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Transcriptomics
(26868)
Genomics
(5001)
Proteomics
(1569)
Unknown
(1216)
Metabolomics
(268)
Models
(48)
Other
(29)
Multiomics
(20)
Genomic
(1)
Methylation profiling
(1)
Organisms
Homo sapiens
(14494)
Mus musculus
(8625)
Arabidopsis thaliana
(984)
Drosophila melanogaster
(953)
Saccharomyces cerevisiae
(839)
Rattus norvegicus
(826)
Caenorhabditis elegans
(489)
Danio rerio
(270)
Escherichia coli
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Bos taurus
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Schizosaccharomyces pombe
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Gallus gallus
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Sus scrofa
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Candida albicans
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Pseudomonas aeruginosa
(69)
Xenopus laevis
(66)
Zea mays
(65)
Escherichia coli str. K-12 substr. MG1655
(64)
Macaca mulatta
(63)
Mycobacterium tuberculosis
(62)
Oryza sativa
(54)
Medicago truncatula
(49)
Triticum aestivum
(48)
Staphylococcus aureus
(47)
Canis lupus familiaris
(47)
Glycine max
(44)
Bacillus subtilis
(34)
Chlamydomonas reinhardtii
(33)
Dictyostelium discoideum
(29)
Oryza sativa Japonica Group
(29)
Organisms
Homo sapiens
(363)
Mus musculus
(194)
Arabidopsis thaliana
(24)
Rattus norvegicus
(23)
Saccharomyces cerevisiae
(18)
Caenorhabditis elegans
(17)
Drosophila melanogaster
(9)
Solanum lycopersicum
(6)
Danio rerio
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Gallus gallus
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Sus scrofa
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Mus
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Xenopus laevis
(2)
Schizosaccharomyces pombe
(2)
Gossypium hirsutum
(2)
Bos taurus
(2)
Geobacillus sp. E263
(1)
Saccharum hybrid cultivar Q117
(1)
Capitella teleta
(1)
Mnemiopsis leidyi
(1)
Lobatocerebrum sp. CEL-2015
(1)
Loxomitra sp. CEL-2019
(1)
Dicyemida sp. CEL-2019
(1)
Lepidodermella sp. CEL-2015
(1)
Gnosonesimida sp. IV CEL-2015
(1)
Austrognathia sp. CEL-2015
(1)
Kronborgia cf. amphipodicola CEL-2015
(1)
Macrostomum cf. ruebushi CEL-2015
(1)
Repository
biostudies-arrayexpress
(29204)
EGA
(1819)
MassIVE
(939)
ENA
(775)
jPOST
(274)
MetaboLights
(267)
geo
(188)
PAXDB
(97)
LINCS
(82)
PeptideAtlas
(80)
iProX
(73)
PanoramaPublic
(46)
pride
(27)
Cell Collective
(25)
FAIRDOMHub
(23)
EVA
(8)
dbGaP
(1)
GNPS
(1)
Tissue
Others
(43)
Female Reproductive System
(8)
Male Reproductive System
(8)
Cell culture
(5)
Hepatocyte
(4)
Spleen
(3)
Liver
(2)
Lung
(2)
Blood plasma
(2)
Dendritic cell
(2)
Tear
(2)
Digestive System
(1)
Kidney
(1)
Pancreas
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Bile
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Blood
(1)
Blood cell
(1)
Brain
(1)
Breast
(1)
Breast cancer cell line
(1)
Colon
(1)
Conjunctival epithelium
(1)
Endothelial cell of umbilical vein
(1)
Erythrocyte
(1)
Fibroblast
(1)
Flower
(1)
Keratinocyte
(1)
Kidney
(1)
Macrophage
(1)
Regional part of brain
(1)
Disease
Normal
(137)
Breast cancer
(20)
Adenocarcinoma
(12)
Neuroblastoma
(11)
Colorectal adenocarcinoma
(9)
Prostate cancer
(9)
Osteosarcoma
(8)
Multiple myeloma
(8)
Colon cancer
(7)
Cancer
(7)
Breast carcinoma
(6)
Acute myeloid leukemia
(6)
Hepatocellular carcinoma
(6)
Colorectal cancer
(5)
Ovarian cancer
(5)
Rheumatoid arthritis
(4)
Squamous cell carcinoma
(4)
Chronic myeloid leukemia
(4)
Chronic myelogenous leukemia
(4)
Glioblastoma
(4)
None
(4)
Carcinoma
(4)
Asthma
(3)
Erythroleukemia
(3)
Healthy
(3)
Acute lymphoblastic leukemia
(3)
Colon carcinoma
(3)
Colorectal carcinoma
(3)
Colon adenocarcinoma
(3)
Reference
(3)
Technology Type
Illumina HiSeq 2000
(19)
ILLUMINA, Illumina HiSeq 2500
(6)
Illumina HiSeq 2500, ILLUMINA
(5)
Illumina HiSeq 2500
(5)
Illumina HiSeq 2000, ILLUMINA
(5)
Illumina Genome Analyzer II
(5)
ILLUMINA, NextSeq 500
(3)
Illumina HiSeq 4000, ILLUMINA
(3)
Illumina HiSeq 4000, Illumina HiSeq 2500, ILLUMINA
(3)
ILLUMINA, Illumina HiSeq 2000
(3)
Illumina MiSeq
(3)
ILLUMINA, HiSeq X Ten
(2)
Illumina MiSeq, ILLUMINA
(2)
Illumina HiSeq 2500, Illumina MiSeq
(2)
Illumina HiSeq 2000, ILLUMINA, Illumina HiSeq 2500
(2)
Illumina HiSeq 2000, Illumina Genome Analyzer II
(2)
Illumina MiSeq, Illumina HiSeq 2000
(2)
Illumina HiSeq 2500, ILLUMINA, Affymetrix GeneChip Scanner 3000 7g
(1)
Illumina MiSeq, Illumina HiSeq 2500, ILLUMINA
(1)
Illumina CytoSNP 12 bead array, nanostring
(1)
ILLUMINA, Illumina Genome Analyzer IIx, Illumina HiSeq 2500
(1)
Illumina HiSeq 2000, ILLUMINA, Affymetrix SNP 6.0
(1)
HiSeq X Five, ILLUMINA
(1)
ILLUMINA, NextSeq 500, Illumina HiSeq 2000
(1)
Illumina HiSeq 4000, Illumina HiSeq4000, ILLUMINA
(1)
Infinium_OmniExpress-24v1.0
(1)
ILLUMINA, Illumina HiSeq 4000
(1)
Illumina HiSeq 2500, ILLUMINA, NextSeq 500
(1)
MeDIP-seq
(1)
Affymetrix SNP 6.0
(1)
Instrument Platform
Illumina NovaSeq 6000
(1114)
NextSeq 500
(664)
Illumina HiSeq 2500
(552)
Illumina HiSeq 4000
(476)
Illumina HiSeq 2000
(401)
NextSeq 550
(179)
Illumina MiSeq
(108)
Illumina NovaSeq X
(106)
NextSeq 2000
(100)
BGISEQ-500
(84)
Illumina HiSeq 1500
(59)
DNBSEQ-T7
(58)
Illumina HiSeq 3000
(47)
DNBSEQ-G400
(41)
Illumina Genome Analyzer IIx
(40)
Illumina Genome Analyzer II
(37)
418 [Affymetrix]
(28)
HiSeq X Ten
(28)
NA
(26)
GenePix 4000B [Axon Instruments]
(22)
Scanning hardware
(22)
N/A
(20)
Affymetrix GeneChip Scanner 3000 7G
(18)
Agilent 2100 Bioanalyzer
(16)
Affymetrix Fluidics Station 400
(15)
Ion Torrent Proton
(15)
Illumina HiSeq 1000
(15)
PromethION
(14)
Axon- GenePix4000B
(13)
10x Genomics Chromium Controller
(13)
Publication Date
2013
(3309)
2008
(2987)
2014
(2931)
2010
(2784)
2015
(2638)
2012
(2570)
2011
(2484)
2016
(1887)
2009
(1813)
2007
(963)
2022
(790)
2023
(783)
2021
(731)
2025
(678)
2024
(642)
2020
(576)
2026
(514)
2019
(496)
2018
(479)
2017
(459)
2006
(306)
2005
(256)
2004
(107)
2003
(21)
2002
(6)
2027
(2)
UNIPROT ID/AC
ATPA_MOUSE
(31)
ATPB_MOUSE
(31)
EF1A1_MOUSE
(31)
ENPL_MOUSE
(31)
G6PI_MOUSE
(31)
GDIB_MOUSE
(31)
HS90A_MOUSE
(31)
MYH9_MOUSE
(31)
TERA_MOUSE
(31)
ACON_MOUSE
(30)
ACTN4_MOUSE
(30)
ALDH2_MOUSE
(30)
ALDOA_MOUSE
(30)
BIP_MOUSE
(30)
C1TC_MOUSE
(30)
DDX1_MOUSE
(30)
EF2_MOUSE
(30)
ENOA_MOUSE
(30)
FLNA_MOUSE
(30)
HS90B_MOUSE
(30)
HSP7C_MOUSE
(30)
PABP1_MOUSE
(30)
PDIA3_MOUSE
(30)
PGK1_MOUSE
(30)
SAHH_MOUSE
(30)
SPTB2_MOUSE
(30)
SPTN1_MOUSE
(30)
TCPB_MOUSE
(30)
TLN1_MOUSE
(30)
UBA1_MOUSE
(30)
ENSEMBL ID
ENSG00000170477
(62)
ENSG00000229353
(34)
ENSG00000147251
(19)
ENSG00000247315
(15)
ENSG00000204131
(3)
ENSG00000176092
(2)
CHEBI ID
CHEBI:30769
(71)
CHEBI:15428
(60)
CHEBI:16027
(59)
CHEBI:17568
(57)
CHEBI:16708
(56)
CHEBI:16335
(56)
CHEBI:15891
(54)
CHEBI:28044
(53)
CHEBI:32816
(53)
CHEBI:6650
(52)
CHEBI:18012
(52)
CHEBI:16704
(51)
CHEBI:15741
(51)
CHEBI:16919
(49)
CHEBI:17596
(49)
CHEBI:17368
(49)
CHEBI:17822
(48)
CHEBI:25017
(48)
CHEBI:16750
(46)
CHEBI:17154
(46)
CHEBI:26271
(45)
CHEBI:28300
(45)
CHEBI:16695
(45)
CHEBI:30915
(45)
CHEBI:16449
(43)
CHEBI:22660
(42)
CHEBI:27266
(42)
CHEBI:17268
(42)
CHEBI:17562
(42)
CHEBI:24898
(41)
Metabolite Name
Adenosine
(45)
Hypoxanthine
(45)
Taurine
(40)
Adenine
(40)
Uracil
(37)
Xanthine
(36)
Glycine
(35)
Succinic acid
(35)
Guanosine
(35)
Uridine
(35)
Creatine
(35)
Inosine
(34)
Phenylalanine
(32)
Creatinine
(32)
L-Glutamine
(31)
ADP
(30)
Glutamine
(30)
L-Leucine
(30)
Leucine
(29)
AMP
(29)
Choline
(29)
Tyrosine
(29)
Glucose
(29)
Cytidine
(29)
L-Phenylalanine
(29)
Ornithine
(28)
Methionine
(28)
Lysine
(28)
Isoleucine
(28)
Betaine
(27)
First Public Date
2014
(284)
2024
(65)
2015
(54)
2023
(45)
2025
(42)
2019
(41)
2020
(40)
2021
(35)
2018
(35)
2017
(34)
2022
(33)
2026
(30)
2016
(24)
2013
(10)
2010
(2)
2011
(1)
Classification
protozoa
(1)
bacteria
(1)
Modification
Not available
(1)
Study type
Transcription profiling by array
(17671)
RNA-seq of coding RNA
(3236)
ChIP-seq
(1903)
RNA-seq of coding RNA from single cells
(1124)
ChIP-chip by tiling array
(786)
Comparative genomic hybridization by array
(524)
Other
(381)
Methylation profiling by array
(342)
Unknown experiment type
(339)
RNA-seq of non coding RNA
(272)
DNA-seq
(249)
ChIP-chip by array
(239)
Methylation profiling by high throughput sequencing
(235)
Genotyping by array
(210)
Transcription profiling by tiling array
(164)
RNA-seq of total RNA
(143)
Cell line - High-throughput sequencing
(117)
MicroRNA profiling by array
(104)
RNAi profiling by array
(103)
ATAC-seq
(88)
Transcription profiling by RT-PCR
(84)
Animal - High-throughput sequencing
(68)
Single nucleus RNA sequencing
(59)
High-throughput sequencing
(57)
Transcription profiling by SAGE
(47)
Human - High-throughput sequencing
(45)
Proteomic profiling by array
(38)
ScATAC-seq
(36)
Animal - Single-cell sequencing
(32)
Spatial transcriptomics by high-throughput sequencing
(32)
Release Date
2013
(3298)
2008
(2974)
2014
(2848)
2010
(2768)
2015
(2614)
2012
(2554)
2011
(2490)
2009
(1807)
2016
(1806)
2007
(965)
2022
(750)
2023
(730)
2021
(675)
2025
(656)
2024
(549)
2020
(525)
2026
(457)
2019
(424)
2018
(418)
2017
(366)
2006
(294)
2005
(250)
2004
(108)
2003
(20)
2002
(7)
1999
(3)
2000
(2)
Lab affiliation
1 - College of Pharmacy, University of Sharjah, Sharjah 2 - Sharjah Institute for Medical Research, University of Sharjah, Sharjah
(1)
1. School of Pharmaceutical Sciences, Faculty of Medicine, University of Ottawa, Canada. 2.Quadram Institute Bioscience, Norwich Research Park, United Kingdom
(1)
1Centre for New Antibacterial Strategies (CANS) & Research Group for Host-Microbe Interactions, Department of Medical Biology, Faculty of Health Sciences, UiT- The Arctic University of Norway, 9037 Tromsø
(1)
Aarhus University, Denmark
(1)
Associate Professor of Proteomics Departments of Chemistry and Biochemistry | University of Oxford
(1)
Basilbiotech, Incheon, Republic of Korea
(1)
Cancer Biology and Genetics Program, Memorial Sloan Kettering Cancer Center, New York
(1)
Chair of Proteomics and Bioanalytics, Technical University of Munich, Freising, Germany
(1)
Department of Microbiology and Immunology University of Maryland School of Medicine USA
(1)
Department of Plant and Environmental Sciences, Section for Plant Biochemistry, Dynamic Metabolons Group
(1)
Dr. Uwe Linne Philipps-Universität Marburg Fachbereich Chemie und Synmikro Gerätezentrum Massenspektrometrie und Elementanalaytik Hans-Meerwein-Str. 4 35032 Marburg, GERMANY
(1)
Dysmetabolism in Brain Diseases Lab, CEDOC, NOVA Medical School, Universidade NOVA de Lisboa, Rua Câmara Pestana, Nº 6, EdifÃÂcio CEDOC II, Office 2.27, 1150-082 Lisboa, Portugal
(1)
Englander Institute of Precision Medicine Department of Radiation Oncology Weill Cornell Medicine 1300 York Avenue E209 New York, NY 10065
(1)
Englander Institute of Precision Medicine Professor Radiation Oncology Professor Physiology and Biophysics Weill Cornell Medicine 1300 York Avenue Room E215 New York, NY 10065 tel 646-962-2160
(1)
Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland
(1)
Functional Proteomics, ICR
(1)
Griffith University
(1)
Icahn School of Medicine at Mount Sinai
(1)
Mass Spectrometry Laboratory, Mucin Biology Groups,Department of Medical Biochemistry and Cell Biology, University of Gothenburg, Gothenburg, Sweden
(1)
Novo Nordisk Foundation Center for Protein Research
(1)
Proteomics and Metabolomics Facility, University of Nebraska - Lincoln
(1)
Proteomics core facility, Biomedical Research Institute, Seoul National University Hospital
(1)
Roskilde University, Department of Science and Environment, Denmark
(1)
School of Biological Sciences Nanyang Technological University, 60 Nanyang Drive, Singapore 637551
(1)
Sorbonne Université, UMS PASS, Plateforme P3S
(1)
State University of Rio de Janeiro
(1)
UMB
(1)
Tags
xref:PubMed:30096152
(8)
xref:PubMed:31133762
(7)
xref:PubMed:26730594
(5)
xref:PubMed:31211793
(5)
xref:PubMed:30333746
(4)
xref:PubMed:25416952
(4)
xref:PubMed:30111840
(4)
xref:PubMed:20926834
(4)
xref:PubMed:35563726
(3)
xref:PubMed:31168962
(3)
xref:PubMed:32755574
(3)
xref:PubMed:26046463
(3)
xref:PubMed:29986096
(3)
xref:PubMed:17435085
(2)
xref:PubMed:29118979
(2)
xref:PubMed:36247810
(2)
xref:PubMed:29674317
(2)
xref:PubMed:24786080
(2)
xref:PubMed:31541153
(2)
xref:PubMed:20975942
(2)
xref:PubMed:19843695
(2)
xref:PubMed:33003293
(2)
xref:PubMed:28592875
(2)
xref:PubMed:32762937
(2)
xref:PubMed:26862168
(2)
xref:PubMed:26322480
(2)
xref:PubMed:19088304
(2)
xref:PubMed:31797935
(2)
xref:PubMed:27363682
(2)
xref:PubMed:30213928
(2)
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Lepidodermella sp. CEL-2015
Lepidodermella sp. CEL-2015 Transcriptome or Gene expression
PRJNA277639
|
ENA
Cite
Austrognathia sp. CEL-2015
Austrognathia sp. CEL-2015 Transcriptome or Gene expression
PRJNA277630
|
ENA
Cite
Gnosonesimida sp. IV CEL-2015
Gnosonesimida sp. IV CEL-2015 Transcriptome or Gene expression
PRJNA277634
|
ENA
Cite
Dicyemida sp. CEL-2019
Dicyemida sp. CEL-2019 Raw sequence reads
PRJNA531422
|
ENA
Cite
Lobatocerebrum sp. CEL-2015
Lobatocerebrum sp. CEL-2015 Transcriptome or Gene expression
PRJNA289338
|
ENA
Cite
Solenopharyngidae sp. CEL-2015
Solenopharyngidae sp. CEL-2015 Transcriptome or Gene expression
PRJNA277592
|
ENA
Cite
Microdalyellia sp. CEL-2015
Microdalyellia sp. CEL-2015 Transcriptome or Gene expression
PRJNA277602
|
ENA
Cite
Protomonotresidae sp. CEL-2015
Protomonotresidae sp. CEL-2015 Transcriptome or Gene expression
PRJNA277596
|
ENA
Cite
Lehardyia sp. CEL-2015
Lehardyia sp. CEL-2015 Transcriptome or Gene expression
PRJNA277603
|
ENA
Cite
CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq
CEL-Seq2: sensitive highly-multiplexed single-cell RNA-Seq
PRJNA313513
|
ENA
Cite
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