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Unknown
(22057)
Genomics
(647)
Transcriptomics
(607)
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(310)
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(59)
Other
(9)
Models
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Clinical
(8)
Methylation profiling
(8)
Organisms
Homo sapiens
(441)
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(188)
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(19)
Arabidopsis thaliana
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Danio rerio
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(1)
Nostoc sp. PCC 7120 = FACHB-418
(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
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(1)
Salmonella enterica subsp. enterica serovar Enteritidis
(1)
Macaca mulatta
(1)
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(1)
Organisms
Homo sapiens
(236)
Mus musculus
(74)
hot springs metagenome
(21)
Aspergillus niger
(6)
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sediment metagenome
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microbial fuel cell metagenome
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rhizosphere metagenome
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Pterocryptis cochinchinensis
(2)
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(2)
Micromonas pusilla CCMP1545
(2)
Beauveria bassiana
(2)
drinking water metagenome
(2)
Archangium sp. Cb G35
(2)
sludge metagenome
(2)
Drosophila melanogaster
(2)
Vitis vinifera
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Gallus gallus
(2)
Oryza sativa Japonica Group
(2)
Achromobacter xylosoxidans A8
(1)
Burkholderia pseudomallei CB
(1)
Enterococcus cecorum
(1)
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(1)
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(1)
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(1)
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Repository
ENA
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biostudies-arrayexpress
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pride
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geo
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EVA
(1)
Tissue
Cell culture
(59)
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(11)
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(10)
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(10)
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(9)
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(8)
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(4)
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(3)
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(1)
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(1)
Disease
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(9)
Disease free
(7)
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(5)
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(5)
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(4)
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(2)
Normal
(2)
Not Available
(2)
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(2)
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(2)
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(2)
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(2)
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(2)
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(2)
Wounds and Injuries
(2)
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(2)
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(2)
Infected with Leishmania amazonensis
(1)
Carcinoma
(1)
Neoplasm, Residual
(1)
Hematologic Neoplasms
(1)
Carcinoma, Renal Cell
(1)
Irritable bowel syndrome
(1)
Priapism
(1)
Age related macular degeneration 1
(1)
Limb ischemia
(1)
B-cell adult acute lymphocytic leukemia
(1)
Female reproductive organ cancer
(1)
Frontotemporal dementia
(1)
Colorectal carcinoma
(1)
Technology Type
Mass Spectrometry
(260)
Shotgun proteomics
(150)
Mass spectrometry
(44)
Bottom-up proteomics
(42)
Data-dependent acquisition
(26)
Affinity purification coupled with mass spectrometry proteomics
(24)
Gel-based experiment
(19)
SWATH MS
(16)
Data-independent acquisition
(15)
Top-down proteomics
(7)
Mass spectrometry assay
(6)
Chemical cross-linking coupled with mass spectrometry proteomics
(6)
SRM/MRM
(4)
NMR spectroscopy
(2)
ESI
(2)
DiaPASEF
(2)
Affymetrix 6.0, Illumina Genome Analyzer II
(1)
Illumina HiSeq 2000, Illumina_2.5M
(1)
Illumina MiSeq
(1)
Illumina HiSeq 2000, ILLUMINA
(1)
Illumina Genome Analyzer II
(1)
Mass spectrometry imaging
(1)
Immunopeptidomics
(1)
MSE
(1)
All-ion fragmentation
(1)
Instrument Platform
Illumina NovaSeq 6000
(13)
LTQ Orbitrap Velos
(7)
NextSeq 500
(6)
Q Exactive
(6)
Illumina NovaSeq X
(4)
Illumina HiSeq 2500
(4)
Illumina HiSeq 2000
(4)
Illumina HiSeq 4000
(4)
Q Exactive HF
(4)
LTQ Orbitrap
(4)
Q Exactive Plus
(3)
Illumina Genome Analyzer
(2)
Illumina Genome Analyzer II
(2)
Scanning hardware
(2)
6520A Quadrupole Time-of-Flight LC/MS
(2)
Instrument
(2)
Fragment Analyzer, Qubit assay
(1)
Agilent DNA Microarray Scanner Model #G2565BA
(1)
Genepix
(1)
ScanArray Express HT [PerkinElmer]
(1)
Axon GenePix 4000B scanning hardware
(1)
NA
(1)
N/a
(1)
HiSeq X Ten
(1)
Illumina MiSeq
(1)
NextSeq 550
(1)
Illumina HiSeq 3000
(1)
-
(1)
LTQ FT
(1)
MaXis
(1)
Publication Date
2025
(78)
2014
(78)
2024
(77)
2012
(69)
2013
(67)
2010
(62)
2023
(55)
2022
(55)
2011
(55)
2016
(53)
2015
(52)
2021
(52)
2020
(52)
2026
(47)
2019
(46)
2018
(33)
2017
(33)
2009
(30)
2008
(26)
2007
(9)
2005
(7)
2006
(7)
2004
(2)
UNIPROT ID/AC
sp|TRY1_BOVIN|
(7)
sp|TRYP_PIG|
(6)
sp|RS27A_HUMAN|
(6)
sp|K2C1_HUMAN|
(6)
sp|K22E_HUMAN|
(6)
sp|K1C9_HUMAN|
(6)
sp|K1C10_HUMAN|
(6)
sp|ALBU_HUMAN|
(6)
sp|ALBU_BOVIN|
(6)
sp|K1C15_SHEEP|
(5)
sp|CAS1_BOVIN|
(5)
sp|ADH1_YEAST|
(5)
sp|KRHB6_HUMAN|
(4)
sp|SYH_HUMAN|
(4)
sp|HBA_HUMAN|
(4)
sp|KRHB4_HUMAN|
(4)
sp|K1M1_SHEEP|
(4)
sp|K1H6_HUMAN|
(4)
sp|K1H2_HUMAN|
(4)
sp|CASB_BOVIN|
(4)
sp|PPIA_HUMAN|
(3)
sp|TRFL_HUMAN|
(3)
sp|KRHB5_HUMAN|
(3)
sp|K2M3_SHEEP|
(3)
sp|K2M2_SHEEP|
(3)
sp|K1M2_SHEEP|
(3)
sp|HBB_HUMAN|
(3)
sp|K1HB_HUMAN|
(3)
sp|K1H5_HUMAN|
(3)
sp|CASK_BOVIN|
(3)
CHEBI ID
CHEBI:30769
(13)
CHEBI:6650
(10)
CHEBI:17368
(10)
CHEBI:28300
(9)
CHEBI:17822
(9)
CHEBI:33508
(9)
CHEBI:18183
(9)
CHEBI:15428
(9)
CHEBI:18211
(9)
CHEBI:17754
(8)
CHEBI:17750
(8)
CHEBI:16704
(8)
CHEBI:15741
(8)
CHEBI:17992
(8)
CHEBI:16919
(8)
CHEBI:17191
(8)
CHEBI:28842
(8)
CHEBI:15756
(8)
CHEBI:69081
(7)
CHEBI:25017
(7)
CHEBI:30915
(7)
CHEBI:18237
(7)
CHEBI:16856
(7)
CHEBI:16566
(7)
CHEBI:16359
(7)
CHEBI:17154
(7)
CHEBI:16335
(7)
CHEBI:30887
(6)
CHEBI:116314
(6)
CHEBI:17561
(6)
Metabolite Name
Adenosine
(8)
Guanine
(7)
Glycine
(7)
Hypoxanthine
(7)
Creatine
(7)
Phytosphingosine
(6)
L-Proline
(6)
Citric acid
(6)
Sphinganine
(5)
Pyroglutamic acid
(5)
Spermidine
(5)
Cholic acid
(5)
Glutamine
(5)
L-Phenylalanine
(5)
Cytidine
(5)
Tris(2-butoxyethyl) phosphate
(4)
Allantoic acid
(4)
Galactose
(4)
CDP
(4)
Glycolic acid
(4)
Valine
(4)
ADP
(4)
Succinate
(4)
Glutamine
(4)
Tryptophan
(4)
Oxidized glutathione
(4)
Ibuprofen
(4)
Succinyladenosine
(4)
Betaine
(4)
Uracil
(4)
First Public Date
2025
(68)
2024
(65)
2014
(60)
2023
(55)
2026
(48)
2019
(41)
2022
(40)
2021
(39)
2020
(32)
2017
(32)
2018
(20)
2015
(15)
2016
(13)
2013
(11)
2011
(1)
Modelling Approach
Ordinary differential equation model
(2)
Constraint-based model
(1)
Study status
Terminated
(2)
Active, not recruiting
(2)
Completed
(2)
Recruiting
(2)
Lab affiliation
Research Group Mitochondrial Disorders, Institute of Human Genetics, Technische Universität München, München, Germany
(5)
University Hospital Cologne
(5)
Laboratory of RNA Processing and Decay, Institute of Biochemistry and Biophysics, Warsaw, Poland
(3)
Department of Biochemistry, University of Missouri
(2)
Department of Chemistry, University of North Carolina at Chapel Hill
(2)
The Concern Foundation Laboratories at The Lautenberg Center for Immunology and Cancer Research IMRIC, Faculty of Medicine, The Hebrew University, Jerusalem, Israel
(2)
College of Plant Protection, Northwest A&F University
(2)
Charité – Universitätsmedizin Berlin, Department of Biochemistry, 10117 Berlin, Germany; The Francis Crick Institute, Molecular Biology of Metabolism Laboratory, London NW11AT, UK
(2)
Molecular Neuropharmacology and Genetics Laboratory, Department of Neuroscience, Faculty of Health and Medical Sciences, University of Copenhagen, 2200, Denmark
(2)
Helmholtz Centre for Environmental Research GmbH - UFZ Department of Molecular Systems Biology Permoserstraße 15 04318 Leipzig, Germany
(2)
University of North Carolina at Chapel Hill
(2)
School of Chemistry and Molecular Biosciences, The University of Queensland
(2)
BBE, Caltech
(2)
Department of Biology II and Center for Integrated Protein Science Munich (CIPSM), Ludwig-Maximilians-Universität München, Planegg-Martinsried, Germany
(2)
J. Craig Venter Institute, Rockville, MD 20850
(2)
DZNE Munich, Neuroproteomics, Feodor-Lynen-Str. 17, 81377 München, Germany
(2)
Head of Proteomics
(2)
Macquarie Medical School Macquarie University Australia Sydney 2109
(1)
Cambridge Centre for Proteomics, Department of Biochemistry, University of Cambridge, Cambridge, CB2 1QR UK
(1)
Dr. Jörn Dengjel Prof. for Biochemistry and Cell Biology Department of Biology, University of Fribourg Chemin du Musée 10, 1700 Fribourg, Switzerland, T +41 26 300 8631, E joern.dengjel@unifr.ch, F +41 26 300 9741
(1)
Department of Developmental, Molecular and Chemical Biology Tufts University School of Medicine Boston MA 02111
(1)
Max-Planck of Biochemistry, Experimental Systems Immunology Germany
(1)
Immunopathology of Virus Infections Institute of Virology Technical University of Munich Schneckenburgerstr. 8 D-81675 Munich, Germany tel: +49 (0) 89 4140 9270
(1)
Director, Duke Molecular Physiology Institute, Professor Departments of Medicine (Division of Endocrinology, Metabolism, and Nutrition) and Pharmacology & Cancer Biology Duke University Medical Center
(1)
The Francis Crick Institute, Molecular Biology of Metabolism laboratory, London, United Kingdom; Department of Biochemistry and Cambridge Systems Biology Centre, University of Cambridge, Cambridge, United Kingdom; Department of Biochemistry, Charité Universitaetsmedizin Berlin, Berlin, Germany
(1)
Dept. of Laboratory Medicine, University of California, San Francisco
(1)
Forschungszentrum Juelich ZEA-3 Analytics
(1)
Department of Pathology Beth Israel Deaconess Medical Center Harvard Medical School, Boston, MA, 02115, USA.
(1)
Institute for Molecular Medicine I Medical Faculty Heinrich-Heine-University Duesseldorf Universitaetsstrasse 1 40225 Duesseldorf Germany
(1)
LIST-ERIN-ERTP-Green Tech platform Belvaux, LUXEMBOURG
(1)
Tags
pathogen
(13)
pathogen:bacterium
(7)
pathogen:fungus
(6)
Keyword
CB-839
(2)
Cetuximab
(2)
PIK3CA
(1)
Tumor Metabolism
(1)
Glutaminase Inhibitor
(1)
Telaglenastat
(1)
DNA Damage
(1)
DNA Repair
(1)
Homologous recombination deficiency
(1)
HRD
(1)
BRCA 1
(1)
BRCA 2
(1)
PARP Inhibitor
(1)
Cyclophosphamide
(1)
Fludarabine
(1)
Fludarabine phosphate
(1)
Talazoparib
(1)
Advanced solid tumours
(1)
Haematological malignancies
(1)
Phase I/II
(1)
NOTCH pathway
(1)
Pan-NOTCH inhibitor
(1)
Capecitabine
(1)
Irinotecan
(1)
Panitumumab
(1)
Leucovorin
(1)
Bevacizumab
(1)
Fluorouracil
(1)
Oxaliplatin
(1)
IsPrivate
False
(4)
Model Flag
Non Kinetic
(2)
Classification
bacteria
(7)
fungi
(6)
Modification
15.994915
(2)
57.021464
(2)
-18.010565
(1)
-17.026549
(1)
42.010565
(1)
4-tetrahydrothiazine-3-carboxylic acid
(1)
Not available
(1)
Study type
Transcription profiling by array
(275)
RNA-seq of coding RNA
(71)
ChIP-seq
(18)
Comparative genomic hybridization by array
(12)
RNA-seq of coding RNA from single cells
(11)
Unknown experiment type
(10)
Methylation profiling by array
(10)
Other
(8)
Interventional
(7)
RNA-seq of non coding RNA
(6)
Methylation profiling by high throughput sequencing
(5)
ChIP-chip by tiling array
(4)
ChIP-chip by array
(3)
Genotyping by array
(3)
Transcription profiling by RT-PCR
(3)
High-throughput sequencing
(2)
MeDIP-seq
(1)
Human - High-throughput sequencing
(1)
Cell line - High-throughput sequencing
(1)
MicroRNA profiling by array
(1)
DNA-seq
(1)
Proteomic profiling by array
(1)
RNA-seq of total RNA
(1)
Observational
(1)
Release Date
2022
(2221)
2021
(2187)
2023
(2070)
2024
(1777)
2020
(1768)
2025
(1747)
2019
(1477)
2018
(1343)
2017
(1172)
2016
(1131)
2015
(1001)
2014
(860)
2013
(629)
2012
(583)
2011
(522)
2010
(476)
2009
(372)
2026
(285)
2008
(284)
2007
(177)
2006
(131)
2005
(92)
2004
(48)
2003
(38)
2002
(32)
2000
(22)
2001
(18)
1999
(16)
1998
(16)
1997
(8)
Location
United States
(7)
Italy
(2)
South Korea
(1)
Germany
(1)
France
(1)
Spain
(1)
Netherlands
(1)
United Kingdom
(1)
Switzerland
(1)
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Burkholderia pseudomallei CB strain:CB
Burkholderia pseudomallei CB strain:CB Genome sequencing and assembly
PRJNA188497
|
ENA
Cite
beta proteobacterium CB
Beta proteobacterium CB Genome
PRJNA178293
|
ENA
Cite
Archangium violaceum Cb vi76
Archangium violaceum Cb vi76 Genome sequencing and assembly
PRJNA221595
|
ENA
Cite
Sulfitobacter sp. CB-A
Sulfitobacter sp. CB-A Genome sequencing and assembly
PRJNA445298
|
ENA
Cite
Archangium sp. Cb G35
Archangium sp. Cb G35 Genome sequencing and assembly
PRJNA353849
|
ENA
Cite
Archangium sp. Cb G35
Archangium sp. Cb G35 response to methyljasmonate exposure
PRJNA555342
|
ENA
Cite
Bacillus amyloliquefaciens strain:CB
Bacillus amyloliquefaciens strain:CB Genome sequencing and assembly
PRJNA592051
|
ENA
Cite
Longimicrobium terrae strain:CB-286315
Longimicrobium terrae strain:CB-286315 Genome sequencing and assembly
PRJNA629516
|
ENA
Cite
Asticcacaulis excentricus CB 48 strain:CB 48
Bacterium that undergoes asymmetric cell division and differentiation
PRJNA32595
|
ENA
Cite
Ochrobactrum sp. px-cb
Ochrobactrum sp. px-cb Genome sequencing and assembly
PRJNA296439
|
ENA
Cite
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