Chan Gene G - OmicsDI

Show results for

Unknown (1409)
Transcriptomics (194)
Genomics (80)
Proteomics (72)
Metabolomics (13)

Organisms

Homo sapiens (183)
Mus musculus (49)
Saccharomyces cerevisiae (14)
Arabidopsis thaliana (12)
Bifidobacterium breve UCC2003 (6)
Rattus norvegicus (5)
Drosophila melanogaster (3)
Ruegeria pomeroyi DSS-3 (2)
Glycine max (2)
Brucella abortus str. 2308 A (1)
Helicoverpa zea (1)
Bifidobacterium breve (1)
Phalaenopsis aphrodite subsp. formosana (1)
Candidatus Pelagibacter ubique HTCC1062 (1)
Nicotiana attenuata (1)
Brassica rapa subsp. pekinensis (1)
Tetraodon nigroviridis (1)
Mus musculus domesticus (1)
synthetic construct (1)
Apis mellifera (1)
Schizosaccharomyces pombe (1)
Geobacter sulfurreducens (1)
Francisella tularensis (1)
Mycobacterium tuberculosis (1)
Heterocephalus glaber (1)
Caenorhabditis elegans (1)
Plasmodium falciparum (1)
Pseudomonas aeruginosa (1)
Gallus gallus (1)
gut metagenome (1)

Organisms

Homo sapiens (9)

Repository

biostudies-arrayexpress (209)
EGA (59)
pride (41)
PAXDB (17)
MetaboLights (13)
MassIVE (10)
ENA (9)
PanoramaPublic (2)
PeptideAtlas (1)

Tissue

Cell culture (11)
Hepatocyte (3)
Plant cell (2)
Stem cell (2)
Female Reproductive System (1)
Blood plasma (1)
Breast (1)
Breast cancer cell line (1)
Culture fluid (1)
Embryo (1)
Fibroblast (1)
HEK-293T cell (1)
Heart (1)
Kidney (1)
Liver (1)
Malignant cell (1)
Mammary gland (1)
Oligodendrocyte (1)
Osteoblast (1)
Permanent cell line cell (1)
Root (1)
Tail (1)
Tibia (1)
Type II pneumocyte (1)
Whole body (1)

Disease

Breast cancer (4)
Oligodendroglioma (2)
Type 2 diabetes mellitus (2)
Angiogenic chondrosarcoma (1)
Invasive ductal carcinoma (1)
Acute myeloid leukemia (1)
Acute leukemia (1)
Age related macular degeneration (1)
Cervix carcinoma (1)
Lung cancer (1)
Myocardial ischemia (1)
Skin amelanotic melanoma (1)

Technology Type

Mass Spectrometry (41)
Shotgun proteomics (18)
Bottom-up proteomics (13)
Mass spectrometry (10)
Affinity purification coupled with mass spectrometry proteomics (7)
Mass spectrometry assay (3)
Gel-based experiment (3)
Illumina HiSeq 2000 (2)
SRM/MRM (2)
SWATH MS (2)
ABI_SOLID, Illumina Genome Analyzer IIx, Affymetrix_GenomeWide_SNP6.34 (1)
Illumina HiSeq 2500 (ILLUMINA), AB SOLiD System (ABI_SOLID) (1)
Illumina HiSeq 2500, ILLUMINA (1)
Illumina OmniQuad 2.5 - CNVpartition (1)
Illumina_Infinium_HumanMethylation450, Illumina_HumanHT-12v4 (1)
All-ion fragmentation (1)
Data-dependent acquisition (1)
Data-independent acquisition (1)

Instrument Platform

Illumina HiSeq 2000 (7)
Liquid Chromatography MS - negative - reverse phase (4)
Liquid Chromatography MS - positive - reverse phase (4)
Illumina NovaSeq 6000 (3)
Orbitrap Fusion Lumos (3)
LTQ Orbitrap Elite (2)
LTQ Orbitrap XL (2)
LTQ Orbitrap Velos (2)
6540 Q-TOF LC/MS (Agilent) (2)
Liquid Chromatography MS - alternating - hilic (2)
Pacbio Revio (1)
AB SOLiD 4 System (1)
Illumina Genome Analyzer II (1)
Illumina HiSeq 2500 (1)
Illumina HiSeq 4000 (1)
LTQ Orbitrap Velos Pro (1)
LTQ Velos (1)
Orbitrap Eclipse (1)
Orbitrap Fusion (1)
Q Exactive (1)
Q Exactive HF-X (1)
TimsTOF Pro (1)
Exactive (Thermo Scientific) (1)
Gas Chromatography MS - (1)
Gas Chromatography MS - positive (1)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - negative - hilic (1)
Liquid Chromatography MS - positive - hilic (1)
TSQ Quantum GC (Thermo Scientific) (1)

Publication Date

2010 (39)
2012 (30)
2013 (27)
2020 (22)
2014 (20)
2011 (19)
2015 (16)
2016 (15)
2008 (13)
2026 (12)
2022 (11)
2023 (11)
2024 (11)
2025 (10)
2007 (8)
2009 (7)
2018 (5)
2019 (4)
2006 (4)
2021 (3)
2017 (2)
2005 (1)
2004 (1)
2002 (1)

UNIPROT ID/AC

1433B_HUMAN (17)
1433E_HUMAN (17)
1433F_HUMAN (17)
1433G_HUMAN (17)
1433S_HUMAN (17)
1433T_HUMAN (17)
1433Z_HUMAN (17)
2A5A_HUMAN (17)
2A5D_HUMAN (17)
2A5E_HUMAN (17)
2A5G_HUMAN (17)
2AAA_HUMAN (17)
2ABA_HUMAN (17)
2ABD_HUMAN (17)
3BHS2_HUMAN (17)
3BP1_HUMAN (17)
3BP5L_HUMAN (17)
3HAO_HUMAN (17)
3HIDH_HUMAN (17)
3MG_HUMAN (17)
41_HUMAN (17)
4ET_HUMAN (17)
4F2_HUMAN (17)
5NT3A_HUMAN (17)
5NTC_HUMAN (17)
5NTD_HUMAN (17)
6PGD_HUMAN (17)
6PGL_HUMAN (17)
9606.ENSP00000228938 (17)
9606.ENSP00000233596 (17)

ENSEMBL ID

ENSG00000147251 (1)
ENSG00000170477 (1)
ENSG00000204131 (1)
ENSG00000229353 (1)
ENSG00000247315 (1)

CHEBI ID

CHEBI:17126 (3)
CHEBI:17148 (3)
CHEBI:18186 (3)
CHEBI:25017 (3)
CHEBI:27897 (3)
CHEBI:28044 (3)
CHEBI:131739 (2)
CHEBI:131740 (2)
CHEBI:15366 (2)
CHEBI:15428 (2)
CHEBI:15741 (2)
CHEBI:15756 (2)
CHEBI:16610 (2)
CHEBI:16750 (2)
CHEBI:16811 (2)
CHEBI:16865 (2)
CHEBI:16870 (2)
CHEBI:16958 (2)
CHEBI:17154 (2)
CHEBI:17497 (2)
CHEBI:18012 (2)
CHEBI:18237 (2)
CHEBI:18257 (2)
CHEBI:19475 (2)
CHEBI:24898 (2)
CHEBI:26271 (2)
CHEBI:27266 (2)
CHEBI:27432 (2)
CHEBI:27570 (2)
CHEBI:28300 (2)

Metabolite Name

Aspartate (2)
Beta-Alanine (2)
Citrate (2)
Fumarate (2)
Glutamate (2)
Glutamine (2)
Glycine (2)
L-Alanine (2)
Malate (2)
Methionine (2)
Norvaline (2)
Ornithine (2)
Putrescine (2)
Tyrosine (2)
1,3-diaminopropane (1)
1-Aminocyclopropane-1-carboxylate I (1)
1-Aminocyclopropane-1-carboxylic acid II (1)
1-Linoleoylglycerol (1)
1-Lysophosphatidic acid(16:0) (1)
1-Lysophosphatidylcholine(14:0) (1)
1-Lysophosphatidylcholine(16:0) (1)
1-Lysophosphatidylcholine(18:1) (1)
1-Lysophosphatidylcholine(18:2) (1)
1-Lysophosphatidylcholine(18:3) (1)
1-Lysophosphatidylethanolamine(16:0) (1)
1-Lysophosphatidylethanolamine(18:0) (1)
1-Lysophosphatidylethanolamine(18:2) (1)
1-O-Feruloyl-beta-D-glucose I (1)
1-O-Feruloyl-beta-D-glucose II (1)
1-O-Sinapoyl-beta-D-glucose (1)

First Public Date

2026 (4)
2025 (2)
2014 (2)
2023 (1)

Modification

N6 (2)
N6-dimethyl-L-lysine (2)

Study type

Transcription profiling by array (126)
RNA-seq of coding RNA (18)
Unknown experiment type (13)
ChIP-seq (8)
ChIP-chip by tiling array (7)
Comparative genomic hybridization by array (7)
Other (5)
ChIP-chip by array (4)
Methylation profiling by array (3)
RNA-seq of non coding RNA (3)
Transcription profiling by SAGE (2)
DNA-seq (2)
Methylation profiling by high throughput sequencing (2)
Cell line - High-throughput sequencing (1)
Transcription profiling by RT-PCR (1)
Single nucleus RNA sequencing (1)
MicroRNA profiling by array (1)
Proteomic profiling by array (1)
RNA-seq of coding RNA from single cells (1)
RNA-seq of total RNA (1)

Release Date

2022 (146)
2023 (140)
2024 (131)
2021 (129)
2025 (125)
2020 (113)
2019 (98)
2017 (92)
2018 (90)
2015 (79)
2016 (73)
2012 (62)
2014 (61)
2013 (60)
2010 (54)
2011 (43)
2008 (31)
2009 (23)
2026 (18)
2007 (18)
2006 (9)
2004 (7)
2005 (6)
2002 (4)
2003 (4)
2000 (1)
1998 (1)

Lab affiliation

The University of Melbourne (5)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute of Biomedical Research (4)
Functional Proteomics, ICR (2)
The Chinese University of Hong Kong (2)
1Nutrient Metabolism & Signalling Laboratory, Metabolism, Diabetes and Obesity Program, Biomedicine Discovery Institute, Monash University, Victoria 3800, Australia. 2Department of Biochemistry and Molecular Biology, School of Biomedical Sciences, Faculty of Medicine, Nursing & Health Sciences, Monash University, Victoria 3800, Australia. (1)
Associate Professor, Department of Biology, Massachusetts Institute of Technology Whitehead Institute of Biomedical Research (1)
Associate Professor, Department of Biology, Massachusetts Institute of Technology and Whitehead Institute of Biomedical Research (lab head) (1)
Calico Life Sciences, CA, USA (1)
Centre of New Technologies, University of Warsaw, S. Banacha 2c, 02-097 Warsaw, Poland (1)
Chan Zuckerberg Biohub (1)
Chan Zuckerberg Biohub San Francisco (1)
Consultant Cardiologist in Inherited Cardiac Conditions Ã¢â‚¬â€œ Royal Free London Senior Clinical Lecturer Ã¢â‚¬â€œ UCL MRC LHA @UCL 1-19 Torrington Place London UK WC1E 7HB (1)
Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver BC, Canada (1)
Department of Biochemistry, Albert Einstein College of Medicine (1)
Department of Cell Biology Harvard Medical School Boston, MA USA (1)
Department of Clinical Pharmacy Practice, University of California, Irvine 92697, USA (1)
Department of Genetics, Stanford University (1)
Department of Medical Biotechnology and Laboratory Science College of Medicine, Chang Gung University, Taoyuan, Taiwan (1)
Department of Medicine, University of California San Francisco, USA (1)
Drug Discovery Moffitt Cancer Center Tampa, FL, USA (1)
General and molecular microbiology, Institute for chemistry and biology of the marine environment (ICBM), Carl von Ossietzky University of Oldenburg, Oldenburg, Germany (1)
Harvard School of Public Health (1)
Ichan School of Medicine at Mount Sinai (1)
Laboratory of Cellular and Structural Biology (1)
Max Perutz Labs, Vienna BioCenter Campus (VBC), 1030 Vienna, Austria Medical University of Vienna, Center for Medical Biochemistry, 1030 Vienna, Austria (1)
Molecular Pharmacology Program, Sloan Kettering Institute, Memorial Sloan Kettering Cancer Center, New York, NY, USA (1)
Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China (1)
Sir Peter MacCallum Department of Oncology, University of Melbourne, Australia; Peter MacCallum Cancer Centre, Melbourne, Australia (1)
Sunnybrook Research Institute, Toronto, ON, Canada / Department of Biochemistry, University of Toronto, Toronto, ON, Canada / Department of Biochemistry and Molecular Biology, Alberta Children’s Hospital Research Institute, Hotchkiss Brain Institute, University of Calgary, Calgary, AB, Canada / Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, ON, Canada (1)
The Institute of Cancer Research, London (1)

1770 Results

Show results for

Organisms

Organisms

Repository

Tissue

Disease

Technology Type

Instrument Platform

Publication Date

UNIPROT ID/AC

ENSEMBL ID

CHEBI ID

Metabolite Name

First Public Date

Modification

Study type

Release Date

Lab affiliation

Tags

OmicsDI is part of the ELIXIR infrastructure

Tweets