Chen Q Q - OmicsDI

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Unknown (57815)
Proteomics (1837)
Transcriptomics (816)
Metabolomics (243)
Genomics (126)
Multiomics (10)
Genomic (2)
Other (2)

Organisms

Homo sapiens (1222)
Mus musculus (608)
Rattus norvegicus (105)
Arabidopsis thaliana (69)
Oryza sativa (50)
Saccharomyces cerevisiae (29)
Schizosaccharomyces pombe (27)
Drosophila melanogaster (26)
Gallus gallus (22)
Zea mays (18)
Caenorhabditis elegans (15)
Danio rerio (13)
Sus scrofa (9)
Bos taurus (9)
Rattus rattus (6)
Oryza sativa Japonica Group (5)
Folsomia candida (3)
Macaca mulatta (3)
Oryza sativa Indica Group (3)
Citrus sinensis (3)
Ovis aries (3)
Apostichopus japonicus (2)
Helicobacter pylori 26695 (2)
Schistosoma japonicum (2)
Vibrio parahaemolyticus (2)
Saccharomyces cerevisiae SK1 (2)
Bacteroides thetaiotaomicron (2)
Bifidobacterium longum (2)
Verticillium dahliae (2)
mouse gut metagenome (2)

Organisms

Arabidopsis thaliana (2)
groundwater metagenome (1)
Zea mays subsp. mays (1)
Danio rerio (1)
Homo sapiens (1)
Mus musculus (1)

Repository

pride (1336)
biostudies-arrayexpress (905)
iProX (372)
MetaboLights (226)
MassIVE (112)
EGA (26)
GNPS (17)
ENA (9)
jPOST (6)
PeptideAtlas (6)
geo (3)
LINCS (3)
dbGaP (2)
GPMDB (2)
NODE (2)
PAXDB (2)
PanoramaPublic (1)

Tissue

Cell culture (339)
Epithelial cell (98)
Leaf (63)
Brain (56)
Plant cell (56)
Liver (51)
Permanent cell line cell (41)
Heart (35)
Blood plasma (34)
Whole body (31)
Kidney (26)
Lung (26)
Testis (25)
Blood (22)
Blood serum (20)
Root (20)
Colon (17)
Embryonic stem cell (17)
Macrophage (17)
T cell (16)
B cell (15)
Hepatocyte (15)
Spleen (15)
Stem cell (15)
Cell suspension culture (14)
Oocyte (14)
Bone marrow (13)
Others (3)
Male Reproductive System (2)
Brain (1)

Disease

Disease free (44)
Breast cancer (34)
Colon cancer (21)
Cervix carcinoma (13)
Acute leukemia (12)
Prostate adenocarcinoma (11)
Type 2 diabetes mellitus (9)
Cardiovascular system disease (8)
Non-small cell lung carcinoma (8)
Lung cancer (6)
Melanoma (6)
Alzheimer's disease (5)
Influenza (5)
Malignant neoplasm of ovary (5)
Brain cancer (4)
Brain glioblastoma multiforme (4)
Not Available (2)
HPV positive (1)
Endometrioid carcinoma (1)
Ischemic (1)
Embryonic lethal at day 8.5 to 9.5 (1)
Infiltrating ductal carcinoma (1)
Dukes D primary colon cancer (1)
Colon cancer metastasis (1)
None- acute control (1)
Small cell lung carcinoma (1)
Megakaryoblastic leukemia (1)
Benign adenoma (1)
None- Acute Control (1)
Prostate cancer (1)

Technology Type

Mass Spectrometry (1336)
Shotgun proteomics (690)
Bottom-up proteomics (204)
Mass spectrometry (181)
Affinity purification coupled with mass spectrometry proteomics (131)
Data-dependent acquisition (117)
Gel-based experiment (105)
Data-independent acquisition (68)
Top-down proteomics (64)
Mass spectrometry assay (42)
SWATH MS (42)
Chemical cross-linking coupled with mass spectrometry proteomics (30)
SRM/MRM (18)
Proteogenomics (12)
Affinity proteomics (8)
All-ion fragmentation (8)
Mass spectrometry imaging (7)
DiaPASEF (4)
MSE (4)
RNA mass spectrometry (4)
Illumina HiSeq 2000 (3)
Chemiluminescence (3)
ELISA (3)
NMR spectroscopy (3)
Immunopeptidomics (2)
Olink affinity proteomics (2)
HDMSE (1)

Instrument Platform

Q Exactive (51)
Q Exactive Plus (23)
Illumina NovaSeq 6000 (16)
Illumina HiSeq 2500 (13)
Illumina HiSeq 2000 (10)
Illumina HiSeq 4000 (8)
Axon GenePix 4000B scanning hardware (6)
NextSeq 550 (4)
NextSeq 500 (4)
6520A Quadrupole Time-of-Flight LC/MS (3)
Windows 7 (2)
HiSeq X Ten (2)
Illumina MiSeq (2)
6470 Triple Quadrupole LC/MS (Agilent instrument model) (2)
6545XT Q-TOF LC\/MS (Agilent Instrument model) (2)
Dell T8310 (1)
Affymetrix Array scanner (1)
Affymetrix hybridization station (1)
Trimmomatic 0.32; Bowtie 2.2.3 (1)
BD Influx (1)
Illumina Genome Analyzer IIx (1)
G2565BA DNA microarray scanner [Agilent] (1)
GenePix 4000B [Axon Instruments] (1)
Illumina Genome Analyzer II (1)
Scanning hardware (1)
Illumina NovaSeq X (1)
Illumina HiSeq 1500 (1)
7820A/5977B GC/MS (Agilent instrument model) (1)
Agilent 1290 Infinity II HPLC system coupled to a qTOF 6550 ESI\/MS (1)
Agilent 1290 Infinity II LC System (Agilent Technologies) coupled with a qTOF 6550 mass detector (1)

Publication Date

2022 (318)
2025 (297)
2023 (296)
2024 (280)
2026 (234)
2021 (221)
2014 (134)
2020 (133)
2013 (131)
2015 (130)
2019 (119)
2016 (111)
2010 (102)
2012 (96)
2017 (83)
2018 (81)
2011 (59)
2005 (53)
2009 (28)
2008 (26)
2007 (22)
2006 (15)
2004 (12)
2003 (1)

UNIPROT ID/AC

14331_SOLTU (1)
14332_SOLTU (1)
14335_SOLTU (1)
4113.PGSC0003DMT400001418 (1)
4113.PGSC0003DMT400002078 (1)
4113.PGSC0003DMT400003947 (1)
4113.PGSC0003DMT400005135 (1)
4113.PGSC0003DMT400005136 (1)
4113.PGSC0003DMT400005427 (1)
4113.PGSC0003DMT400009647 (1)
4113.PGSC0003DMT400009751 (1)
4113.PGSC0003DMT400013958 (1)
4113.PGSC0003DMT400015957 (1)
4113.PGSC0003DMT400016201 (1)
4113.PGSC0003DMT400022438 (1)
4113.PGSC0003DMT400027147 (1)
4113.PGSC0003DMT400027379 (1)
4113.PGSC0003DMT400029003 (1)
4113.PGSC0003DMT400031900 (1)
4113.PGSC0003DMT400034164 (1)
4113.PGSC0003DMT400034190 (1)
4113.PGSC0003DMT400035006 (1)
4113.PGSC0003DMT400035007 (1)
4113.PGSC0003DMT400038109 (1)
4113.PGSC0003DMT400040121 (1)
4113.PGSC0003DMT400040171 (1)
4113.PGSC0003DMT400040182 (1)
4113.PGSC0003DMT400041662 (1)
4113.PGSC0003DMT400043254 (1)
4113.PGSC0003DMT400045338 (1)

ENSEMBL ID

ENSG00000170477 (6)
ENSG00000247315 (5)
ENSG00000147251 (4)
ENSG00000229353 (3)
ENSG00000214897 (2)
ENSG00000204131 (1)

CHEBI ID

CHEBI:17368 (68)
CHEBI:16704 (63)
CHEBI:16335 (62)
CHEBI:17596 (62)
CHEBI:30769 (58)
CHEBI:16750 (57)
CHEBI:17154 (56)
CHEBI:16708 (55)
CHEBI:16919 (55)
CHEBI:17568 (55)
CHEBI:15354 (51)
CHEBI:15891 (50)
CHEBI:16235 (50)
CHEBI:17895 (50)
CHEBI:17562 (48)
CHEBI:16027 (47)
CHEBI:16737 (47)
CHEBI:7916 (47)
CHEBI:15756 (45)
CHEBI:15741 (44)
CHEBI:17750 (44)
CHEBI:17295 (43)
CHEBI:17509 (43)
CHEBI:17748 (42)
CHEBI:27897 (42)
CHEBI:16015 (41)
CHEBI:17015 (41)
CHEBI:17533 (41)
CHEBI:30915 (41)
CHEBI:6650 (41)

Metabolite Name

Creatine (52)
Hypoxanthine (48)
Inosine (48)
Uridine (47)
Adenosine (45)
Adenine (43)
L-Tyrosine (42)
Uracil (42)
Guanine (39)
Guanosine (39)
Choline (35)
Creatinine (35)
L-Phenylalanine (35)
Taurine (35)
Cytidine (34)
L-Histidine (34)
Xanthine (34)
L-Arginine (33)
Riboflavin (33)
Indole (32)
Thymidine (32)
Thymine (32)
Xanthosine (32)
Betaine (31)
L-Tryptophan (31)
Uric acid (31)
Cytosine (30)
Spermidine (29)
L-Glutamine (28)
L-Valine (28)

First Public Date

2023 (4)
2021 (2)
2026 (1)
2024 (1)
2014 (1)

Modification

4-tetrahydrothiazine-3-carboxylic acid (2)
57.021464 (2)
N6 (2)
Not available (2)
15.994915 (1)
1x(15)N labeled L-leucine (1)
2x(15)N labeled L-lysine (1)
4x(15)N labeled L-arginine (1)
6-dioxaoctanediamine derivatized cysteine (1)
N6-dimethyl-L-lysine (1)

Study type

Transcription profiling by array (518)
RNA-seq of coding RNA (170)
ChIP-seq (67)
RNA-seq of non coding RNA (25)
Methylation profiling by high throughput sequencing (20)
Unknown experiment type (19)
Comparative genomic hybridization by array (15)
Methylation profiling by array (14)
Transcription profiling by RT-PCR (9)
Other (6)
ChIP-chip by tiling array (5)
ChIP-chip by array (4)
Genotyping by array (4)
DNA-seq (4)
RNA-seq of coding RNA from single cells (4)
Transcription profiling by SAGE (2)
Transcription profiling by tiling array (2)
ATAC-seq (2)
MicroRNA profiling by array (2)
Transcription profiling by high throughput sequencing (1)
Cell line - Single-cell sequencing (1)
Plant - High-throughput sequencing (1)
Translation profiling (1)
High-throughput sequencing (1)
Animal - High-throughput sequencing (1)
Cell line - High-throughput sequencing (1)
RNAi profiling by array (1)
4C (1)
Hi-C (1)
Ribo-seq (1)

Release Date

2025 (9278)
2022 (8157)
2024 (7461)
2023 (7435)
2021 (6098)
2020 (4431)
2019 (3092)
2018 (2578)
2017 (2148)
2016 (1746)
2026 (1383)
2015 (1319)
2014 (1031)
2013 (725)
2012 (528)
2011 (366)
2010 (333)
2009 (186)
2008 (129)
2005 (81)
2007 (75)
2006 (62)
2004 (33)
2002 (14)
2003 (13)
2000 (7)
2001 (4)
1999 (4)
1998 (3)

Lab affiliation

Zhejiang University (9)
Huazhong Agricultural University (5)
Institute of Biophysics, Chinese Academy of Sciences (5)
Peking University (5)
Shandong Normal University (5)
Shanghai Institute of Materia Medica, Chinese Academy of Sciences (5)
Tsinghua University, China (5)
University of Pennsylvania (5)
Alkali Soil Natural Environmental Science Center, Northeast Forestry University, Key Laboratory of Saline-alkali Vegetation Ecology Restoration in Oil Field, Ministry of Education, Harbin 150040, China (4)
Department of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX, USA. (4)
Department of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA 02215, USA., Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA (4)
Department of Cardiovascular Medicine, Center for Circadian Metabolism and Cardiovascular Disease, Southwest Hospital, Army Medical University; Chongqing, China. (4)
Guangzhou Medical University (4)
Institute of Plant Genetics, Leibniz Universitaet Hannover, Germany (4)
Laboratory of Microbiology Oceanography, State Key Laboratory of Microbial Metabolism, School of Life Sciences and Biotechnology, State Key Laboratory of Ocean Engineering, Shanghai Jiao Tong University, School of Oceanography, Shanghai JiaoTong University (4)
Shanghai Key Laboratory of Bioactive Small Molecules, Department of Physiology and Pathophysiology, School of Basic Medical Sciences, Fudan University Shanghai Medical College, Shanghai 200032, China. (4)
Staff Scientist Biological Systems & Engineering Division Lawrence Berkeley National Laboratory Berkeley CA 94720 (4)
State Key Laboratory of Reproductive Medicine, Nanjing Medical University (4)
Affiliation of Qiutao Xu: State Key Laboratory for Conservation and Utilization of Subtropical Agro-bioresources, College of Agriculture, Guangxi University, Nanning 530004, China (3)
Biological Science Research Center, Southwest University, Chongqing, 400715, China (3)
Clinical Laboratory of BGI Health, BGI-Shenzhen, Shenzhen 518083, China (3)
College of Chemistry and Molecular Engineering, Peking University, Beijing, China. (3)
Department for Plant Cell and Molecular Biology, Institute for Biology, Humboldt-Universität zu Berlin (3)
Department of Experimental Radiation Oncology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA (3)
Department of Immunobiology, College of Life Science and Technology, Jinan University, Guangzhou, China. (3)
Department of Immunology, College of Basic Medical Science, China Medical University, Shenyang, Liaoning 110122, China (3)
Faculty of Health Sciences, University of Macau, Macau, China (3)
Fudan University (3)
Jinan University (3)
Key Laboratory of Tropical Marine Bio-resources and Ecology,South China Sea Institute of Oceanology, Chinese Academy of Sciences (3)

60845 Results

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Organisms

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Disease

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ENSEMBL ID

CHEBI ID

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