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TranscriptomicsTranscription profiling of human hypopharyngeal cancer samples
Gene expression analysis of a unique HNSCC (Head and Neck Squamous Cell Carcinoma) localization, the hypopharynx. Four normal and 34 tumor samples were analysed using Affymetrix HG-U95A microarrays containing probe sets representing ~12650 distinct transcription features.
ORGANISM(S): Homo sapiens 
2007-08-25 | E-GEOD-2379 | biostudies-arrayexpress
TranscriptomicsExpression data from Arabidopsis mature siliques
Analysis of the transcriptomes of nearly ripe siliques (18-19 DAP) of the rdo2-1, rdo3 and hub1-2 (rdo4) mutants in comparison with wild-type Ler, using Affymetrix GeneChip Arabidopsis ATH1 Genome Array. The experiment includes rdo2, rdo3, and rdo4 as well the Ler genotypes with three biological rep...
ORGANISM(S): Arabidopsis thaliana 
2011-04-08 | E-GEOD-28446 | biostudies-arrayexpress
TranscriptomicsComparison of histone deacetylase 9-1 mutant (SALK_001723) dry seed transcriptome with Col wild-type
Analysis of the transcriptome of dry hda9-1 mutant seeds with those of Col wild-type seeds, using Affymetrix GeneChip Arabidopsis ATH1 Genome Array. The hda9-1 mutant has reduced primary seed dormancy. We used microarrays to dissect which genes are differentially expressed in the hda9-1 mutant to st...
ORGANISM(S): Arabidopsis thaliana 
2014-09-21 | E-GEOD-50786 | biostudies-arrayexpress
TranscriptomicsExpression data from mouse embryonic stem cells
Analysis of the transcriptome of ß-catenin flox/- mES cells in comparison with ß-catenin null mES cells or ß-catenin null mES cells stably transfected with an E-cadherin-?-catenin fusion protein. Expression assay was performed using the Affymetrix GeneChip Mouse Gene 1.0 ST array. The experiment inc...
ORGANISM(S): Mus musculus 
2013-05-03 | E-GEOD-44543 | biostudies-arrayexpress
GenomicsBarcoding reveals complex clonal dynamics of de novo transformed human mammary cells
Most human breast cancers have already diversified genomically when they first become clinically evident, by which time extensive heterogeneous histopathologies, transcriptomes and growth patterns are also apparent. Accordingly, important initial events and the cellular context in which they occur h...
EGAS00001001310 | EGA
GenomicsEaves_12_breast_dataset - samples
Mammary cell samples from donors 28/32/33. Contains 12 MiSeq sequence files and 12 alignment files derived from HiSeq runs.
EGAD00001001439 | EGA
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