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TranscriptomicsEpigenetic Control of Light-Regulated Gene Expression in Arabidopsis
Although landscapes of several epigenetic marks are now available for Arabidopsis and rice, such profiles remain static and do not provide information about dynamic changes of plant epigenomes in response to developmental or environmental cues. Here we analyzed the effects of light regulation on fou...
ORGANISM(S): Arabidopsis thaliana 
2009-12-30 | E-GEOD-15597 | biostudies-arrayexpress
TranscriptomicsThe photoreceptor chaperone FHY1 has an independent role in gene modulation and plant development under far-red light [RNA-Seq]
To incorporate the far-red light (FR) signal into a strategy for optimizing plant growth, FAR-RED ELONGATED HYPOCOTYL1 (FHY1) mediates the nuclear translocation of the FR photoreceptor phytochrome A (phyA) and facilitates the association of phyA with the promoters of numerous associated genes crucia...
ORGANISM(S): Arabidopsis thaliana 
2014-08-04 | E-GEOD-58082 | biostudies-arrayexpress
GenomicsThe photoreceptor chaperone FHY1 has an independent role in gene modulation and plant development under far-red light [ChIP-seq]
To incorporate the far-red light (FR) signal into a strategy for optimizing plant growth, FAR-RED ELONGATED HYPOCOTYL1 (FHY1) mediates the nuclear translocation of the FR photoreceptor phytochrome A (phyA) and facilitates the association of phyA with the promoters of numerous associated genes crucia...
ORGANISM(S): Arabidopsis thaliana 
2014-08-04 | E-GEOD-58083 | biostudies-arrayexpress
GenomicsArabidopsis phytochrome A directly targets numerous promoters for individualized modulation of genes in wide range of pathways [ChIP-seq]
The far-red light (FR) photoreceptor phytochrome A (phyA) contains no DNA binding domain but associates with CHS promoter through its chaperon FHY1 and transcription factors to regulate transcription. Here, we performed a genome-wide identification of phyA targets using a combination of phyA ChIP- a...
ORGANISM(S): Arabidopsis thaliana 
2014-05-06 | E-GEOD-48769 | biostudies-arrayexpress
TranscriptomicsArabidopsis phytochrome A directly targets numerous promoters for individualized modulation of genes in wide range of pathways [RNA-seq]
The far-red light (FR) photoreceptor phytochrome A (phyA) contains no DNA binding domain but associates with CHS promoter through its chaperon FHY1 and transcription factors to regulate transcription. Here, we performed a genome-wide identification of phyA targets using a combination of phyA ChIP- a...
ORGANISM(S): Arabidopsis thaliana 
2014-05-06 | E-GEOD-48767 | biostudies-arrayexpress
GenomicsArabidopsis phytochrome A directly targets numerous promoters for individualized modulation of genes in wide range of pathways
This SuperSeries is composed of the SubSeries listed below. Refer to individual Series
ORGANISM(S): Arabidopsis thaliana 
2014-05-06 | E-GEOD-48770 | biostudies-arrayexpress
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