Clover R R - OmicsDI

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Unknown (182)
Transcriptomics (104)
Proteomics (5)
Metabolomics (2)
Genomics (2)

Organisms

Medicago truncatula (57)
Homo sapiens (13)
Bos taurus (6)
Arabidopsis thaliana (5)
Mus musculus (2)
Streptococcus suis P1/7 (1)
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 (1)
Zostera marina (1)
Arachis hypogaea (1)
Panicum virgatum (1)
Trifolium repens (1)
Trifolium pratense (1)
Ciona intestinalis (1)
Zea mays (1)
Solanum lycopersicum (1)
Glycine max (1)
Oryza sativa Japonica Group (1)
Escherichia coli (1)

Organisms

Rhizobium leguminosarum bv. trifolii (1)

Repository

biostudies-arrayexpress (105)
MetaboLights (2)
pride (2)
ENA (2)
MassIVE (1)
PAXDB (1)

Tissue

Cell culture (2)
Permanent cell line cell (2)

Disease

Normal (2)
1dpi (1)
Mixed disorder as reaction to stress (1)

Technology Type

Mass spectrometry (2)
Mass Spectrometry (2)
Shotgun proteomics (2)
Affinity purification coupled with mass spectrometry proteomics (1)

Instrument Platform

Other (2)
Illumina HiSeq 2000 (2)
ScanArray 4000 [PerkinElmer] (1)
NextSeq 500 (1)
LTQ Orbitrap Elite (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - alternating - reverse phase (1)

Publication Date

2010 (25)
2013 (19)
2012 (12)
2011 (12)
2009 (9)
2014 (7)
2015 (5)
2008 (5)
2007 (4)
2017 (3)
2016 (3)
2023 (2)
2006 (1)
2021 (1)
2020 (1)
2026 (1)
2022 (1)

UNIPROT ID/AC

ACP_PERMH (1)
ATPG_PERMH (1)
C0QP56_PERMH (1)
C0QP86_PERMH (1)
C0QP87_PERMH (1)
C0QP88_PERMH (1)
C0QPE3_PERMH (1)
C0QPJ7_PERMH (1)
C0QPM6_PERMH (1)
C0QPS3_PERMH (1)
C0QPT8_PERMH (1)
C0QPY8_PERMH (1)
C0QQ64_PERMH (1)
C0QQH6_PERMH (1)
C0QQK8_PERMH (1)
C0QQN5_PERMH (1)
C0QQP8_PERMH (1)
C0QQQ1_PERMH (1)
C0QQS8_PERMH (1)
C0QRD3_PERMH (1)
C0QRQ7_PERMH (1)
C0QRR8_PERMH (1)
C0QRY6_PERMH (1)
C0QS32_PERMH (1)
C0QS33_PERMH (1)
C0QS34_PERMH (1)
C0QSF3_PERMH (1)
C0QSI7_PERMH (1)
C0QSK2_PERMH (1)
C0QSM1_PERMH (1)

CHEBI ID

CHEBI:10037 (1)
CHEBI:10072 (1)
CHEBI:10073 (1)
CHEBI:10136 (1)
CHEBI:10138 (1)
CHEBI:10225 (1)
CHEBI:10276 (1)
CHEBI:10319 (1)
CHEBI:105 (1)
CHEBI:10561 (1)
CHEBI:108595 (1)
CHEBI:109895 (1)
CHEBI:113528 (1)
CHEBI:113542 (1)
CHEBI:125255 (1)
CHEBI:131607 (1)
CHEBI:131988 (1)
CHEBI:131993 (1)
CHEBI:132121 (1)
CHEBI:132364 (1)
CHEBI:132559 (1)
CHEBI:132583 (1)
CHEBI:132629 (1)
CHEBI:132744 (1)
CHEBI:132745 (1)
CHEBI:132793 (1)
CHEBI:132893 (1)
CHEBI:132983 (1)
CHEBI:133246 (1)
CHEBI:133842 (1)

Metabolite Name

(+)-1,5-Epoxy-nor-ketoguaia-11-ene (1)
(+)-2-N-Methylfangchinoline (1)
(+)-2-N-Methyltetrandrine (1)
(+)-Ammodendrine (1)
(+)-Erythro-guaiacylglycerol (1)
(+)-Fangchinoline (1)
(+)-Iridodial (1)
(+)-Karanone (1)
(+)-Magnoflorine (1)
(+)-Mahanimbine (1)
(+)-Nootkatone (1)
(+/-)-Anabasine (1)
(+/-)-Car-3-ene-2,5-dione (1)
(+/-)12(13)-DiHOME (1)
(+/-)5(6)-EET (1)
(-)-(2S)-6-Methoxy-[2'',3'':7,8]-furanoflavanone (1)
(-)-1,10-Epoxy-guaia-11-ene (1)
(-)-10-Epi-gamma-eudesmol (1)
(-)-12beta-Hydroxylsophocarpine (1)
(-)-2,3-Dihydro-2-(1-methylethenyl)-5-benzofurancarboxylic acid methyl ester (1)
(-)-2beta-Hydroperoxykolavelool (1)
(-)-2beta-Hydroxykolavelool (1)
(-)-3,4-Di-epi-3,7-trifara-9,14-diene (1)
(-)-Bonyl ferulate (1)
(-)-Epiafzelechin (1)
(-)-Eudesm-3-ene-6alpha-acetoxy-7alpha-ol (1)
(-)-Gallocatechin (1)
(-)-Isochaminic acid (1)
(-)-Jasmonic acid (1)
(-)-Methyl selina-3,11-dien-14-oate (1)

First Public Date

2026 (1)
2025 (1)

Study type

Transcription profiling by array (85)
Comparative genomic hybridization by array (9)
RNA-seq of coding RNA (5)
RNA-seq of non coding RNA (4)
Unknown experiment type (1)
Proteomic profiling by array (1)

Release Date

2010 (29)
2022 (23)
2013 (22)
2024 (21)
2020 (21)
2023 (20)
2021 (17)
2016 (15)
2012 (14)
2019 (14)
2017 (13)
2011 (13)
2025 (13)
2014 (10)
2009 (10)
2018 (8)
2015 (7)
2008 (7)
2007 (4)
2005 (2)
1999 (2)
2006 (1)
2003 (1)

Lab affiliation

Department of Biochemistry and System Biology, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, L69 7ZB, UK (1)
The Scripps Research Institute, La Jolla, CA 92037, USA (1)

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RNA-seq of two Trifolium pratense genotypes, Tripo and Lasang, from early to late developmental stages of flower development

Red clover (Trifolium pratense L.) is one of the most important legume forage species in temperate livestock agriculture. Tetraploid red clover cultivars are generally producing less seed than diploid cultivars. Improving the seed setting potential of tetraploid cultivars is necessary in order to ut...

ORGANISM(S): Trifolium pratense

2017-01-31 | E-MTAB-5117 | biostudies-arrayexpress

Transcription profiling of white clover plants following infection by white clover mosaic virus

White clover mosaic virus (WCMV) is a major pathogen of white clover (Trifolium repens L.), with significant effects on yield and persistence. Due to the absence of natural sources of WCMV resistance a transgenic strategy has been employed to produce plants constitutively expressing WCMV replicase g...

ORGANISM(S): Trifolium repens

2010-06-30 | E-MEXP-1688 | biostudies-arrayexpress

Composition of Proteins Associated with Red Clover (Trifolium pratense) and the Microbiota Identified in Honey.

Not available

S-EPMC11278118 | biostudies-literature

Persistence of the Immune Responses and Cross-Neutralizing Activity With Variants of Concern Following 2 Doses of Adjuvanted SCB-2019 Coronavirus Disease 2019 Vaccine.

Not available

S-EPMC8499965 | biostudies-literature

RNA-seq of Medicago truncatula A17 and the ethylene insensitive sickle mutant interacting with the fungal root pathogen, Rhizoctonia solani AG8

This study compares the response of wild type (A17) and ethylene insensitive mutant (sickle) lines of the model legume Medicago truncatula to infection by the root-infecting necrotrophic fungal pathogen, Rhizoctonia solani AG8 (WAC10335). Two time points were taken, 2 and 7 days after inoculation al...

ORGANISM(S): Medicago truncatula

2017-06-06 | E-MTAB-5473 | biostudies-arrayexpress

A Non-destructive Method to Quantify Leaf Starch Content in Red Clover.

Not available

S-EPMC7593268 | biostudies-literature

Effects of Titanium Dioxide Nanoparticles on Red Clover and Its Rhizobial Symbiont.

Not available

S-EPMC4865228 | biostudies-literature

Rhizobium leguminosarum bv. trifolii NodD2 Enhances Competitive Nodule Colonization in the Clover-Rhizobium Symbiosis.

Not available

S-EPMC7480365 | biostudies-literature

Near-Atomic-Resolution Cryo-Electron Microscopy Structures of Cucumber Leaf Spot Virus and Red Clover Necrotic Mosaic Virus: Evolutionary Divergence at the Icosahedral Three-Fold Axes.