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GenomicsChromatin accessibility in human colonic fibroblasts
Chromatin accessibility in human colonic fibroblasts
PRJNA1423714 | ENA
ProteomicsLoss of colonic primary cilia promotes inflammation and carcinogenesis
Primary cilia (PC) are important signaling hubs in cells and we explored their role in colorectal cancer (CRC) and colitis. In the colon we found PC to be mostly present on different subtypes of fibroblasts and exposure of mice to either chemically induced colitis-associated colon carcinogenesis (CA...
ORGANISM(S): Mus musculus (Mouse) 
2022-11-29 | PXD033440 | Pride
Colon carcinogenesis Inflammation Primary cilia Colonic fibroblasts Colitis 
GenomicsBulk RNA-seq of young, pre-senescent, and senescent colonic fibroblasts
Bulk RNA-seq of young, pre-senescent, and senescent colonic fibroblasts
PRJNA1327194 | ENA
GenomicsBulk RNA-seq of pre-senescent, and siDUSP4-treated colonic fibroblasts
Bulk RNA-seq of pre-senescent, and siDUSP4-treated colonic fibroblasts
PRJNA1328744 | ENA
GenomicsBulk RNA-seq of primary colonic epithelial cells treated with conditioned medium of either young or presenescent primary colonic fibroblasts
Bulk RNA-seq of primary colonic epithelial cells treated with conditioned medium of either young or presenescent primary colonic fibroblasts
PRJNA1328739 | ENA
TranscriptomicsCarcinoma-associated fibroblasts’ transcriptomic program predicts clinical outcome in stage II/III colorectal cancer
We obtained fibroblast cultures from fresh surgical specimen ressected from patients with primary colorectal carcinoma: normal colonic fibroblasts (NCF=9) from the normal colonic mucosa at least 5-10cm from the surgical margin, carcinoma-associated fibroblasts from the primary tumor (CAF-PT=14) and ...
ORGANISM(S): Homo sapiens 
2013-05-10 | E-GEOD-46824 | biostudies-arrayexpress
GenomicsIL-36R stimulation of colonic mouse fibroblasts
IL-36R stimulation of colonic mouse fibroblasts
PRJEB10270 | ENA
TranscriptomicsIL-36R stimulation of colonic mouse fibroblasts
Intestinal fibroblasts from the colons of C57BL/6 wild-type mice were grown in the presence or absence of IL-36ÉŁ (30 ng/ml) for 4 hours. The experimental setup included 6 samples from 3 colons in a pairwise design (3 stimulated vs 3 unstimulated). Profiling of whole-genome transcriptomic patterns w...
ORGANISM(S): Mus musculus 
2015-12-31 | E-MTAB-3814 | biostudies-arrayexpress
UnknownData from a proteomic analysis of colonic fibroblasts secretomes.
Not available
S-EPMC4459868 | biostudies-literature
TranscriptomicsBulk RNA-seq of primary colonic epithelial cells treated with conditioned medium of either young or presenescent primary colonic fibroblasts
Bulk RNA-seq of primary colonic epithelial cells treated with conditioned medium of either young or presenescent primary colonic fibroblasts
ORGANISM(S): Homo sapiens 
2026-08-01 | GSE308105 | GEO
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