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TranscriptomicsGene expression of pancreatic cancer cells
Global gene expression profiling on replicates of 9 pancreatic cancer cell lines (L3.6pl, BxPC3, CFPAC, SU8686, Panc-1, Hs766T, AsPC1, MIAPaca-2, MPanc 96) and normal HPDE cells was performed to elucidate multi-drug sensitivity/ resistance. Keywords: D microarray (Illumina human 2) Duplicates of 9 ...
ORGANISM(S): Homo sapiens 
2010-06-24 | E-GEOD-15550 | biostudies-arrayexpress
TranscriptomicsGenome wide expression analysis of FABP4 modulation in urothelial cancer cell UM-UC14 and UM-UC9
Analysis of gene expression profiling in FABP4 modulation UM-UC14 and Um-UC9 cells. The overall objective was to identify genes regulated by PPARγ signaling pathway in particular FABP4 Total RNA was obtained from FABP4 modulated (either by FABP4 knockdown or rosiglitazone treatment) UM-UC14 or UM-U...
ORGANISM(S): Homo sapiens 
2013-09-15 | E-GEOD-47993 | biostudies-arrayexpress
TranscriptomicsIdentification of subsets of urothelial carcinoma
Identification of bladder cancer subsets 142 primary bladder tumors including superficial and invasive tumors were arrayed. 73 invasive tumors out of 142 tumors were used for muscle invasive baldder cancer classification
ORGANISM(S): Homo sapiens 
2014-02-10 | E-GEOD-48075 | biostudies-arrayexpress
TranscriptomicsTumors with neoadjuvant chemotherapy
Using whole genome mRNA expression profiling of primary human tumors and unsupervised hierarchical cluster analyses, 3 novel molecular subsets (basal, luminal and p53-like subsets) of muscle-invasive bladder cancer (MIBC) were identified. 23 MVAC treated samples were used for the validation of thr...
ORGANISM(S): Homo sapiens 
2014-02-10 | E-GEOD-52219 | biostudies-arrayexpress
TranscriptomicsGenome wide expression profiling of 30 urothelial cancer cells
Expression profiling of a panel of urothelial cancer cells. The goal of the study is to exam the genome wide expression profile in each of the 30 urothelial cancer cells tested in our laboratory Each of the 30 cell lines was DNA fingerprinted to confirm its real identity. Total RNA was obtained from...
ORGANISM(S): Homo sapiens 
2014-05-01 | E-GEOD-47992 | biostudies-arrayexpress
TranscriptomicsThe identification of downstream gene of p63, STAT3 and PPAR gamma
To identify the downstream gene of p63, STAT3 and PPARg signling Total RNA from p63 knock down UC14 and STAT3 knockdown Scaber cells were compared to control cells. Also Total RNA from Rosiglitazone treated UC7 cells were compared to untreated control.
ORGANISM(S): Homo sapiens 
2014-02-10 | E-GEOD-48124 | biostudies-arrayexpress
TranscriptomicsGene expression profiling of urothelial carcinoma
Identification of bladder cancer subsets 128 FFPE bladder tumors were used to validate the bladder cancer subsets
ORGANISM(S): Homo sapiens 
2014-02-10 | E-GEOD-48276 | biostudies-arrayexpress
TranscriptomicsPost dose-dense (dd) MVAC tumors
post dd MVAC tumors were used for the validation of bladder cancer subsets dd MVAC cohort consisted of 20 post-treatment tumors were used to validate the bladder cancer subsets Please note that the GEO accession number for the corresponding pretreatment sample (with matching TURBT Information) is p...
ORGANISM(S): Homo sapiens 
2014-02-10 | E-GEOD-52329 | biostudies-arrayexpress
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