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Unknown
(324)
Transcriptomics
(146)
Genomics
(32)
Proteomics
(25)
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(5)
Models
(1)
Other
(1)
Organisms
Mus musculus
(66)
Rattus norvegicus
(37)
Homo sapiens
(35)
Andropogon gerardi
(21)
Bacteria
(21)
Bartonella quintana JK 31
(21)
Canis lupus familiaris
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Cnidaria
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Ensifer adhaerens
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Halictus scabiosae
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Human alphaherpesvirus 1 strain 17
(21)
Human alphaherpesvirus 1 strain KOS
(21)
Human betaherpesvirus 5
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Human herpesvirus 2 strain 186
(21)
Rhodospirillum rubrum
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Pseudomonas putida
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Agrobacterium tumefaciens
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Ixodes ricinus
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Capra hircus
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Fundulus heteroclitus
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Propionibacterium freudenreichii subsp. shermanii
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Brassica napus
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Rattus rattus
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Oncorhynchus mykiss
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Sus scrofa
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Arabidopsis thaliana
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Moxostoma hubbsi
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Danio rerio
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Organisms
Homo sapiens
(5)
Populus sp.
(3)
Campylobacter coli JL-CDD-LMH
(1)
Moxostoma hubbsi
(1)
Agrobacterium tumefaciens
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chicken gut metagenome
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Danio rerio
(1)
mouse gut metagenome
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Mus musculus
(1)
Repository
biostudies-arrayexpress
(147)
ENA
(24)
pride
(21)
geo
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Skeletal muscle myoblast
(1)
Uterine fluid
(1)
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(1)
Disease
Arrhythmias and right ventricular dysfunction
(1)
Sham surgery
(1)
Developmental and epileptic encephalopathy 2
(1)
Neurodevelopmental abnormality
(1)
Skeletal muscle atrophy
(1)
Zika virus congenital syndrome
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Technology Type
Mass Spectrometry
(21)
Bottom-up proteomics
(9)
Shotgun proteomics
(9)
Data-dependent acquisition
(6)
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(3)
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(3)
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Instrument Platform
Illumina NovaSeq 6000
(3)
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Liquid Chromatography MS - negative - reverse-phase
(2)
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Kodak EDAS 290
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AB SOLiD System
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ScanArray Express HT [PerkinElmer]
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Illumina HiSeq 1500
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(1)
ABSciex Triple TOF5600
(1)
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(1)
Liquid Chromatography MS - Alternating (LC-MS (Alternating))
(1)
Liquid Chromatography MS -
(1)
Liquid Chromatography MS - positive - reverse-phase
(1)
Liquid Chromatography MS - positive - reverse phase
(1)
Liquid Chromatography MS - negative - reverse phase
(1)
Publication Date
2014
(26)
2012
(21)
2010
(18)
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(13)
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(12)
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(10)
2026
(10)
2011
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(6)
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2006
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2018
(1)
CHEBI ID
CHEBI:17126
(3)
CHEBI:28867
(3)
CHEBI:15428
(3)
CHEBI:73024
(3)
CHEBI:18211
(3)
CHEBI:16737
(3)
CHEBI:27897
(3)
CHEBI:86077
(2)
CHEBI:18067
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(2)
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(2)
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(2)
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(2)
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(2)
CHEBI:15682
(2)
CHEBI:17553
(2)
CHEBI:44215
(2)
CHEBI:16440
(2)
CHEBI:18053
(2)
Metabolite Name
Taurine
(3)
Inosine
(3)
Lipoic Acid
(2)
Citraconic Acid
(2)
Diazoxide
(2)
Palmitoleic Acid
(2)
4-Hydroxy-2-oxoglutaric acid
(2)
Taurocholic Acid
(2)
Palmitic Acid
(2)
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(2)
Tryptophol
(2)
1-Pyrroline-2-carboxylic acid
(2)
D-Fructose
(2)
2-Hydroxybenzaldehyde
(2)
Norvaline
(2)
Glycine
(2)
4-Nitrophenol
(2)
Uracil
(2)
Betaine
(2)
Citramalic Acid
(2)
N-Acetylneuraminic Acid
(2)
Lumichrome
(2)
Citrulline
(2)
Carnosine
(2)
Glutathione
(2)
N-Acetylglycine
(2)
D-Erythrose 4-phosphate
(2)
Purine
(2)
2-Phosphoglyceric acid
(2)
Oleic Acid
(2)
First Public Date
2026
(6)
2025
(4)
2018
(3)
2016
(3)
2024
(2)
2022
(2)
2015
(2)
2023
(1)
2014
(1)
Modelling Approach
Computational model
(1)
Lab affiliation
Program in Molecular Medicine, UMass Chan Medical School
(2)
Université Paris Cité, INSERM, CNRS, Institut Cochin, F-75014 Paris, France
(2)
Associate Professor, Stem Cells and Regenerative Medicine Centre, Yenepoya Research Centre, Yenepoya (Deemed to be University), Deralakatte, Mangalore, Karnataka (State),India (C)
(1)
Biochemistry
(1)
Biozentrum, University of Basel, Klinglebergstrasse 50/70, CH-4056 Basel
(1)
Centro Científico y Tecnológico de Excelencia Ciencia & Vida, Fundación Ciencia & Vida, Santiago, Chile. Instituto Milenio de Oceanografía (IMO), Universidad de Concepción, Concepción, Chile.
(1)
Department of Biochemistry and Pharmacology, The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Victoria 3010, Australia.
(1)
Department of Ecogenomics and Systems Biology, Plant-Systems Interaction Group, University of Vienna
(1)
Department of Physiology, Faculty of Veterinary, University of Murcia, Campus Mare Nostrum, IMIB-Arrixaca, Murcia, Spain
(1)
Genecology Research Centre, University of the Sunshine Coast
(1)
Institute of Paulownia, Henan Agricultural University, Zhengzhou, Henan, 450002, P. R. China
(1)
Instituto de Biofísica Carlos Chagas Filho, Universidade Federal do Rio de Janeiro, Brazil and UNIGRANRIO-Universidade do Grande Rio, Caxias, Rio de Janeiro-Brazil
(1)
Laboratory of Protein Chemistry - Proteomic Unit Department of Biochemistry, Institute of Chemistry, UFRJ Av. Athos da Silveira Ramos, 149, CT, Bl. A, 543, Cidade Universitária 21941-909, Rio de Janeiro, RJ, Brazil Ph: 55 21 39388266 / 55 21 39387353 Laboratory of Proteomics (LabProt) - LADETEC, Institute of Chemistry Av. Horácio Macedo, 1281, Polo de Química, Bl. C, Lab. 324, Cidade Universitária, 21941-598, Rio de Janeiro, RJ, Brazil
(1)
Molecular Parasitology and Entomology Unit,Laboratory of Malaria and Vector Research, National Institutes of Health. USA.
(1)
Molecular Parasitology and Entomology Unit; Laboratory of Malaria and Vector Research; National Institutes of Health
(1)
Newcastle University Biosciences Institute Faculty of Medical Sciences Framlington Place Newcastle upon Tyne NE2 4HH UK
(1)
Program in Molecular Medicine UMass Chan Medical School Worcester MA 01605 USA
(1)
Protein Biochemistry and Structural Biology Laboratory, National Institute of Malaria Research (ICMR), New Delhi, INDIA
(1)
The Francis Crick Institute
(1)
Tags
xref:PubMed:42616792
(2)
xref:ArrayExpress:E-MTAB-4593
(1)
xref:PubMed:30620265
(1)
xref:PubMed:40649845
(1)
xref:PubMed:38302740
(1)
xref:PubMed:40930428
(1)
xref:PubMed:41963441
(1)
pathogen
(1)
pathogen:bacterium
(1)
IsPrivate
False
(1)
Submitter Keywords
Ersilia
(1)
FAIR-AIML
(1)
Machine Learning Model
(1)
Classification
bacteria
(1)
Modification
-17.026549
(1)
10.008269
(1)
15.994915
(1)
42.010565
(1)
45.029395
(1)
57.021464
(1)
6.020129
(1)
Study type
Transcription profiling by array
(97)
Comparative genomic hybridization by array
(12)
RNA-seq of coding RNA
(10)
ChIP-seq
(7)
Transcription profiling by tiling array
(3)
RNA-seq of coding RNA from single cells
(3)
Unknown experiment type
(2)
Animal - High-throughput sequencing
(2)
Methylation profiling by array
(2)
Human - Two-color microarray
(1)
Animal - One-color microarray
(1)
ChIP-chip by tiling array
(1)
Translation profiling
(1)
Cell line - High-throughput sequencing
(1)
ChIP-chip by array
(1)
Other
(1)
Methylation profiling by high throughput sequencing
(1)
RNA-seq of non coding RNA
(1)
Release Date
2022
(46)
2025
(40)
2021
(39)
2024
(39)
2023
(38)
2014
(34)
2012
(31)
2019
(28)
2010
(22)
2020
(20)
2016
(20)
2013
(20)
2015
(18)
2011
(14)
2018
(12)
2009
(12)
2017
(10)
2008
(8)
2007
(8)
2006
(4)
2005
(3)
2026
(2)
2004
(1)
2003
(1)
2002
(1)
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Campylobacter coli JL-CDD-LMH
Campylobacter coli JL-CDD-LMH Genome sequencing and assembly
PRJNA196811
|
ENA
Cite
CDD: NCBI's conserved domain database.
Not available
S-EPMC4383992
|
biostudies-literature
Cite
Predicting gene ontology functions from ProDom and CDD protein domains.
Not available
S-EPMC187511
|
biostudies-literature
Cite
Initial Validation and Reliability of the CDKL5 Deficiency Disorder Hand Function Scale (CDD-Hand).
Not available
S-EPMC9149062
|
biostudies-literature
Cite
Inhibition of the
Clostridioides difficile
Class D β-Lactamase CDD-1 by Avibactam.
Not available
S-EPMC8826747
|
biostudies-literature
Cite
Generation and characterization of human induced pluripotent stem cells (iPSCs) from three male and three female patients with CDKL5 Deficiency Disorder (CDD).
Not available
S-EPMC8953930
|
biostudies-literature
Cite
CDKL5 Deficiency Disorder (CDD)-Rare Presentation in Male.
Not available
S-EPMC9776588
|
biostudies-literature
Cite
The crystal structures of CDD-1, the intrinsic class D β-lactamase from the pathogenic Gram-positive bacterium Clostridioides difficile, and its complex with cefotaxime.
Not available
S-EPMC6903424
|
biostudies-literature
Cite
Effects of the Partial M1 Muscarinic Cholinergic Receptor Agonist CDD-0102A on Stereotyped Motor Behaviors and Reversal Learning in the BTBR Mouse Model of Autism.
Not available
S-EPMC8756088
|
biostudies-literature
Cite
16S rRNA sequencing of fecal DNA extracted from two distinct mouse models of CDKL5 Deficiency Disorder (CDD))
PRJNA1232169
|
ENA
Cite
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