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MetabolomicsGlobal untargeted serum metabolomic analyses nominate metabolic pathways responsive to loss of expression of the orphan metallo beta-lactamase, MBLAC1
The C. elegans gene swip-10 encodes an orphan metallo beta-lactamase that genetic studies indicate is vital for limiting neuronal excitability and viability. Sequence analysis indicates that the mammalian gene Mblac1 is the likely ortholog of swip-10, with greatest sequence identity localized...
2019-03-12 | MTBLS650 | MetaboLights
TranscriptomicsMesenchymal stromal cells isolated from bronchoalveolar lavage and digest parenchymal lung tissue
Stromal support is critical to the achievement of lung homeostasis and the maintenance of an effective epithelial barrier, and yet previous studies have found a positive association between the number of mesenchymal stromal cell populations (MSCs) isolated from the alveolar space and human diseases ...
ORGANISM(S): Homo sapiens 
2016-07-04 | E-GEOD-74284 | biostudies-arrayexpress
TranscriptomicsAdult zebrafish: cornea vs epidermis
Transcriptional profiling of adult zebrafish cornea against epidermis as a reference. Four biological repeats with dye swap (2 chips of 4x44k for 8 data sets).
ORGANISM(S): Danio rerio 
2015-02-19 | E-GEOD-24595 | biostudies-arrayexpress
TranscriptomicsExpression profiling of Irgm1-/- (Lrg-47) HSCs
To assess gene expression changes in Irgm1 (Lrg-47) deficient HSCs Keywords: genetic modification, knockout A total of 6 samples were analyzed: 3 experimental replicates of Irgm1 HSCs were compared with 3 control replicates of WT HSCs
ORGANISM(S): Mus musculus 
2011-06-22 | E-GEOD-11591 | biostudies-arrayexpress
TranscriptomicsComparison of cornea to the surface tissues, dermis and epidermis, in adult zebrafish
The gene expression profile of the adult zebrafish cornea was assessed in comparison to those from closely associated surface tissues: the dermis and epidermis. This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Danio rerio 
2015-02-19 | E-GEOD-24599 | biostudies-arrayexpress
TranscriptomicsAdult zebrafish: cornea vs dermis
Transcriptional profiling of adult zebrafish cornea against dermis as a reference. Three biological repeats with dye swap (6 chips of 1x22k for 6 data sets).
ORGANISM(S): Danio rerio 
2015-02-19 | E-GEOD-24593 | biostudies-arrayexpress
TranscriptomicsContribution of paracrine signalling on dendritic cell activation
The physiological function of the immune system and the response to therapeutic immunomodulators may be sensitive to combinatorial cytokine micro-environments that shape the responses of specific immune cells. Previous work shows that paracrine cytokines released by virus-infected human dendritic ce...
ORGANISM(S): Homo sapiens 
2013-12-15 | E-GEOD-52081 | biostudies-arrayexpress
UnknownMetabolomic Analysis of Liver Tissues for Characterization of Hepatocellular Carcinoma.
Not available
S-EPMC6677583 | biostudies-literature
TranscriptomicsTranscriptional signatures associated with species divergence in New Zealand Pachycladon (Brassicaceae)
Comparative gene expression profiling of a) above-ground tissues of three fruiting species (P. cheesemanii, ch, P. exile, ex, P. novae-zelandiae, nz), b) above-ground tissues of two rosette stage species (P. fastigiatum, fa, P. enysii, en) and c) roots of all five species using heterologous A. thali...
ORGANISM(S): Pachycladon exile 
2009-11-16 | E-GEOD-19017 | biostudies-arrayexpress
ProteomicsMass-spectrometry phosphoproteomics of Calu-3 cell lines infected with SARS-CoV-2, in comparison to non-infected and UV mock-treated cell lines
To identify the proteome alterations in human epithelial cells upon SARS-CoV-2 infection, we performed an in vitro experiment, where we infected lung-adenocarcinoma cultured human airway epithelial cells (Calu-3) with an isolate of the ancestral variant and alpha variant of SARS-CoV-2 in two separat...
ORGANISM(S): Homo sapiens (Human) 
2023-09-01 | PXD040982 | Pride
Covid-19 Phosphosites Ph fractionation Human Sars-cov-2 Calu-3 cell line Infection Phosphoproteomics Lc-ms/ms 
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