Cohen F F - OmicsDI

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Homo sapiens (47)
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Organisms

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2009 (1)
2003 (1)

CHEBI ID

CHEBI:16199 (5)
CHEBI:30769 (5)
CHEBI:15428 (4)
CHEBI:16335 (4)
CHEBI:16737 (4)
CHEBI:30915 (4)
CHEBI:32816 (4)
CHEBI:15318 (3)
CHEBI:15354 (3)
CHEBI:15724 (3)
CHEBI:15887 (3)
CHEBI:15891 (3)
CHEBI:16027 (3)
CHEBI:16235 (3)
CHEBI:16414 (3)
CHEBI:16704 (3)
CHEBI:16755 (3)
CHEBI:16914 (3)
CHEBI:16919 (3)
CHEBI:16977 (3)
CHEBI:17033 (3)
CHEBI:17234 (3)
CHEBI:17268 (3)
CHEBI:17345 (3)
CHEBI:17368 (3)
CHEBI:17568 (3)
CHEBI:17596 (3)
CHEBI:17754 (3)
CHEBI:17768 (3)
CHEBI:17802 (3)

Metabolite Name

Adenosine (3)
Choline (3)
Creatine (3)
L-Histidine (3)
L-Proline (3)
2'-O-methylcytidine (2)
3-methylcytidine (2)
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Creatinine (2)
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Guanine (2)
Indoleacetic acid (2)
L-Alanine (2)
L-Carnitine (2)
L-Glutamate (2)
L-Glutamine (2)
L-Isoleucine (2)
L-Lysine (2)
L-Phenylalanine (2)
L-Threonine (2)
L-Tyrosine (2)
L-Valine (2)
N1-Methyl-2-pyridone-5-carboxamide (2)
Trimethylamine N-oxide (2)
Urea (2)

IsPrivate

False (1)

First Public Date

2014 (2)
2013 (1)

Classification

protozoa (1)

Modelling Approach

Logical model (1)

Study type

Transcription profiling by array (47)
RNA-seq of coding RNA (9)
ChIP-seq (6)
Unknown experiment type (4)
Comparative genomic hybridization by array (3)
Methylation profiling by high throughput sequencing (2)
Methylation profiling by array (1)

Release Date

2022 (391)
2021 (383)
2023 (329)
2024 (328)
2025 (317)
2020 (239)
2019 (204)
2018 (171)
2017 (154)
2016 (147)
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2012 (77)
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2007 (12)
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2002 (6)
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2000 (1)
1999 (1)
1998 (1)
1997 (1)

Lab affiliation

Department of Molecular Cell Biology, Weizmann Institute of Science, Rehovot, Israel (2)
Biochemistry and Molecular Biology, The Institute for Medical Research Israel-Canada (IMRIC). School of Medicine. The Hebrew University of Jerusalem, Israel. (1)
Charité Universitätsmedizin, Department of Biochemistry, 10117 Berlin, Germany The Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford OX3 7BN, UK Max Planck Institute for Molecular Genetics, Berlin, Germany (1)
Cornell University (1)
Departement for Biomedical Research University of Bern Switzerland (1)
Department of Biochemistry and Molecular Genetics, University of Anschutz Medical Campus, Aurora CO (1)
Department of Infection, Immunity and Inflammation, University of Leicester, Leicester, LE1 9HN (1)
Department of Medicine, Weill Cornell Medicine, New York, NY, USA (1)
Department of Physiology and Pharmacology Oregon Health & Science University Portland, Oregon 97210, USA (1)
Department of Systems Immunology, Weizmann Institute of Science, Rehovot, Israel (1)
Departments of Molecular Genetics and Molecular Neuroscience (1)
Discovery Proteomics Facility University of Oxford (1)
Faculty of Biology, Technion – Israel Institute of Technology Haifa 32000, Israel (1)
Leicester Tuberculosis Research Group Department of Infection, Immunity and Inflammation University of Leicester Leicester LE1 9HN United Kingdom (1)
MRC Protein Phosphorylation and Ubiquitylation Unit, The Sir James Black Centre, University of Dundee, United Kingdom (1)
Molecular Cell Biolody, Weizmann Institute of Science. (1)
President Leibniz-Institut für Analytische Wissenschaften – ISAS – e.V. Otto-Hahn-Str. 6b 44227 Dortmund, Germany P: +49 (0)2 31.13 92-100 F: +49 (0)2 31.13 92-200 albert.sickmann@isas.de www.isas.de www.twitter.com/isas_Leibniz (1)
Professor, Department of Cellular and Molecular Pharmacology (1)
Professor. Tier 1 Canada Research Chair in Marine Microbial Genomics and Biogeochemistry. Department of Biology, Dalhousie University (1)
Quantitative Biosciences Institute (QBI), University of California, San Francisco, San Francisco, CA USA J. David Gladstone Institutes, San Francisco, San Francisco, CA, USA Department of Bionengineer and Therapeutic Sciences, University of California, San Francisco, San Francisco, CA, USA (1)
School of Life Sciences Faculty of Sciences University of Technology Sydney Australia (1)
The Rockefeller University (1)
Translational Metabolic Laboratory, Department of Laboratory Medicine, Radboudumc, Nijmegen, The Netherlands (1)
Vascular Biology Section, Boston University School of Medicine, Boston, MA (1)

Tags

xref:PubMed:19073607 (1)
xref:PubMed:16682451 (1)
xref:PubMed:22561152 (1)
pathogen:protozoan (1)
pathogen (1)

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Enantioselective total synthesis of batzelladine F and definition of its structure.

Not available

S-EPMC2535800 | biostudies-literature

Metabolic Profiling of Volatile Organic Compounds (VOCs) Emitted by the Pathogens Francisella tularensis and Bacillus anthracis in Liquid Culture

We conducted comprehensive (untargeted) metabolic profiling of volatile organic compounds (VOCs) emitted in culture by bacterial taxa Francisella tularensis (F. tularensis) subspecies novicida and Bacillus anthracis (B. anthracis) Sterne, surrogates for potential bacterial bioterrorism agents, as we...

2020-08-20 | MTBLS1737 | MetaboLights

Evolution of a strategy for the synthesis of structurally complex batzelladine alkaloids. Enantioselective total synthesis of the proposed structure of batzelladine F and structural revision.

Not available

S-EPMC2535801 | biostudies-literature

Transcription profiling of Vibrio cholerae isolated from patients in stationary phase

All arrays used in Hyperinfectivity study Merrell DS, Butler SM, Qadri F, Dolganov NA, Alam A, Cohen MB, Calderwood SB, Schoolnik GK, Camilli A. Related Articles Host-induced epidemic spread of the cholera bacterium. Nature. 2002 Jun 6;417(6889):642-5. PMID: 12050664 A=patient A, B=patient B, C=...

ORGANISM(S): Vibrio cholerae

2005-07-21 | E-SMDB-1384 | biostudies-arrayexpress

Membrane-proximal F-actin restricts local membrane protrusions and directs cell migration.

Not available

S-EPMC8283920 | biostudies-literature

Transcription profiling of Vibrio cholerae isolated from clinical samples, grown in minimal and rich media in order to validate predicted metabolic pathways

Vibrio cholerae, the etiological agent of the diarrheal illness cholera, can kill an infected adult in 24 h. V.cholerae lives as an autochthonous microbe in estuaries, rivers and coastal waters. A better understanding of its metabolic pathways will assist the development of more effective treatments...

ORGANISM(S): Vibrio cholerae

2013-01-30 | E-SMDB-3690 | biostudies-arrayexpress

Evidence supporting predicted metabolic pathways for Vibrio cholerae: gene expression data and clinical tests

Abstract: Vibrio cholerae, the etiological agent of the diarrheal illness cholera, can kill an infected adult in 24 h. V.cholerae lives as an autochthonous microbe in estuaries, rivers and coastal waters. A better understanding of its metabolic pathways will assist the development of more effective ...

ORGANISM(S): Vibrio cholerae

2006-05-20 | E-GEOD-4877 | biostudies-arrayexpress

Clusters versus affinity-based approaches in F. tularensis whole genome search of CTL epitopes.

Not available

S-EPMC3341354 | biostudies-literature

The hnRNP F/H homologue of Trypanosoma brucei is differentially expressed in the two life cycle stages of the parasite and regulates splicing and mRNA stability.

Not available

S-EPMC3711420 | biostudies-literature

High frequency of COH1 intragenic deletions and duplications detected by MLPA in patients with Cohen syndrome.

Not available

S-EPMC2987453 | biostudies-literature