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ProteomicsA promiscuous mechanism to phase separate eukaryotic carbon fixation
Absolute peak-intensity-based quantification and relative DIA-based quantification data pertaining to the paper A promiscuous mechanism to phase separate eukaryotic carbon fixation
ORGANISM(S): Chlorella Sorokiniana (ncbitaxon:3076) 
2023-07-28 | MSV000092548 | MassIVE
TranscriptomicsFixK, a universal regulator of microaerobic growth, controls photosynthesis in Rhodopseudomonas palustris
Facultative phototrophic bacteria are excellent models for analyzing the coordination of major metabolic traits including oxidative phosphorylation, photophosphorylation, carbon dioxide fixation and nitrogen fixation. In Rhodobacter sphaeroides and R. capsulatus, a two-component system called RegBA ...
ORGANISM(S): Rhodopseudomonas palustris 
2010-08-15 | E-GEOD-6742 | biostudies-arrayexpress
GenomicsDark carbon fixation in stratified boreal lakes water column
Dark carbon fixation in stratified boreal lakes water column
PRJEB76863 | ENA
GenomicsAn ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria
An ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria
PRJNA944967 | ENA
GenomicsExceeding Conventional Maximum Carbon Yields via Heterotrophic CO2 Fixation
Exceeding Conventional Maximum Carbon Yields via Heterotrophic CO2 Fixation
PRJNA1395478 | ENA
TranscriptomicsResponse of Prochlorococcus to varying CO2:O2 ratios
Carbon fixation plays a central role in determining cellular redox poise, increasingly understood to be a key parameter in cyanobacterial physiology. In the cyanobacterium Prochlorococcus--—the most abundant phototroph in the oligotrophic oceans--—the carbon-concentrating mechanism (CCM) is reduced...
ORGANISM(S): Prochlorococcus marinus subsp. pastoris str. CCMP1986 
2015-04-15 | E-GEOD-65684 | biostudies-arrayexpress
TranscriptomicsCo-expression analysis reveals distinct alliances around two carbon fixation pathways in hydrothermal vent symbionts
Biological carbon fixation is foundational to the biosphere. Most autotrophs are thought to possess one carbon fixation pathway. The hydrothermal vent tubeworm Riftia pachyptila’s chemoautotrophic symbionts, however, possess two functional pathways: the Calvin Benson-Bassham (CBB) and the reductive ...
ORGANISM(S): Candidatus Endoriftia persephonae 
2024-03-28 | GSE249345 | GEO
TranscriptomicsExceeding Conventional Maximum Carbon Yields via Heterotrophic CO2 Fixation
Maximizing carbon yields is crucial in the microbial production of diverse biochemicals. However, microorganisms, particularly heterotrophs, release carbon dioxide (CO2) during the oxidation of organic compounds for energy and building blocks. This metabolism limits the theoretical maximum carbon yi...
ORGANISM(S): Escherichia coli W 
2026-06-18 | GSE315248 | GEO
TranscriptomicsAn ATP-sensitive phosphoketolase regulates carbon fixation in cyanobacteria
Regulation of CO2 fixation in cyanobacteria is important both for the organism and the global carbon balance. Here we show that phosphoketolase in Synechococcus elongatus PCC7942 (SeXPK) possesses a distinct ATP sensing mechanism, which upon ATP drops, allows SeXPK to divert precursors of the RuBisC...
ORGANISM(S): Synechococcus elongatus 
2023-08-08 | GSE227397 | GEO
GenomicsCo-expression analysis reveals distinct alliances around two carbon fixation pathways in hydrothermal vent symbionts
Co-expression analysis reveals distinct alliances around two carbon fixation pathways in hydrothermal vent symbionts
PRJNA1048833 | ENA
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