiple functions, including the regulation of enzymes in the Calvin-Benson-Bassham cycle. Here, we investigated its role in the acclimation of Chlamydomonas reinhardtii to varying CO2 availability. This alga has a CO2 concentrating mechanism that increases ...
ORGANISM(S): Chlamydomonas reinhardtii 
2026-02-16 | PXD065761 | Pride
Chlamydomonas reinhardtii Pyrenoid Rubisco Co₂ concentrating mechanism Phosphoribulokinase Cp12 
UnknownInvolvement of the cynABDS operon and the CO2-concentrating mechanism in the light-dependent transport and metabolism of cyanate by cyanobacteria.
Not available
S-EPMC1797288 | biostudies-literature
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