Choy C C - OmicsDI

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Unknown (387)
Transcriptomics (32)
Proteomics (7)
Genomics (4)
Metabolomics (4)
Models (1)
Other (1)

Organisms

Homo sapiens (17)
Arabidopsis thaliana (7)
Oryza sativa temperate japonica subgroup (6)
Schwanniomyces etchellsii (6)
Cyperus rotundus (6)
Influenza A virus (A/California/07-00002/2009(H1N1)) (6)
Aedes albopictus C6/36 cell densovirus (6)
Cupriavidus metallidurans CH34 (6)
Euphausia superba (6)
Vibrio natriegens (6)
Limosilactobacillus fermentum CECT 5716 (6)
Aloe vera (6)
Francisella tularensis subsp. tularensis (6)
Synechococcus sp. WH 7803 (6)
Neisseria meningitidis 8013 (6)
Mengo virus (6)
Komagataeibacter europaeus (6)
soil metagenome (6)
Fusarium oxysporum f. sp. conglutinans Fo5176 (6)
Aspergillus oryzae (6)
Theileria parva (6)
Passiflora edulis (6)
Pseudoalteromonas prydzensis ACAM 620 (6)
Danio rerio (5)
Mus musculus (2)
Vibrio vulnificus (1)
Salmonella enterica subsp. enterica serovar Paratyphi A (1)
Salmonella enterica subsp. enterica serovar Montevideo (1)
Brassica rapa subsp. chinensis (1)
Saccharomyces cerevisiae (1)

Organisms

Brassica (1)

Repository

biostudies-arrayexpress (33)
pride (6)
MetaboLights (4)
EGA (2)
BioModels (1)
GPMDB (1)
MassIVE (1)
ENA (1)

Tissue

Epithelial cell (2)
Cell culture (2)
Vitreous humor (1)
Brain (1)
Liver (1)
Blood (1)

Disease

Non-small cell lung carcinoma (2)
Obesity (1)
Not Available (1)
Open-angle glaucoma (1)

Technology Type

Mass Spectrometry (6)
Affinity purification coupled with mass spectrometry proteomics (4)
Mass spectrometry (2)
Mass spectrometry assay (2)
Bottom-up proteomics (2)
Shotgun proteomics (2)
Data-independent acquisition (1)
Data-dependent acquisition (1)

Instrument Platform

Liquid Chromatography MS - negative - reverse phase (2)
Liquid Chromatography MS - positive - reverse phase (2)
Agilent microarray Scanner (1)
Agilent Microarray Hybridization Chamber Kit and Hybridization oven rotator (1)
Agilent miRNA Complete Labeling and Hyb Kit (1)
Extraction kit (1)
Illumina Genome Analyzer IIx (1)
Illumina NovaSeq 6000 (1)
Instrument (1)
Orbitrap Fusion (1)
Q Exactive Plus (1)
MaXis (Bruker) (1)

Publication Date

2026 (6)
2011 (6)
2012 (5)
2010 (5)
2025 (3)
2016 (3)
2024 (2)
2013 (2)
2008 (2)
2023 (2)
2015 (1)
2014 (1)
2009 (1)
2007 (1)
2004 (1)
2003 (1)
2017 (1)
2022 (1)
2018 (1)

CHEBI ID

CHEBI:176888 (1)
CHEBI:176348 (1)
CHEBI:193350 (1)
CHEBI:137604 (1)
CHEBI:134487 (1)
CHEBI:65294 (1)
CHEBI:65302 (1)
CHEBI:134270 (1)
CHEBI:134451 (1)
CHEBI:86472 (1)
CHEBI:16065 (1)
CHEBI:6052 (1)
CHEBI:131700 (1)
CHEBI:77131 (1)
CHEBI:134271 (1)
CHEBI:16384 (1)
CHEBI:75491 (1)
CHEBI:85851 (1)
CHEBI:66862 (1)
CHEBI:28499 (1)
CHEBI:16547 (1)
CHEBI:16546 (1)
CHEBI:15864 (1)
CHEBI:64431 (1)
CHEBI:64519 (1)
CHEBI:64525 (1)
CHEBI:64526 (1)
CHEBI:64446 (1)
CHEBI:64504 (1)
CHEBI:64523 (1)

Metabolite Name

Quercetin-3-glucuronide (1)
4-O-feruloylquinic acid (1)
3-Caffeoylquinic acid (1)
Phosphatidylethanolamine(38:4) (1)
Phosphatidylethanolamine(36:4) (1)
Phosphatidylethanolamine(36:1) (1)
Phosphatidylcholine(40:8) (1)
Phosphatidylcholine(40:4) (1)
Phosphatidylcholine(38:6) (1)
Phosphatidylcholine(38:5) (1)
Phosphatidylcholine(36:3) (1)
Phosphatidylcholine(36:2) (1)
Phosphatidylcholine(35:2) (1)
Phosphatidylcholine(34:1) (1)
Phosphatidylcholine(34:2) (1)
Phosphatidylcholine(33:5) (1)
Phosphatidylcholine(32:2) (1)
Phosphatidylcholine(32:0) (1)
Phosphatidylcholine(31:0) (1)
Phosphatidylcholine(33:1) (1)
Phosphatidylcholine(30:0) (1)
Phosphatidylcholine(28:0) (1)
440.0420@4.43min (1)
Sinapoylglucose (1)
471.083@4.43 (1)
Hydroxycamalexin hexoside2 (1)
Hydroxycamalexin hexoside1 (1)
363.069@5.95 (1)
205.08@5.21 (1)
191.143@8.09 (1)

IsPrivate

False (1)

Model Flag

Non Kinetic (1)

Submitter Keywords

FROG (1)

First Public Date

2025 (1)

Modelling Approach

Constraint-based model (1)

Study type

Transcription profiling by array (17)
Unknown experiment type (5)
Comparative genomic hybridization by array (5)
RNA-seq of coding RNA (2)
ChIP-chip by tiling array (1)
Genotyping by array (1)
ChIP-seq (1)
MicroRNA profiling by array (1)

Release Date

2021 (43)
2023 (40)
2022 (39)
2024 (37)
2019 (35)
2025 (34)
2020 (29)
2018 (23)
2016 (20)
2011 (16)
2015 (15)
2017 (15)
2012 (12)
2013 (10)
2014 (9)
2010 (9)
2026 (8)
2009 (7)
2008 (4)
2007 (4)
2004 (4)
2006 (2)
2003 (1)
2005 (1)
2002 (1)
2001 (1)
1999 (1)

Lab affiliation

Peter MacCallum Cancer Centre, Melbourne, Australia Department of Anatomy and Physiology, The University of Melbourne, Melbourne, VIC, Australia (2)
School of Biomedical Science, The Chinese University of Hong Kong (1)
Regeneron Pharmaceuticals, Tarrytown, NY (1)
Ophthalmology, Tan Tock Seng Hospital, Singapore (1)
Dana Farber Cancer Institute (1)

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Impact of Anaerobic Fermentation Liquid on Bok Choy and Mechanism of Combined Vitamin C from Bok Choy and Allicin in Treatment of DSS Colitis.

Not available

S-EPMC11899586 | biostudies-literature

Lignin-based controlled-release urea improves choy sum growth by regulating soil nitrogen nutrients and bacterial diversity.

Not available

S-EPMC11652836 | biostudies-literature

Endophytic mycobiont provides growth benefits via a Phenylpropanoid-Auxin axis in host plants

Beneficial association with symbiotic fungi helps improve the growth and fitness in most land plants, and shows great potential as biofertilizers in precision agriculture. Here, we demonstrated that a root fungal endophyte, Tinctoporellus species isolate AR8, enabled yield improvement in...

2025-04-11 | MTBLS12374 | MetaboLights

Effectiveness of Modalities to Teach Evidence Based Medicine to Pediatric Clerkship Students: A Randomized Controlled Trial.

Not available

S-EPMC7525332 | biostudies-literature

Single-base pair unwinding and asynchronous RNA release by the hepatitis C virus NS3 helicase.

Not available

S-EPMC4172460 | biostudies-literature

Quantitative chemical proteomic profiling of phosphoprotein phosphatases

We have developed a chemical proteomic strategy for the systematic interrogation of endogenous phosphoprotein phosphatases (PPP) and their interacting proteins, including regulatory and scaffolding subunits, and substrates (the 'PPPome'). PPPs are captured using an immobilized non-selective PPP inhi...

ORGANISM(S): Neurospora Crassa (ncbitaxon:5141) Candida Albicans (ncbitaxon:5476) Saccharomyces Cerevisiae (ncbitaxon:4932) Homo Sapiens (ncbitaxon:9606) Mus Musculus (ncbitaxon:10090) Schizosaccharomyces Pombe (ncbitaxon:4896)

2017-07-07 | MSV000081226 | MassIVE

Bis(benzoyl) phosphate inactivators of beta-lactamase C from Mtb.

Not available

S-EPMC7654513 | biostudies-literature

Inflammatory cytokines determine the susceptibility of human CD8 T cells to Fas-mediated activation-induced cell death through modulation of FasL and c-FLIP(S) expression.

Not available

S-EPMC3122175 | biostudies-literature

Treatment of Rheumatoid Arthritis With Anti-Tumor Necrosis Factor or Tocilizumab Therapy as First Biologic Agent in a Global Comparative Observational Study.

Not available

S-EPMC5656814 | biostudies-literature

Clinics in diagnostic imaging (191). Multiple system atrophy-cerebellar type (MSA-C).

Not available