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TranscriptomicsDSB formation in replication compromised cells
DSBs were mapped genome-wide by ssDNA enrichment in cdc6-mn replication comprimsied strains. We mapped DSB sites by detecting DSB-associated ssDNA enrichment on microarrays. To test the role of DNA replication in DSB formation, we mapped ssDNA in a cdc6-mn replication depleted strain. ssDNA was isol...
ORGANISM(S): Saccharomyces cerevisiae 
2012-06-18 | E-GEOD-35666 | biostudies-arrayexpress
TranscriptomicsSeparation of DNA replication from the assembly of break-competent meiotic chromosomes
The meiotic cell division reduces the chromosome number from diploid to haploid to form gametes for sexual reproduction. Although much progress has been made in understanding meiotic recombination and the two meiotic divisions, the processes leading up to recombination, including the prolonged pre-m...
ORGANISM(S): Saccharomyces cerevisiae 
2012-06-14 | E-GEOD-35667 | biostudies-arrayexpress
TranscriptomicsHydro-tRNAseq of human cell lines HACAT and HepG2
To quantify tRNA expression, we perform hydro-tRNA sequencing (Gogakos et al. 2017) in HACAT (keratinoytes) and HepG2 (liver) human cell lines. This study contains 6 samples. Three replicates for each of the five cell lines. This data complements our previously published data (GEO: GSE137834), whic...
ORGANISM(S): Homo sapiens 
2021-03-15 | E-MTAB-9905 | biostudies-arrayexpress
GenomicsA fully validated blood stem/progenitor cell regulatory network reveals mechanisms of cell state stabilisation
The aim of this study was to determine the genomic binding sites of important haematopoietic transcription factors in haematopoietic cell lines. 416Bs cells were fixed with either 1 or 0.4 % formaldehyde for 10 mins. Chromatin was isolated, sonicated for 7 mins (30 sec on, 30 sec off), and specific ...
ORGANISM(S): Mus musculus 
2016-03-17 | E-GEOD-69776 | biostudies-arrayexpress
UnknownViews and Experiences of Travelers from US States to Zika-Affected Areas.
Not available
S-EPMC11308926 | biostudies-literature
UnknownAn experimentally validated network of nine haematopoietic transcription factors reveals mechanisms of cell state stability.
Not available
S-EPMC4798972 | biostudies-literature
UnknownThe Association Of A Sweetened Beverage Tax With Changes In Beverage Prices And Purchases At Independent Stores.
Not available
S-EPMC12265839 | biostudies-literature
UnknownThe costs and benefits of primary prevention of zoonotic pandemics.
Not available
S-EPMC8816336 | biostudies-literature
UnknownPrecision stratification of prognostic risk factors associated with outcomes in gestational diabetes mellitus: a systematic review.
Not available
S-EPMC10786838 | biostudies-literature
ProteomicsTime-Dependent Proteome Study: Human ovarian cancer tumor samples (0, 5, 30, 60 min)

The objective of the Time-Dependent Proteome Study, was to evaluate changes in the proteome and phosphoproteome when there is a delay in freezing tissues following sample (tumor) excision. The biospecimens used are from patient-derived ovarian cancer tumors.

ORGANISM(S): Homo Sapiens (ncbitaxon:9606) 
2018-11-05 | MSV000083107 | MassIVE
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