Chiang Vincent L VL

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Transcriptomics (3)
Unknown (2)
Metabolomics (1)

Organisms

Populus trichocarpa (3)

Repository

biostudies-arrayexpress (3)
MetaboLights (1)

Technology Type

Mass spectrometry (1)

Instrument Platform

Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2014 (2)
2010 (1)
2022 (1)

CHEBI ID

CHEBI:1368 (1)
CHEBI:8185 (1)
CHEBI:167540 (1)
CHEBI:175931 (1)
CHEBI:132820 (1)
CHEBI:181036 (1)
CHEBI:75642 (1)
CHEBI:176884 (1)
CHEBI:49125 (1)
CHEBI:75098 (1)
CHEBI:175611 (1)
CHEBI:27522 (1)
CHEBI:132366 (1)
CHEBI:32491 (1)
CHEBI:80897 (1)
CHEBI:132821 (1)
CHEBI:114954 (1)
CHEBI:66287 (1)
CHEBI:27395 (1)
CHEBI:139424 (1)
CHEBI:69671 (1)
CHEBI:3461 (1)
CHEBI:134253 (1)
CHEBI:86904 (1)
CHEBI:175933 (1)
CHEBI:6373 (1)
CHEBI:64907 (1)
CHEBI:17527 (1)
CHEBI:75644 (1)
CHEBI:39 (1)

Metabolite Name

3,3',4-O-Trimethylellagic acid (1)
5,4'-Dihydroxy-3,6,7,3'-tetramethoxyflavone (1)
(-)-Epicatechin-3-(3''-O-methyl)gallate (1)
Physcion-8-O-glucoside (1)
1-O-Feruloyl-D-Glucose (1)
Juglone; 5-Hydroxy-1,4-naphthoquinone (1)
LysoPC 18:2 (2n isomer) (1)
Matairesinol-4'-O-glucoside (Matairesinoside) (1)
Arecatannin A1 (1)
1,2,3,6-Tetra-O-Galloyl-D-Glucose (1)
Chrysophanol-8-O-glucoside (1)
Cytidine 5'-monophosphate (Cytidylic acid) (1)
Scopoletin (7-Hydroxy-5-methoxycoumarin) (1)
3-Carbamyl-1-methylpyridinium (1-Methylnicotinamide) (1)
LysoPE 16:0 (2n isomer) (1)
LysoPC 18:0 (2n isomer) (1)
LysoPC 16:0 (2n isomer) (1)
Apigenin-7-O-glucoside (Cosmosiin) (1)
LysoPC 18:3 (2n isomer) (1)
LysoPE 18:1 (2n isomer) (1)
Avicularin (Quercetin-3-O-alpha-L-arabinofuranoside) (1)
D-Panose (1)
Betanin (Betanidin-5-O-glucoside) (1)
Kaempferol-3-O-robinoside-7-O-rhamnoside (Robinin) (1)
Fraxetin (7,8-Dihydroxy-6-methoxycoumarin) (1)
Sodium Valproate (1)
10-Heptadecenoic Acid (1)
2,5-Dihydroxybenzoic acid; Gentisic Acid (1)
Naringenin-7-O-Neohesperidoside (Naringin) (1)
Quercetin-3-O-rhamnoside (Quercitrin) (1)

Study type

RNA-seq of coding RNA (2)
Transcription profiling by array (1)

Release Date

2014 (2)
2010 (1)
2023 (1)
2022 (1)

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Stress-Responsive MicroRNAs in Populus

MicroRNAs (miRNAs), a group of small non-coding RNAs, have recently become a subject of intense study. They are a class of post-transcriptional, negative regulators playing vital roles in plant development and growth. However, little is known about their regulatory roles in treeâ€™s responses to the...

ORGANISM(S): Populus trichocarpa

2010-05-26 | E-GEOD-10582 | biostudies-arrayexpress

SND1 Transcription Factor-Directed Quantitative Functional Hierarchical Genetic Regulatory Network in Wood Formation in Populus trichocarpa

We focused on RNA-seq-based full transcriptome responses to PtrSND1-B1 overexpression at 7, 12, and 25 h in stem defferentiating xylem (SDX) protoplasts We transfected PtrSND1-B1 and sGFP into stem differentiating xylem protoplasts and performed RNA-seq to reveal the whole transcriptome.

ORGANISM(S): Populus trichocarpa

2014-04-01 | E-GEOD-49911 | biostudies-arrayexpress

The Manchurian Walnut Genome: Insights into Juglone and Lipid Biosynthesis

BACKGROUND: Manchurian walnut (Juglans mandshurica Maxim.) is a tree with multiple industrial uses and medicinal properties in the Juglandaceae family (walnuts and hickories). J. mandshurica produces juglone, which is a toxic allelopathic agent and has potential utilization value...

2022-05-18 | MTBLS3657 | MetaboLights

Ptr-miR397a is a negative regulator of laccase genes affecting lignin content in Populus trichocarpa

Laccases were proposed to catalyze the oxidative polymerization of monolignols. We identified 49 laccase gene models in Populus trichocarpa, of which 29 were predicted to be targets of ptr-miR397a. We overexpressed Ptr-MIR397a in transgenic P. trichocarpa. In each of all 9 transgenic lines tested, 1...

ORGANISM(S): Populus trichocarpa

2014-01-17 | E-GEOD-54153 | biostudies-arrayexpress

Cost-effectiveness of Aflibercept Monotherapy vs Bevacizumab First Followed by Aflibercept If Needed for Diabetic Macular Edema.

Not available

S-EPMC9896372 | biostudies-literature

Aflibercept Monotherapy or Bevacizumab First for Diabetic Macular Edema.

Not available

S-EPMC9714135 | biostudies-literature