Chan Mark M - OmicsDI

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Unknown (120)
Genomics (17)
Transcriptomics (14)
Proteomics (10)
Models (2)
Genomic (1)
Metabolomics (1)

Organisms

Homo sapiens (31)
Mus musculus (9)
Arabidopsis thaliana (1)
Saccharomyces cerevisiae (1)

Repository

EGA (17)
biostudies-arrayexpress (14)
pride (9)
BioModels (2)
dbGaP (1)
MassIVE (1)
MetaboLights (1)

Tissue

B cell (5)
Cell culture (4)
Bone marrow (3)
Brain (1)
Permanent cell line cell (1)

Disease

Acute leukemia (6)
Lymphoma (2)
Lung adenocarcinoma (1)
Brain glioblastoma multiforme (1)
Colon cancer (1)
Lung carcinoma (1)

Technology Type

Mass Spectrometry (9)
Affinity purification coupled with mass spectrometry proteomics (7)
Shotgun proteomics (2)
Illumina HiSeq 2500 (ILLUMINA), AB SOLiD System (ABI_SOLID) (1)
Illumina HiSeq 2500, ILLUMINA (1)
Mass spectrometry (1)

Instrument Platform

Illumina HiSeq 2500 (1)
Liquid Chromatography MS - negative - reverse phase (1)
Liquid Chromatography MS - positive - reverse phase (1)

Publication Date

2025 (4)
2023 (3)
2014 (3)
2011 (3)
2020 (3)
2024 (2)
2013 (2)
2007 (2)
2022 (1)
2016 (1)
2012 (1)
2009 (1)
2004 (1)

CHEBI ID

CHEBI:131427 (1)
CHEBI:131924 (1)
CHEBI:131977 (1)
CHEBI:132032 (1)
CHEBI:132033 (1)
CHEBI:132037 (1)
CHEBI:134113 (1)
CHEBI:134548 (1)
CHEBI:134603 (1)
CHEBI:137334 (1)
CHEBI:137569 (1)
CHEBI:137570 (1)
CHEBI:138352 (1)
CHEBI:140418 (1)
CHEBI:140899 (1)
CHEBI:141288 (1)
CHEBI:141290 (1)
CHEBI:141293 (1)
CHEBI:142699 (1)
CHEBI:142701 (1)
CHEBI:144339 (1)
CHEBI:145970 (1)
CHEBI:15756 (1)
CHEBI:15843 (1)
CHEBI:16113 (1)
CHEBI:16196 (1)
CHEBI:167006 (1)
CHEBI:167581 (1)
CHEBI:168544 (1)
CHEBI:170247 (1)

Metabolite Name

1_CUDA iSTD (1)
1_Ceramide d18:1/17:0; iSTD (1)
1_FA 16:0-d3; iSTD (1)
1_LPC 17:0; iSTD (1)
1_MAG 17:0/0:0/0:0; iSTD (1)
Ceramide d32:1; (1)
Ceramide d34:0; (1)
Ceramide d34:1; (1)
Ceramide d36:1; (1)
Ceramide d38:1; (1)
Ceramide d40:0; (1)
Ceramide d40:1; (1)
Ceramide d42:0; (1)
Ceramide d42:1; (1)
Ceramide d42:2; A (1)
Ceramide d42:2; B (1)
Ceramide d43:1; (1)
Ceramide d44:1; (1)
FA 10:0; (capric acid) (1)
FA 11:0; (undecylic acid) (1)
FA 12:0; (lauric acid) (1)
FA 13:0; (tridecylic acid) (1)
FA 14:0; (myristic acid) (1)
FA 14:1; (physeteric acid) (1)
FA 15:0; (pentadecylic acid) (1)
FA 16:0; (palmitic acid) (1)
FA 16:1; (palmitoleic acid) (1)
FA 17:0; (margaric acid) (1)
FA 18:1; (oleic acid) (1)
FA 18:2; (linoleic acid) (1)

IsPrivate

False (2)

Submitter Keywords

Machine Learning Model (2)
FAIR-AIML (1)

Modelling Approach

Computational model (1)
Random forest procedure (1)

Modification

N6 (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (7)
Comparative genomic hybridization by array (2)
Transcription profiling by SAGE (1)
Genotyping by array (1)
MicroRNA profiling by high throughput sequencing (1)
Methylation profiling by array (1)
RNA-seq of coding RNA (1)

Release Date

2024 (19)
2025 (16)
2023 (15)
2020 (15)
2022 (13)
2021 (11)
2018 (6)
2011 (5)
2019 (5)
2016 (4)
2014 (4)
2017 (4)
2012 (3)
2015 (3)
2013 (2)
2009 (2)
2007 (2)
2026 (2)
2004 (1)
2008 (1)
2006 (1)

Lab affiliation

Center of Molecular and Cellular Oncology, Yale University (4)
Department of Oncology, Cumming School of Medicine, University of Calgary, Calgary, Alberta, Canada (1)
Department of Systems Biology, City of Hope Comprehensive Cancer Center, CA, USA (1)
Department of Systems Biology, City of Hope Comprehensive Cancer Center, Monrovia, CA, USA (1)
Shenzhen Key Laboratory of Synthetic Genomics, Guangdong Provincial Key Laboratory of Synthetic Genomics, CAS Key Laboratory of Quantitative Engineering Biology, Shenzhen Institute of Synthetic Biology, Shenzhen Institutes of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China (1)
The Francis Crick Institute, 1 Midland Road, London, NW1 1AT, UK (1)

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Lgr5 and Col22a1 Mark Progenitor Cells in the Lineage toward Juvenile Articular Chondrocytes.

Not available

S-EPMC6829785 | biostudies-literature

Transcription profiling of mouse vehicle and sAPPalpha-treated hippocampal slice cultures

Gene expression changes induced by alpha-secretase cleaved amyloid precursor protein (sAPPalpha) in organotypic hippocampal slice cultures of male, postnatal day 15 mice (C57B6/SJL). Hippocampal slice cultures were treated with phosphate buffered saline (GSM26700, GSM26701, GSM26702) or 1 nM sAPPal...

ORGANISM(S): Mus musculus

2007-10-10 | E-GEOD-1555 | biostudies-arrayexpress

Controlling CRISPR-Cas9 with ligand-activated and ligand-deactivated sgRNAs.

Not available

S-EPMC6509140 | biostudies-literature

Metamorphosis in balanomorphan, pedunculated, and parasitic barnacles: a video-based analysis.

Not available

S-EPMC3417160 | biostudies-literature

SARS-CoV-2 viremia is associated with distinct proteomic pathways and predicts COVID-19 outcomes.

Not available

S-EPMC8245177 | biostudies-literature

Histone variant H3.3 provides the heterochromatic H3 lysine 9 tri-methylation mark at telomeres.

Not available

S-EPMC4666390 | biostudies-literature

Impact of a Primary Care CKD Registry in a US Public Safety-Net Health Care Delivery System: A Pragmatic Randomized Trial.

Not available

S-EPMC6057801 | biostudies-literature

THE LONGEVITY ASSOCIATED ALLELE OF FOXO3 PROTECTS AGAINST TELOMERE ATTRITION DURING AGING

Not available

S-EPMC6845095 | biostudies-literature

Human embryonic stem cells

Undifferentiated human embryonic stem cells grown on mouse embryonic fibroblast feeder layers. HES3 and HES4 are proprietary human ES cell lines of ES Cell International Pte Ltd. Singapore. Keywords: other

ORGANISM(S): Homo sapiens

2004-01-18 | E-GEOD-608 | biostudies-arrayexpress

P21-positive senescent stromal cells promote prostate cancer immune suppression and progression that can be reversed by senolytic therapy.

Not available

S-EPMC12592801 | biostudies-literature

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165 Results

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