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Transcriptomics
(4201)
Proteomics
(474)
Genomics
(456)
Unknown
(249)
Metabolomics
(133)
Other
(9)
Models
(3)
Multiomics
(2)
Microarray
(2)
Genomic
(1)
Methylation profiling
(1)
Organisms
Mus musculus
(2186)
Homo sapiens
(1634)
Arabidopsis thaliana
(248)
Rattus norvegicus
(156)
Drosophila melanogaster
(70)
Saccharomyces cerevisiae
(68)
Hordeum vulgare
(36)
Bos taurus
(28)
Escherichia coli
(26)
Zea mays
(21)
Danio rerio
(21)
Sus scrofa
(20)
Glycine max
(16)
Pseudomonas aeruginosa
(16)
Caenorhabditis elegans
(14)
Triticum aestivum
(13)
Gallus gallus
(13)
Oryza sativa
(10)
Medicago truncatula
(9)
Carassius auratus
(8)
Macaca mulatta
(7)
Xenopus laevis
(7)
Vitis vinifera
(7)
Mycobacterium tuberculosis
(5)
Oryza sativa Japonica Group
(5)
Schizosaccharomyces pombe
(5)
Pan troglodytes
(4)
Rhodospirillum rubrum
(3)
Macaca nemestrina
(3)
Callithrix jacchus
(3)
Organisms
Homo sapiens
(27)
Mus musculus
(6)
Rattus norvegicus
(4)
Arabidopsis thaliana
(2)
Thermoactinomyces vulgaris
(1)
Euglena mutabilis
(1)
Phaeodactylum tricornutum
(1)
Populus tomentosa
(1)
Burkholderia cepacia
(1)
Schizosaccharomyces pombe 972h-
(1)
Drosophila melanogaster
(1)
Gossypium hirsutum
(1)
Caenorhabditis elegans
(1)
Toxoplasma gondii
(1)
human gut metagenome
(1)
Repository
biostudies-arrayexpress
(4595)
MassIVE
(265)
MetaboLights
(132)
jPOST
(100)
iProX
(54)
ENA
(53)
PanoramaPublic
(35)
EGA
(20)
geo
(19)
PAXDB
(9)
pride
(5)
GPMDB
(4)
Cell Collective
(3)
LINCS
(2)
NODE
(2)
dbGaP
(1)
GNPS
(1)
Tissue
Cell culture
(2)
Blood
(1)
HCC tumor
(1)
Blood plasma
(1)
Bone marrow
(1)
Permanent cell line cell
(1)
Disease
Normal
(40)
Multiple myeloma
(4)
Chronic myelogenous leukemia
(3)
Prostate cancer
(3)
Colorectal Carcinoma
(2)
Apparently healthy
(2)
Rheumatoid arthritis
(2)
Acute lymphoblastic leukemia
(2)
Colon carcinoma
(2)
Head and neck squamous cell carcinoma
(2)
Tumor
(2)
Lymphoma
(2)
Carcinoma
(2)
Lung cancer
(2)
"obesity, diabetes"
(1)
Adenocaricinoma
(1)
High risk B-precurser acute lymphoblastic leukemia
(1)
"lung disease: control, Diagnosis: non-small cell squamous cell carcinoma"
(1)
Aviremic HIV
(1)
Nurr1 lentivirus
(1)
Insulitis and diabetes
(1)
4T1 tumor-bearing
(1)
HIV-associated dementia
(1)
Monoclonal gammopathy of undetermined significance (MGUS)
(1)
LPS-induced acute lung injury
(1)
Anaplastic large cell lymphoma has DiseaseStaging II
(1)
Locally advanced breast carcinoma (LABC; non-inflammatory)
(1)
Wilms' tumor
(1)
Bladder carcinoma
(1)
Breast Carcinoma
(1)
Technology Type
Mass spectrometry
(86)
Mass spectrometry assay
(45)
Mass Spectrometry
(5)
Mass spectrometry
(2)
SWATH-MS
(2)
NMR spectroscopy
(2)
Bottom-up proteomics
(2)
Shotgun proteomics
(2)
ILLUMINA, Illumina HiSeq 2500, HiSeq X Ten
(1)
ILLUMINA, Illumina HiSeq 2000
(1)
NMR spectroscopy assay
(1)
Data-dependent acquisition
(1)
SRM/MRM
(1)
Instrument Platform
Illumina NovaSeq 6000
(54)
NextSeq 500
(49)
Illumina HiSeq 2000
(44)
Illumina HiSeq 2500
(40)
Illumina HiSeq 4000
(36)
Affymetrix Fluidics Station 400
(12)
NextSeq 2000
(10)
Illumina MiSeq
(9)
Illumina HiSeq 1500
(8)
Element AVITI
(7)
418 [Affymetrix]
(7)
Illumina NovaSeq X
(7)
NextSeq 550
(7)
Affymetrix GeneChip(R) HT Scanner
(6)
G2500A Hewlett Packard
(5)
GeneChip Scanner 3000 [Affymetrix]
(4)
Illumina Genome Analyzer IIx
(4)
ScanArray 5000 [PerkinElmer]
(3)
Sony SH800
(2)
Affymetrix GeneChip Scanner 3000 (GCS3000)
(2)
Illumina BeadArray reader
(2)
Affymetrix GeneChip Scanner 3000 7G
(2)
Other
(2)
G2565BA DNA microarray scanner [Agilent]
(2)
GenePix 4000B [Axon Instruments]
(2)
Illumina HiSeq 1000
(2)
BGISEQ-500
(2)
Illumina HiSeq 3000
(2)
Hamamatsu Nanozoomer S60
(1)
Eppendorf EpMotion 5073m pipetting robot
(1)
Publication Date
2008
(715)
2013
(458)
2010
(448)
2015
(440)
2014
(431)
2012
(389)
2011
(382)
2009
(337)
2016
(268)
2007
(164)
2024
(155)
2022
(122)
2023
(107)
2006
(104)
2025
(100)
2020
(93)
2018
(79)
2026
(76)
2005
(73)
2021
(72)
2017
(58)
2019
(56)
2004
(46)
2003
(7)
UNIPROT ID/AC
14310_ARATH
(4)
14332_ARATH
(4)
14333_ARATH
(4)
14335_ARATH
(4)
14337_ARATH
(4)
14339_ARATH
(4)
1A110_ARATH
(4)
1A112_ARATH
(4)
2A5A_ARATH
(4)
2A5B_ARATH
(4)
2A5D_ARATH
(4)
2A5G_ARATH
(4)
2A5Z_ARATH
(4)
2AAA_ARATH
(4)
2AAB_ARATH
(4)
2AAG_ARATH
(4)
2AB2A_ARATH
(4)
2AB2B_ARATH
(4)
2AB2E_ARATH
(4)
2ABB_ARATH
(4)
2SS2_ARATH
(4)
3702.AT2G25210.1
(4)
3702.AT2G36485.1
(4)
3702.AT3G18270.1
(4)
3702.AT5G08670.1
(4)
3702.AT5G65770.2
(4)
3HID1_ARATH
(4)
3HID2_ARATH
(4)
3HID3_ARATH
(4)
3HIDH_ARATH
(4)
CHEBI ID
CHEBI:17822
(22)
CHEBI:30769
(21)
CHEBI:15756
(20)
CHEBI:28300
(19)
CHEBI:28044
(19)
CHEBI:15741
(19)
CHEBI:15428
(19)
CHEBI:18237
(18)
CHEBI:27897
(18)
CHEBI:26271
(17)
CHEBI:18186
(17)
CHEBI:25017
(17)
CHEBI:27266
(17)
CHEBI:22660
(16)
CHEBI:6650
(16)
CHEBI:17351
(16)
CHEBI:16811
(15)
CHEBI:25094
(15)
CHEBI:16865
(15)
CHEBI:33508
(15)
CHEBI:16449
(15)
CHEBI:17368
(15)
CHEBI:17992
(14)
CHEBI:26986
(14)
CHEBI:24898
(14)
CHEBI:28842
(14)
CHEBI:22653
(14)
CHEBI:16335
(14)
CHEBI:16708
(13)
CHEBI:17568
(13)
Metabolite Name
Succinic acid
(25)
Proline
(23)
Creatine
(23)
Valine
(22)
Citric acid
(22)
Inosine
(22)
Hypoxanthine
(22)
Leucine
(21)
Uric acid
(21)
Xanthine
(21)
Uridine
(21)
Allantoin
(20)
Pantothenic acid
(20)
Malic acid
(20)
Serine
(20)
Adenosine
(20)
Taurine
(19)
Isoleucine
(19)
Azelaic acid
(19)
Tryptophan
(19)
Hippuric acid
(19)
Glycine
(18)
Deoxycholic acid
(18)
Threonine
(18)
Glutamine
(18)
Benzoic acid
(17)
Taurocholic acid
(17)
Glyceric acid
(17)
Fructose
(17)
Phenylalanine
(17)
First Public Date
2014
(19)
2020
(7)
2018
(7)
2015
(5)
2025
(4)
2026
(2)
2022
(2)
2019
(2)
2017
(2)
2024
(1)
2023
(1)
2016
(1)
Classification
protozoa
(1)
bacteria
(1)
Study type
Transcription profiling by array
(3284)
RNA-seq of coding RNA
(329)
ChIP-seq
(302)
Unknown experiment type
(108)
Comparative genomic hybridization by array
(80)
Methylation profiling by high throughput sequencing
(70)
Other
(55)
Genotyping by array
(42)
RNA-seq of coding RNA from single cells
(37)
RNAi profiling by array
(32)
RNA-seq of non coding RNA
(25)
Transcription profiling by tiling array
(22)
Methylation profiling by array
(20)
ChIP-chip by tiling array
(19)
ChIP-chip by array
(19)
Cell line - High-throughput sequencing
(12)
ATAC-seq
(11)
DNA-seq
(11)
CUT&RUN
(9)
Transcription profiling by RT-PCR
(8)
Proteomic profiling by array
(8)
RNA-seq of total RNA
(8)
Animal - One-color microarray
(7)
MicroRNA profiling by array
(7)
Cell line - One-color microarray
(5)
High-throughput sequencing
(5)
Animal - High-throughput sequencing
(4)
Bisulfite-seq
(4)
Hi-C
(4)
Transcription profiling by SAGE
(3)
Release Date
2008
(715)
2013
(461)
2010
(451)
2015
(440)
2014
(436)
2012
(396)
2011
(386)
2009
(343)
2016
(264)
2007
(170)
2006
(106)
2022
(90)
2005
(75)
2020
(64)
2018
(58)
2021
(57)
2023
(56)
2019
(50)
2024
(49)
2017
(47)
2004
(47)
2025
(43)
2026
(33)
2003
(7)
Lab affiliation
Centro de Biotecnología y Genómica de Plantas (CBGP) UPM-INIA/CSIC, Campus de Montegancedo. Autopista M40 (km 38). 28223 Madrid, Spain.
(1)
Director of Bioinformatics and Proteomics, Meharry Medical College; Adjunct Associate Professor, Department of Biomedical Informatics, Vanderbilt University Medical Center
(1)
LAQV, REQUIMTE, Department of Chemical Sciences, Faculty of Pharmacy, University of Porto, Porto, Portugal
(1)
Laboratory of Molecular Microbiology and Biotechnology, Department of Biology, Faculty of Sciences, University of Chile, Santiago, Chile.
(1)
University of Vienna, Faculty of Chemistry, Department of Analytical Chemistry
(1)
Tags
xref:PubMed:29724730
(4)
xref:PubMed:31168962
(4)
xref:PubMed:29986096
(4)
xref:PubMed:32755574
(3)
xref:PubMed:40059827
(2)
xref:PubMed:32762937
(2)
xref:PubMed:19029902
(2)
xref:PubMed:25848952
(2)
xref:PubMed:23144294
(2)
xref:PubMed:23700430
(2)
pathogen
(2)
xref:PubMed:32315657
(1)
xref:PubMed:30909634
(1)
xref:PubMed:20233458
(1)
xref:PubMed:31678167
(1)
xref:PubMed:40103584
(1)
xref:PubMed:21378118
(1)
xref:PubMed:21266183
(1)
xref:PubMed:23680677
(1)
xref:PubMed:22954801
(1)
xref:PubMed:25794680
(1)
xref:PubMed:24662816
(1)
xref:PubMed:22986747
(1)
xref:PubMed:21883236
(1)
xref:PubMed:33179594
(1)
xref:PubMed:38465231
(1)
xref:PubMed:23178508
(1)
xref:PubMed:23474986
(1)
xref:PubMed:22930730
(1)
xref:PubMed:23435894
(1)
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Thermoactinomyces vulgaris strain:CDF
Thermoactinomyces vulgaris strain:CDF Genome sequencing
PRJNA285030
|
ENA
Cite
Metal transport mechanism of the cation diffusion facilitator (CDF) protein family - a structural perspective on human CDF (ZnT)-related diseases.
Not available
S-EPMC8341793
|
biostudies-literature
Cite
Sequence similarity and functional relationship among eukaryotic ZIP and CDF transporters.
Not available
S-EPMC5053974
|
biostudies-literature
Cite
Phylogenetic and functional analysis of the Cation Diffusion Facilitator (CDF) family: improved signature and prediction of substrate specificity.
Not available
S-EPMC1868760
|
biostudies-literature
Cite
Bacterial magnetosome biomineralization--a novel platform to study molecular mechanisms of human CDF-related Type-II diabetes.
Not available
S-EPMC4018254
|
biostudies-literature
Cite
Molecular Transducers of Human Skeletal Muscle Remodeling under Different Loading States [CDF: GC_M_HTA_5utr_Grch38,binary.cdf]
Molecular Transducers of Human Skeletal Muscle Remodeling under Different Loading States [CDF: GC_M_HTA_5utr_Grch38,binary.cdf]
PRJNA656204
|
ENA
Cite
Molecular Transducers of Human Skeletal Muscle Remodeling under Different Loading States [CDF: GC_M_HTA_3utr_Grch38,binary.cdf]
Molecular Transducers of Human Skeletal Muscle Remodeling under Different Loading States [CDF: GC_M_HTA_3utr_Grch38,binary.cdf]
PRJNA656376
|
ENA
Cite
The GI-CDF module of Arabidopsis affects freezing tolerance and growth as well as flowering.
Not available
S-EPMC5006856
|
biostudies-literature
Cite
Molecular Transducers of Human Skeletal Muscle Remodeling under Different Loading States [CDF: Muscle_genome-build-id_ENST_binary]
Molecular Transducers of Human Skeletal Muscle Remodeling under Different Loading States [CDF: Muscle_genome-build-id_ENST_binary]
PRJNA656203
|
ENA
Cite
Inclusion complex of novel curcumin analogue CDF and β-cyclodextrin (1:2) and its enhanced in vivo anticancer activity against pancreatic cancer.
Not available
S-EPMC3868989
|
biostudies-literature
Cite
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