Costa V V - OmicsDI

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Unknown (3127)
Proteomics (93)
Transcriptomics (87)
Genomics (27)
Metabolomics (24)

Organisms

Homo sapiens (105)
Mus musculus (28)
Saccharomyces cerevisiae (10)
Arabidopsis thaliana (9)
Rattus norvegicus (5)
Bos taurus (3)
Malus domestica (2)
Escherichia coli (2)
Granulicella sp. (2)
Plasmodium falciparum 3D7 (2)
Pseudotsuga menziesii (2)
Schizosaccharomyces pombe 972h- (2)
Jatropha curcas (1)
Stenotrophomonas maltophilia (1)
Leishmania chagasi (1)
Euphausia superba (1)
Prunus persica (1)
Heliconius melpomene (1)
Citrus sinensis (1)
Paracoccidioides brasiliensis (1)
Vitis vinifera (1)
Canis lupus familiaris (1)
Pseudomonas aeruginosa (1)
Drosophila melanogaster (1)
Danio rerio (1)
Euphorbia dendroides (1)
Homo (1)
Amblyomma sculptum (1)
Angiostrongylus costaricensis (1)
Architeuthis dux (1)

Organisms

Homo sapiens (1)

Repository

biostudies-arrayexpress (97)
pride (91)
MetaboLights (18)
EGA (15)
GNPS (6)
ENA (3)
MassIVE (2)

Tissue

Cell culture (17)
Blood (7)
Brain (6)
Blood cell (5)
Skin (5)
Blood plasma (4)
Fibroblast (4)
Kidney (3)
Blood serum (2)
Cerebrospinal fluid (2)
Colon (2)
Heart (2)
Liver (2)
Melanocyte (2)
Plant cell (2)
Saliva (2)
Stem cell (2)
T cell (2)
Abdominal adipose tissue (1)
Astrocyte (1)
Bile (1)
Bile duct (1)
Blood platelet (1)
Blood-lymph (1)
Bone marrow (1)
Cell suspension culture (1)
Choroidal melanocyte (1)
Cotyledon (1)
Egg (1)
HUVEC cell (1)

Disease

COVID-19 (3)
Multiple sclerosis (3)
Uveal melanoma (3)
Melanoma (2)
Plasmodium falciparum malaria (2)
Burkitt lymphoma (1)
Acute leukemia (1)
Alzheimer's disease 1 (1)
Bloom syndrome (1)
Brain cancer (1)
Breast cancer (1)
Chagas disease (1)
Chikungunya (1)
Childhood extraosseous osteosarcoma (1)
Cholangiocarcinoma (1)
Chronic bronchitis (1)
Colon cancer (1)
Embryonal rhabdomyosarcoma (1)
Fibrosarcoma (1)
Glioblastoma (1)
Head and neck cancer (1)
Lung carcinoma (1)
Major depressive disorder (1)
Malignant mesothelioma (1)
Neuroblastoma (1)
Pancreatic cancer (1)
Parkinson's disease (1)
Peripheral primitive neuroectodermal tumor (1)
Plasmodium vivax malaria (1)
Prostate adenocarcinoma (1)

Technology Type

Mass Spectrometry (91)
Shotgun proteomics (60)
Mass spectrometry (18)
Bottom-up proteomics (13)
Gel-based experiment (6)
Chemical cross-linking coupled with mass spectrometry proteomics (5)
Data-dependent acquisition (5)
HDMSE (5)
Affinity purification coupled with mass spectrometry proteomics (4)
Top-down proteomics (4)
Data-independent acquisition (3)
NMR spectroscopy (2)
SWATH MS (2)
AB 5500 Genetic Analyzer (1)
Illumina Genome Analyzer II, Affymetrix snp 6.0, Illumina Genome Analyzer IIx, GPL570, Affymetrix GeneChip Human Genome U133 plus 2.0 (1)
Immunopeptidomics (1)
MSE (1)
SRM/MRM (1)

Instrument Platform

Liquid Chromatography MS - positive - reverse phase (5)
Illumina NovaSeq 6000 (3)
Liquid Chromatography MS - Negative (LC-MS (Negative)) (3)
Liquid Chromatography MS - negative - hilic (3)
Liquid Chromatography MS - positive - hilic (3)
Illumina HiSeq 2000 (2)
LTQ Orbitrap XL (2)
Xevo G2-XS QTof (2)
LTQ Orbitrap Elite (2)
Gas Chromatography MS - positive (2)
Liquid Chromatography MS - Alternating (LC-MS (Alternating)) (2)
Liquid Chromatography MS - negative - reverse phase (2)
Nuclear Magnetic Resonance (NMR) - (2)
PromethION (1)
AB SOLiD 4 System (1)
Illumina Genome Analyzer IIx (1)
N/A (1)
Illumina HiSeq 2500 (1)
MicrOTOF-Q II (1)
Q Exactive Plus (1)
Dionex UltiMate 3000 RSLC System (Thermo) (1)
Exactive (Thermo Scientific) (1)
Gas Chromatography MS - Positive (GC-MS (Positive)) (1)
Liquid Chromatography MS - (1)
Liquid Chromatography MS - Positive (LC-MS (Positive)) (1)
Liquid Chromatography MS - alternating - hilic (1)
Liquid Chromatography MS - negative - reverse (1)
Liquid Chromatography MS - positive - reverse (1)
PTR-MS (1)
Tandem Gas Chromatography MS - positive (1)

Publication Date

2022 (19)
2013 (18)
2020 (18)
2021 (17)
2015 (17)
2010 (16)
2024 (14)
2023 (13)
2012 (11)
2026 (10)
2016 (10)
2014 (10)
2019 (9)
2025 (9)
2018 (7)
2011 (7)
2017 (3)
2009 (3)
2008 (2)
2007 (1)

CHEBI ID

CHEBI:17521 (6)
CHEBI:30769 (6)
CHEBI:15756 (5)
CHEBI:18183 (5)
CHEBI:28527 (5)
CHEBI:15354 (4)
CHEBI:16015 (4)
CHEBI:16027 (4)
CHEBI:16112 (4)
CHEBI:16243 (4)
CHEBI:16860 (4)
CHEBI:17203 (4)
CHEBI:22660 (4)
CHEBI:28044 (4)
CHEBI:28499 (4)
CHEBI:28842 (4)
CHEBI:28875 (4)
CHEBI:520 (4)
CHEBI:65751 (4)
CHEBI:7916 (4)
CHEBI:141139 (3)
CHEBI:15318 (3)
CHEBI:15428 (3)
CHEBI:15603 (3)
CHEBI:15741 (3)
CHEBI:15843 (3)
CHEBI:16335 (3)
CHEBI:16467 (3)
CHEBI:16610 (3)
CHEBI:16643 (3)

Metabolite Name

3-O-methylquercetin (3)
Quinic acid (3)
Xanthine (3)
1,5-dicaffeoylquinic acid (2)
2,3,5-tricaffeoylaltraric acid (2)
2,4,5-tricaffeoylaltraric acid (2)
Altraric acid (2)
Arachidonic acid (2)
Biflavonoid (2)
Creatinine (2)
D-Mannose (2)
Hypoxanthine (2)
Inosine (2)
Kaempferol (2)
L-Phenylalanine (2)
Linoleic acid (2)
Longipilin acetate (2)
Palmitic acid (2)
Polymatin B (2)
Prostaglandin I2 (2)
Protocatechuic acid (2)
Quercetin (2)
Spermidine (2)
Stearic acid (2)
Uracil (2)
Uridine (2)
(-)-Riboflavin (1)
(15Z)-9,12,13-Trihydroxy-15-octadecenoic acid (1)
(3-Carboxypropyl)trimethylammonium cation (1)
(3-Methyl-3-oxetanyl)methyl 4-methylbenzenesulfonate (1)

First Public Date

2024 (2)
2014 (1)

Study type

Transcription profiling by array (61)
RNA-seq of coding RNA (15)
ChIP-seq (6)
Comparative genomic hybridization by array (3)
Methylation profiling by high throughput sequencing (3)
Unknown experiment type (2)
ChIP-chip by array (2)
Spatial transcriptomics by high-throughput sequencing (1)
MicroRNA profiling by array (1)
Methylation profiling by array (1)
RNA-seq of coding RNA from single cells (1)

Release Date

2022 (411)
2023 (400)
2021 (390)
2025 (379)
2024 (324)
2020 (249)
2019 (179)
2018 (150)
2017 (117)
2016 (112)
2015 (108)
2014 (85)
2013 (69)
2026 (57)
2012 (56)
2010 (40)
2011 (36)
2009 (27)
2008 (9)
2007 (9)
2000 (4)
2005 (3)
2002 (3)
2001 (3)
2003 (2)
2006 (1)
2004 (1)

Lab affiliation

Laboratory for Structural and Computational Proteomics, Carlos Chagas Institute, Fiocruz, Paraná, Brazil (3)
CRG, UPF (2)
School of Biomedical and Healthcare Sciences; Plymouth University (UK) (2)
Technische Universität Berlin The University of Edinburgh (2)
1- CIISA - Centre for Interdisciplinary Research in Animal Health, Faculdade de Medicina Veterinária, Universidade de Lisboa, 1300-477 Lisboa, Portugal 2- AL4AnimalS - Associate Laboratory for Animal and Veterinary Sciences, Faculdade de Medicina Veterinária, Universidade de Lisboa, 1300-477 Lisboa, Portugal (1)
1- i3S - Instituto de Investigação e Inovação em Saúde, Universidade do Porto, Portugal 2- IBMC - Instituto de Biologia Celular e Molecular, Universidade do Porto, Portugal 3- ICBAS - Instituto de Ciências Biomédicas Abel Salazar, Universidade do Porto, Portugal (1)
1- i3S - Instituto de Investigação e Inovação em Saúde,Universidade do Porto, Portugal 2- IBMC - Instituto de Biologia Celular e Molecular, Universidade do Porto, Portugal 3- ICBAS - Instituto de Ciências Biomédicas Abel Salazar, Universidade do Porto, Portugal (1)
Actinobacteria Laboratory, PROIMI-CONICET, Tucuman-Argentina (1)
Angiogenesis & Metabolism Laboratory, Max Planck Institut for Heart and Lung Research, 61231 Bad Nauheim, Germany (1)
Associate professor at University of Campinas-SP (UNICAMP-SP) (1)
Biological Mass Spectrometry Lab,Department of Translational Medicine (DiMeT),Center for Translational Research on Autoimmune & Allergic Diseases - CAAD, University of Piemonte Orientale, Novara (NO),Italy. (1)
Biomolecular Mass Spectrometry and Proteomics Bijvoet Center for Biomolecular Reseach and Utrecht Institute of Pharmaceutical Sciences Utrecht University Padualaan 8, 3584 CH Utrecht, The Netherland (1)
CEA-Marcoule, ProGénoMIX platform, DRF-Li2D, 30207 Bagnols-sur-Cèze, France (1)
Carlos Chagas Institute - Fiocruz - Brazil (1)
Center for Genomic Regilation, University Pompeu Fabra (1)
Center for Genomic Regulation, Universitat Pompeu Fabra, 08003 Barcelona, Spain (1)
Center for Macroecology, Evolution and Climate, Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark. The Bioinformatics Centre, Department of Biology, University of Copenhagen, Copenhagen, Denmark. (1)
Centre de Recherche des Cordeliers, Sorbonne Université, INSERM, Université de Paris, Oral Molecular Pathophysiology, F-75006, France (1)
Centre for Haemato-oncology, Barts Cancer Institute, Queen Mary University of London, London, EC1M6BQ, UK (1)
Centro de Pesquisa em Virologia (CPV) and Departamento de Biologia Celular e Molecular, Faculdade de Medicina de Ribeirão Preto, Universidade de São Paulo, Ribeirão Preto, SP, Brazil (1)
Chair of Proteomics and Bioanalytics, TU Munich (1)
Departament of Biological Sciences, Laboratory of Enzimology and Proteomics, UFederal University of Ouro Preto, Brazil (1)
Departamento de Bioquimica, Escola Paulista de Medicina, UniversidadeFederal de Sao Paulo, SP, Brazil (1)
Department for Molecular and Applied Microbiology, Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute Jena, Leibniz-HKI (1)
Department of Biomedicine, Aarhus University (1)
Department of Bionanoscience, Delft University of Technology (1)
Department of Functional and Molecular Biology, Institute of Biology, State University of Campinas (UNICAMP), Brazil (1)
Department of Innovative Technologies in Medicine & Dentistry, University of Chieti, Italy (1)
Department of Internal Medicine, Botucatu Medical School, São Paulo State University, UNESP, SP, Brazil (1)
Department of Morphology, Faculty of Medicine, Federal University of Ceará, Fortaleza, Ceara Brazil (1)

3359 Results

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