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TranscriptomicsGene expression in S1 panicles of Ubi1:AtJMT transgenic plants and drought-treated nontransgenic rice plants
To identify genes that are regulated by MeJA and drought, global expression profilings were performed on panicles from Ubi1:AtJMT, drought-treated NT, and untreated NT plants. The underlying assumption of this approach was that high levels of MeJA produced either by overexpression of AtJMT in the tr...
ORGANISM(S): Oryza sativa 
2009-07-09 | E-GEOD-14508 | biostudies-arrayexpress
TranscriptomicsExpression analysis of RCc3:OsNAC10 and GOS2:OsNAC10 transgenic rice plants
For identification of genes up-regulated in RCc3:OsNAC10, GOS2:OsNAC10 plants, total RNA (100 μg) was prepared from root and leaf tissues of 14-d-old transgenic and non-transgenic rice seedlings (Oryza sativa cv Nipponbare) grown under normal growth conditions. Expression profiling was conducted usi...
ORGANISM(S): Oryza sativa 
2011-09-05 | E-GEOD-31858 | biostudies-arrayexpress
TranscriptomicsGene expression of two-week old seedlings of OsCc1:OsbHLH148 transgenic rice plants
To understand downstream genes affected by overexpression of OsbHLH148, the Rice 3’-Tiling Microarray analysis (GreenGene Biotech, Yongin, Korea) was carried out to profile gene expression of OsCc1:OsbHLH148 transgenic plants in comparison with wild-type plants under normal growth conditions. RNA sa...
ORGANISM(S): Oryza sativa 
2011-01-01 | E-GEOD-22676 | biostudies-arrayexpress
MetabolomicsEcological adaptation and succession of human fecal microbial communities in an automated in vitro fermentation system
Longitudinal studies of gut microbiota following specific interventions are vital for understanding how they influence host health. However, robust longitudinal sampling of gut microbial communities is a major challenge, which can be addressed using in vitro fermenters hosting complex microbial comm...
2021-07-15 | MTBLS2531 | MetaboLights
TranscriptomicsOrganogenic nodule formation from internodes of Humulus lupulus
Transcriptional profiling of hop samples throughout in vitro culture on medium with sucrose and hormones IAA and BAP Study of gene expression involved in stress response during in vitro culture and in organogenic nodule formation Hop (Humulus lupulus L.) is an economically important plant forming ...
ORGANISM(S): Humulus lupulus 
2008-09-01 | E-GEOD-12339 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Saccharomyces cerevisiae pGAL1-MKS1, pGAL1-NNK1, and pGAL1-FMP48 overexpression
Analysis of the transcriptional effects of pGAL1-MKS1, pGAL1-NNK1, and pGAL1-FMP48 overexpression. BY4700 gal1::NAT ura3delta0 S. cerevisiae cells carrying a [pGAL1-MKS1-HA, URA3, CEN], [pGAL1-NNK1-HA, URA3, CEN], or [pGAL1-FMP48-HA, URA3, CEN] plasmid, or empty vector BG1805, were grown to early lo...
ORGANISM(S): Saccharomyces cerevisiae 
2010-05-25 | E-MEXP-2171 | biostudies-arrayexpress
TranscriptomicsExpression analysis of RCc3:OsNAC1 and GOS2:OsNAC1 transgenic rice plants
For identification of genes up-regulated in RCc3:OsNAC1, GOS2:OsNAC1 plants, total RNA (100 μg) was prepared from root tissues of 14-d-old transgenic and non-transgenic rice seedlings (Oryza sativa cv Nipponbare) grown under normal growth conditions. Expression profiling was conducted using a Rice 3...
ORGANISM(S): Oryza sativa 
2012-03-01 | E-GEOD-31855 | biostudies-arrayexpress
TranscriptomicsComparisons of toxicogenomic responses in zebrafish (Danio rerio) exposed to different sized AgNPs: The impact of size on global gene expression profiles
To investigate the patterns of global gene expression profiles modulated by the different sized AgNPs and to differentiate their modes of toxicity, zebrafish (Danio rerio) will be exposed to the AgNPs (50, and 150nm) and used for microarray analysis by Agilent Zebrafish Oligo Microarray system. 334 ...
ORGANISM(S): Danio rerio 
2016-07-03 | E-GEOD-50718 | biostudies-arrayexpress
TranscriptomicsExpression analysis of RCc3:OsNAC5 and GOS2:OsNAC5 transgenic rice plants
For identification of genes up-regulated in RCc3:OsNAC5, GOS2:OsNAC5 plants, total RNA (100 μg) was prepared from root tissues of 14-d-old transgenic and non-transgenic rice seedlings (Oryza sativa cv Nipponbare) grown under normal growth conditions. Expression profiling was conducted using a Rice 3...
ORGANISM(S): Oryza sativa 
2012-03-01 | E-GEOD-31856 | biostudies-arrayexpress
TranscriptomicsExpression analysis of RCc3:OsNAC6 and GOS2:OsNAC6 transgenic rice plants
For identification of genes up-regulated in RCc3:OsNAC6, GOS2:OsNAC6 plants, total RNA (100 μg) was prepared from root tissues of 14-d-old transgenic and non-transgenic rice seedlings (Oryza sativa cv Nipponbare) grown under normal growth conditions. Expression profiling was conducted using a Rice 3...
ORGANISM(S): Oryza sativa 
2012-03-01 | E-GEOD-31857 | biostudies-arrayexpress
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