Chang Y Y - OmicsDI

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Unknown (14797)
Proteomics (331)
Transcriptomics (311)
Genomics (89)
Metabolomics (32)
Multiomics (8)
Models (1)

Organisms

Homo sapiens (211)
Mus musculus (94)
Drosophila melanogaster (13)
Arabidopsis thaliana (12)
Picea glauca (10)
Corynebacterium glutamicum (9)
Glycine max (8)
Saccharomyces cerevisiae (7)
Escherichia coli (6)
Tetrahymena thermophila (4)
Populus euphratica (4)
Rattus norvegicus (4)
Chlamydomonas reinhardtii (3)
Populus nigra (3)
Corynebacterium glutamicum ATCC 13032 (3)
Bradyrhizobium diazoefficiens USDA 110 (2)
Picea abies (2)
Vitis vinifera (2)
Solanum tuberosum (2)
Geranium dissectum (1)
Trichinella spiralis (1)
Populus simonii (1)
Populus alba (1)
Picea sitchensis (1)
Aspergillus flavus (1)
Mustela putorius furo (1)
Pinus pinaster (1)
Euphorbia esula (1)
Populus x canadensis (1)
Bemisia tabaci (1)

Organisms

Homo sapiens (19)
Mus musculus (6)
Drosophila melanogaster (2)
Camellia leyensis (1)
Camellia delicata (1)
Camellia longistyla (1)
Camellia mairei var. lapidea (1)
Oxytropis neimonggolica (1)
gut metagenome (1)

Repository

biostudies-arrayexpress (318)
pride (189)
iProX (114)
ENA (41)
EGA (39)
MetaboLights (32)
MassIVE (17)
jPOST (7)
PeptideAtlas (3)
geo (2)
BioModels (1)
PanoramaPublic (1)

Tissue

Cell culture (48)
Epithelial cell (19)
Brain (13)
Liver (11)
Permanent cell line cell (8)
Lung (7)
Blood plasma (6)
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Leaf (6)
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Cell suspension culture (5)
Colon (5)
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Stem cell (4)
HeLa cell (4)
Whole body (4)
Blood cell (4)
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Tear (3)
Urine (3)
Lymph node (3)
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Plant cell (3)
Macrophage (3)
Heart (3)
Fibroblast (3)
Kidney (3)
Blood (3)
Culture fluid (2)

Disease

Disease free (10)
Breast cancer (6)
Acute leukemia (6)
Osteosarcoma (5)
Non-small cell lung carcinoma (4)
Cervix carcinoma (2)
Influenza (2)
Alzheimer's disease (2)
Malignant neoplasm of ovary (2)
Carcinoma (1)
Uveitis (1)
Tauopathy (1)
Fungal infectious disease (1)
Oral cavity cancer (1)
Parasitic infectious disease (1)
Ovarian cancer (1)
Insulinoma (1)
Gastroenteritis (1)
Rectum cancer (1)
Diabetic retinopathy (1)
Bacterial infectious disease (1)
Parasitic helminthiasis infectious disease (1)
Lung small cell carcinoma (1)
Esophageal cancer (1)
Alopecia (1)
Ovary epithelial cancer (1)
Lung carcinoma (1)
IgA glomerulonephritis (1)
Severe acute respiratory syndrome (1)
Brain glioblastoma multiforme (1)

Technology Type

Mass Spectrometry (189)
Shotgun proteomics (87)
Bottom-up proteomics (47)
Mass spectrometry (31)
Data-dependent acquisition (25)
Gel-based experiment (14)
Affinity purification coupled with mass spectrometry proteomics (14)
SWATH MS (10)
Data-independent acquisition (6)
Top-down proteomics (6)
Chemical cross-linking coupled with mass spectrometry proteomics (4)
Proteogenomics (3)
SRM/MRM (3)
CAPILLARY, AB 3730xL Genetic Analyzer (1)
Illumina HiSeq 2000, Affymetrix SNP 6.0 (1)
AB SOLiD 4 System, Illumina HiSeq 2500, Illumina HiSeq 2000, AB SOLiD System 3.0 (1)
AB SOLiD System 3.0 (1)
AB SOLiD 4 System (1)
Illumina HiSeq 2000 (1)
NMR spectroscopy (1)
Glycoproteomics (1)
RNA mass spectrometry (1)
Affinity proteomics (1)
Immunopeptidomics (1)
MSE (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (14)
Liquid Chromatography MS - negative - reverse phase (12)
Illumina HiSeq 2000 (4)
Liquid Chromatography MS - positive - hilic (4)
Illumina HiSeq 2500 (3)
Illumina NovaSeq 6000 (3)
MS:1000031 (3)
Q Exactive HF-X (3)
Q Exactive (3)
Liquid Chromatography MS - alternating - reverse phase (3)
Liquid Chromatography MS - negative - hilic (3)
Illumina HiSeq 3000 (2)
NextSeq 500 (2)
LTQ Orbitrap Velos (2)
Orbitrap Exploris 480 (2)
Orbitrap Fusion Lumos (2)
5975C Series GC/MSD (Agilent) (2)
Liquid Chromatography MS - negative (2)
FACS (1)
ScanArrayExpress (1)
Trimmomatic 0.32; Bowtie 2.2.3 (1)
ScanArray 5000 [PerkinElmer] (1)
Illumina MiSeq (1)
Illumina HiSeq 4000 (1)
LTQ XL ETD (1)
Orbitrap Fusion ETD (1)
LTQ (1)
TripleTOF 6600 (1)
Orbitrap Fusion (1)
Q Exactive HF (1)

Publication Date

2010 (86)
2022 (55)
2023 (48)
2014 (44)
2025 (41)
2021 (39)
2011 (34)
2013 (32)
2020 (30)
2024 (30)
2026 (28)
2012 (28)
2016 (25)
2019 (24)
2015 (22)
2008 (21)
2018 (15)
2005 (11)
2006 (10)
2009 (8)
2017 (5)
2007 (5)
2004 (2)

UNIPROT ID/AC

Q6ZVE7 (3)
Q99619 (3)
Q8N4U5 (3)
Q9UBZ4 (3)
Q96QP1 (3)
Q9Y576 (3)
Q6ZTQ3 (3)
Q9H633 (3)
Q96PC5-2 (3)
Q96PC5 (3)
Q8TDW5 (3)
Q9NXZ2 (3)
Q8IZP6 (3)
Q9UHA2 (3)
Q6MZQ0 (3)
Q9C019 (3)
Q96EP1 (3)
Q8IYM2 (3)
Q86SJ2 (3)
Q02833 (3)
O43194 (3)
Q9Y2C3 (3)
O00338 (3)
Q6NSJ2 (3)
Q17R98 (3)
Q9Y664 (3)
Q9UNP4 (3)
Q96BZ9 (3)
Q8WUA8 (3)
Q3MII6 (3)

ENSEMBL ID

ENSG00000247315 (3)
ENSG00000147251 (3)
ENSG00000170477 (3)

CHEBI ID

CHEBI:16708 (15)
CHEBI:17568 (15)
CHEBI:30769 (15)
CHEBI:15741 (14)
CHEBI:17596 (14)
CHEBI:16335 (13)
CHEBI:7916 (13)
CHEBI:32816 (13)
CHEBI:17822 (12)
CHEBI:16449 (12)
CHEBI:16704 (12)
CHEBI:30915 (12)
CHEBI:16737 (12)
CHEBI:17368 (12)
CHEBI:26271 (11)
CHEBI:6650 (11)
CHEBI:27468 (11)
CHEBI:17750 (11)
CHEBI:15354 (11)
CHEBI:15756 (11)
CHEBI:30805 (10)
CHEBI:16040 (10)
CHEBI:16750 (10)
CHEBI:25017 (10)
CHEBI:15428 (10)
CHEBI:30746 (10)
CHEBI:17821 (10)
CHEBI:17154 (10)
CHEBI:16865 (10)
CHEBI:27823 (10)

Metabolite Name

Uracil (8)
Adenosine (8)
Adenine (7)
Inosine (7)
Hypoxanthine (7)
Creatinine (6)
Glycine (6)
Quercetin (5)
Adenine (5)
Alanine (5)
Succinic acid (5)
Betaine (5)
Kynurenic acid (5)
Ornithine (5)
Pantothenic acid (5)
Choline (5)
Citric acid (5)
Itaconic acid (5)
Spermidine (5)
Azelaic acid (5)
Cytidine (5)
Uridine (5)
Creatinine (5)
2'-deoxycytidine (4)
L-Saccharopine (4)
Leucine (4)
Serine (4)
Proline (4)
Hypoxanthine (4)
Cysteine (4)

First Public Date

2022 (9)
2016 (5)
2025 (4)
2024 (4)
2021 (4)
2020 (4)
2018 (4)
2019 (3)
2014 (3)
2017 (1)

Lab affiliation

Department of Structural Biology and Developmental Neurobiology, Center for Proteomics and Metabolomics, St. Jude Children's Research Hospital, Memphis, TN 38105, USA (3)
Beijing proteome research center (3)
Genomics Research Center, Academia Sinica, Taipei, 11529 Taiwan (3)
Boston University Medical Campus 670 Albany St., Rm. 509 Boston, MA 02118 USA (2)
Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA. (2)
Ping Xu, Ph.D. Secretary General of CNHUPO Professor, Director Department of Genomics and Proteomics, State Key Laboratory of Proteomics, Beijing Proteome Research Center, National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics， 38 Life Science Park Road, Beijing 102206, P.R. China. Tel: 0086-10-61777113, Fax: 0086-10-61777060 (2)
Stanford School of Medicine (2)
Sichuan university (2)
Vetsuisse Faculty (VET), Department of Molecular Mechanisms of Disease, University of Zurich (UZH) (2)
Peking Union Medical College (2)
Institute of Bioinformatics, Bangalore, Karnataka, India (2)
Chair of Proteomics and Bioanalytics, Technical University of Munich (2)
School of Life Sciences, Peking University, Beijing 100871, P.R. China (1)
Department of Rheumatology and immunology, Second Xiangya Hospital of South Central University, No.139 Ren Min Department of Rheumatology and immunology, Second Xiangya Hospital of South Central University, No.139 Ren Min Middle Road, Chang Sha,China41001111111rtment of Rheumatology and immunology, Second Xiangya Hospital of South Central University, No.139 Ren Min Mid6969Chang Sha,China410011d, Chang Sha,China410011 (1)
Department of obstetrics and gynecology. Second affiliated hospital of Harbin Medical University. Harbin, Heilongjiang, China. (1)
Wellcome Centre for Cell-Matrix Research, Division of Molecular and Cellular Function, University of Manchester, UK (1)
National Key Laboratory of Wheat and Maize Crop Science, Collaborative Innovation Center of Henan Grain Crops, College of Agronomy, Henan Agricultural University, China (1)
National Key Discipline Laboratory, Department of Nutrition and Food Hygiene, School of Public Health, Harbin Medical University, Harbin, P. R. China (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
National Key Laboratory of Crop Genetic Improvement, Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan 430070, China (1)
1.Department of Pharmaceutics, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China 2.State Key Laboratory of Natural and Biomimetic Drugs, Beijing 100191, China 3.Beijing Key Laboratory of Molecular Pharmaceutics and New Drug Delivery Systems, School of Pharmaceutical Sciences, Peking University, Beijing 100191, China (1)
Pfizer, INC. (1)
State Key Laboratory of Proteomics; Beijing Proteome Research Center; National Center for Protein Sciences (Beijing) Beijing Institute of Lifeomics; China (1)
Department of Cellular and Molecular Pharmacology, University of California San Francisco, USA (1)
Max Planck Institute of Biophysics, Frankfurt am Main, Germany (1)
Institute (1)
Cancer Science Institute, National University of Singapore, Singapore (1)
State Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan 430079, China (1)
Doctor at Tongji Hospital, Huazhong University of Science and Technology, Wuhan, China (1)
Department of Chemistry, Sun's Lab, Michigan State University, USA (1)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Modification

1x(15)N labeled L-leucine (1)

Study type

Transcription profiling by array (180)
Unknown experiment type (51)
RNA-seq of coding RNA (32)
ATAC-seq (8)
ChIP-chip by tiling array (7)
RNA-seq of non coding RNA (7)
Methylation profiling by array (6)
Comparative genomic hybridization by array (4)
Other (4)
ChIP-seq (4)
ChIP-chip by array (3)
DNA-seq (3)
CLIP-Seq (2)
Methylation profiling by high throughput sequencing (2)
Cell line - High-throughput sequencing (1)
Genotyping by array (1)
Spatial transcriptomics by high-throughput sequencing (1)
Single nucleus RNA sequencing (1)
RNA-seq of total RNA (1)

Release Date

2025 (2113)
2022 (1860)
2023 (1777)
2024 (1594)
2021 (1458)
2020 (1115)
2019 (891)
2018 (754)
2016 (621)
2017 (600)
2015 (529)
2014 (387)
2026 (289)
2013 (269)
2012 (218)
2011 (184)
2010 (169)
2009 (97)
2008 (68)
2007 (37)
2006 (26)
2005 (23)
2004 (15)
2002 (5)
2001 (4)
1997 (3)
2003 (2)
2000 (2)
1998 (2)
1999 (1)

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Interaction between Chromodomain Y-like Protein and Androgen Receptor Signaling in Sertoli Cells Accounts for Spermatogenesis.

Not available

S-EPMC11120535 | biostudies-literature

Camellia delicata isolate:Camellia delicata Y. K. Li

Camellia delicata isolate:Camellia delicata Y. K. Li Genome sequencing

PRJNA399245 | ENA

Transcription profiling of Drosophila LD/DD time series of y w tim01, cn bw, and y w

This SuperSeries is composed of the following subset Series:; GSE3826: LD/DD time course of y w Drosophila #1; GSE3828: LD/DD time course of y w Drosophila #2; GSE3829: LD/DD time course of cn bw Drosophila; GSE3830: LD/DD time course of y w Drosophila #3; GSE3831: LD/DD time course of y w; tim01 Dr...

ORGANISM(S): Drosophila melanogaster

2008-06-12 | E-GEOD-3842 | biostudies-arrayexpress

SNP detection and population structure evaluation of Salix gordejevii Y. L. Chang et Skv. in Hunshandake Sandland, Inner Mongolia, China.

Not available

S-EPMC8140056 | biostudies-literature

Transcription profiling of Drosophila y w during LD/DD time series #1

Mechanisms composing Drosophila's clock are conserved within the animal kingdom. To learn how such clocks influence behavioral and physiological rhythms, we determined the complement of circadian transcripts in adult Drosophila heads. High-density oligonucleotide arrays were used to collect data in ...

ORGANISM(S): Drosophila melanogaster

2008-06-12 | E-GEOD-3826 | biostudies-arrayexpress

Excellent physicochemical and sensing characteristics of a Re _x O _y based pH sensor at low post-deposition annealing temperature.

Not available

S-EPMC9074847 | biostudies-literature

Transcription profiling of Drosophila y w exposed to an LD/DD time series #2

ORGANISM(S): Drosophila melanogaster

2008-06-12 | E-GEOD-3828 | biostudies-arrayexpress

ZNF280BY and ZNF280AY: autosome derived Y-chromosome gene families in Bovidae.

Not available

S-EPMC3032696 | biostudies-literature

Structural variation on the short arm of the human Y chromosome: recurrent multigene deletions encompassing Amelogenin Y.