Ching J J - OmicsDI

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Unknown (446)
Transcriptomics (61)
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Homo sapiens (107)
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Caenorhabditis elegans (1)
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biostudies-arrayexpress (61)
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pride (11)
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Disease

Raji Burkitt's lymphoma (1)
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Mass Spectrometry (11)
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Bottom-up proteomics (2)
AB 5500 Genetic Analyzer, Ion Torrent PGM (1)
Illumina HiSeq 1000, Ion Torrent PGM, Illumina Genome Analyzer IIx (1)
Illumina HiSeq 2500 (ILLUMINA), AB SOLiD System (ABI_SOLID) (1)
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Instrument Platform

Q Exactive Plus (7)
LTQ Orbitrap (2)
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TripleTOF 5600 (2)
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4000 QTRAP (1)
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QTRAP 6500 (Applied Biosystems) (1)
LTQ-Orbitrap (1)

Publication Date

2008 (19)
2010 (13)
2020 (7)
2013 (7)
2012 (6)
2007 (5)
2023 (5)
2015 (4)
2016 (3)
2014 (3)
2011 (3)
2022 (3)
2019 (3)
2017 (2)
2018 (2)
2024 (2)
2025 (2)
2002 (1)
2021 (1)
2026 (1)

CHEBI ID

CHEBI:15741 (3)
CHEBI:15756 (3)
CHEBI:16865 (3)
CHEBI:18012 (3)
CHEBI:30769 (3)
CHEBI:6650 (3)
CHEBI:14336 (2)
CHEBI:15428 (2)
CHEBI:15843 (2)
CHEBI:16015 (2)
CHEBI:16856 (2)
CHEBI:17196 (2)
CHEBI:17230 (2)
CHEBI:18183 (2)
CHEBI:27432 (2)
CHEBI:28757 (2)
CHEBI:28842 (2)
CHEBI:30915 (2)
CHEBI:32805 (2)
CHEBI:33508 (2)
CHEBI:35619 (2)
CHEBI:78646 (2)
CHEBI:78647 (2)
CHEBI:84687 (2)
CHEBI:84758 (2)
CHEBI:1148 (1)
CHEBI:12962 (1)
CHEBI:132968 (1)
CHEBI:133940 (1)
CHEBI:138389 (1)

Metabolite Name

(3S)-3-hydroxy-3-methylglutaryl-CoA (1)
(N(omega)-L-arginino)succinic acid (1)
(R)-3-(4-hydroxyphenyl)lactic acid (1)
11.29 393 257 217 (1)
11.29 397 425 471 (1)
11.77 287 285 (1)
12.62 539 449 359 217 (1)
16.20 456 297 355 (1)
16.26 456 297 355 (1)
1H-Indole-3-acetamide (1)
2'-deoxyadenosine 5'-monophosphate (1)
2'-deoxycytidine (1)
2'-deoxycytosine 5'-monophosphate (1)
2'-deoxyguanosine (1)
2'-deoxyguanosine 3'-monophosphate (1)
2'-deoxyuridine (1)
2-Hydroxybutyric acid (1)
2-Phenylglycine (1)
2-hydroxyglutaric acid (1)
2-methyl-Butanoic acid (1)
2-oxoadipic acid (1)
2-oxobutanoic acid (1)
2-oxosuccinamic acid (1)
3'-AMP (1)
3'-UMP (1)
3-3-Hydroxyphenyl-3-hydroxypropanoic acid (1)
3-Aminoisobutanoic acid (1)
3-Hydroxybutyric acid (1)
3-Hydroxyisovaleric acid (1)
3-Hydroxyphenylacetic acid (1)

First Public Date

2023 (1)

Modification

15.994915 (1)
57.021464 (1)
6.020129 (1)

Study type

Transcription profiling by array (44)
ChIP-chip by tiling array (9)
RNA-seq of coding RNA (5)
Unknown experiment type (1)
Other (1)
ChIP-seq (1)

Release Date

2024 (61)
2025 (59)
2022 (53)
2023 (51)
2021 (36)
2020 (27)
2018 (27)
2015 (21)
2019 (21)
2017 (19)
2010 (19)
2008 (19)
2016 (18)
2013 (17)
2014 (14)
2012 (11)
2026 (11)
2011 (9)
2007 (6)
2009 (4)
2002 (1)
2005 (1)
2004 (1)
2003 (1)

Lab affiliation

Academia Sinica (1)
Bio21 Mass Spectrometry and Proteomics Facility, The University of Melbourne, Parkville, Victoria 3010, Australia (1)
Bio21 Mass Spectrometry and Proteomics Facility, The University of Melbourne, Parkville, Victoria 3052, Australia (1)
Case Western Reserve University (1)
Chang Gung University Department of Medical Biotechnology and Laboratory Science (1)
Department of Medical Biotechnology and Laboratory Science, College of Medicine, Chang Gung University, Taoyuan, Taiwan, ROC (1)
Department of Radiation Oncology, University of Texas Health Science Center at San Antonio (1)
European Molecular Biology Laboratory (1)
National Taiwan University College of Medicine (1)
The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Victoria 3010, Australia (1)
Translational Biomedical Proteomics Laboratory, Institute of Molecular and Cell Biology, A*STAR, Singapore 138673, Singapore (1)

Tags

xref:PubMed:36950384 (1)

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V(D)J Rearrangement Is Dispensable for Producing CDR-H3 Sequence Diversity in a Gene Converting Species.

Not available

S-EPMC6008532 | biostudies-literature

Variation in flavonoid and antioxidant activities of Pyrrosia petiolosa (Christ) Ching from different geographic origins.

Not available

S-EPMC10140315 | biostudies-literature

Protein interaction studies in human induced neurons indicate convergent biology underlying autism spectrum disorders

Pintacuda G*, Hsu YH*, Tsafou K, Li KW, Martín JM, Riseman J, Biagini JC, Ching JKT, Mena D, Gonzalez-Lozano MA, Egri SB, Jaffe J, Smit AB, Fornelos N, Eggan KC, Lage K. Protein interaction studies in human induced neurons indicate convergent biology underlying autism spectrum disorders. Cell Genomi...

ORGANISM(S): Homo Sapiens (ncbitaxon:9606)

2021-06-21 | MSV000087676 | MassIVE

Protein interaction studies in human induced neurons indicate convergent biology underlying autism spectrum disorders

ORGANISM(S): Homo sapiens

2023-01-17 | GSE178896 | GEO

Small Perturbation Approach Reveals Transcriptomic Steady State

The â??small perturbationâ?? approach is critical in studying the â??steady stateâ?? of a biological system. In our experiments, small perturbations were generated by applying a series of repeating intermittent small doses of ultraviolet radiation to a human keratinocyte cell line, HaCaT. The biolog...

ORGANISM(S): Homo sapiens

2010-06-24 | E-GEOD-7060 | biostudies-arrayexpress

Phase I trial of lenalidomide and CCI-779 in patients with relapsed multiple myeloma: evidence for lenalidomide-CCI-779 interaction via P-glycoprotein.

Not available

S-EPMC3164245 | biostudies-literature

Phase I Study of Selinexor, a Selective Inhibitor of Nuclear Export, in Combination With Fludarabine and Cytarabine, in Pediatric Relapsed or Refractory Acute Leukemia.

Not available

S-EPMC5477824 | biostudies-literature

Ubiquitin-mediated sequestration of normal cellular proteins into polyglutamine aggregates.

Not available

S-EPMC166409 | biostudies-literature

A gene atlas of the mouse and human protein-encoding transcriptomes.