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MetabolomicsFermented cotton stalks preserve colonic epithelial integrity in Hu sheep by modulating the microbiota–metabolite–NF-kB/MLCK axis

This study compared three cotton-stalk processing strategies—grinding (FS), steam explosion (PH), and microbial fermentation (FJ)—and evaluated whether the barrier-preserving phenotype observed with fermented cotton stalks is associated with coordinated changes in the microbiota–metabolite milieu...

2026-03-18 | MTBLS14078 | MetaboLights
TranscriptomicsGlobal gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress in leaf tissue.
Transcriptome analysis in cotton under drought stress. To study the molecular response of drought stress in cotton under field condition global gene expression analysis was carried out in leaf tissue. Gossypium hirsutum cv. Bikaneri Nerma was used for the gene expression analysis. Cotton plants were...
ORGANISM(S): Gossypium hirsutum 
2012-06-03 | E-GEOD-29566 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress during fibre development stages.
Transcriptome analysis in cotton during fibre development stages. To study the molecular response of drought stress in cotton under field condition global gene expression analysis was carried out at fibre development stages (0, 5, 10 and 20 dpa/Days post anthesis). Gossypium hirsutum cv. Bikaneri Ne...
ORGANISM(S): Gossypium hirsutum 
2012-06-03 | E-GEOD-29567 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress in leaf tissue and during fibre development stages.
This SuperSeries is composed of the following subset Series: GSE29566: Global gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress in leaf tissue. GSE29567: Global gene expression analysis of cotton (Gossypium hirsutum L.) under drought stress during fibre development stag...
ORGANISM(S): Gossypium hirsutum 
2012-06-03 | E-GEOD-29810 | biostudies-arrayexpress
TranscriptomicsGlobal gene expression analysis of waterlogging stressed Cotton root and leaf tissue
Global gene expression was compared between roots of cotton plants (variety Sicot 71) flooded for 4 hours and roots of unflooded cotton plants. Global gene expression was also compared between leaves of cotton plants (variety Sicot 71) flooded for 24 hours and leaves of unflooded cotton plants. Wate...
ORGANISM(S): Gossypium hirsutum 
2010-05-17 | E-GEOD-16467 | biostudies-arrayexpress
TranscriptomicsHpa1Xoo-Mediated Transcriptome in Transgenic Cotton
Hpa1Xoo-Mediated Transcriptome in Transgenic Cotton Reveals the Constitutively Expressed Diverse Defense genes in Multiple Signaling Pathways Associated with Hypersensitive Cell Death Like other harpins, harpinXoo enables plants to acquire multiple resistance to pathogen and insect attack. However,...
ORGANISM(S): Gossypium hirsutum 
2010-12-01 | E-GEOD-20446 | biostudies-arrayexpress
TranscriptomicsDifferentiation of fiber initials on cotton ovules
Transcriptional profiling of cotton ovule cells. Comparison of expression of genes in cultured ovules (-1 DPA) treated with or without phytohormones (5um IAA and 1um GA) and over a time-course from 0 to 12 hours. The phytohormone incubation periods for unfertilized ovules were 0, 1, 3, 6, and 12 ho...
ORGANISM(S): Gossypium hirsutum 
2015-05-01 | E-GEOD-66251 | biostudies-arrayexpress
TranscriptomicsGenome-wide profiling of miRNAs and their target genes during somatic embryogenesis in cotton by small RNA and degradome sequencing
MicroRNAs (miRNAs) are endogenous non-coding ~21 nucleotide (nt) RNAs that regulate gene expression at transcriptional and post-transcriptional levels in plants and animals. They play an important role in development, abiotic stress responses or pathogen responses. miRNAs with their related target g...
ORGANISM(S): Gossypium hirsutum 
2013-03-08 | E-GEOD-41132 | biostudies-arrayexpress
TranscriptomicsProfile of small interfering RNAs from cotton plants infected with the polerovirus Cotton leafroll dwarf virus
In response to infection, viral genomes are processed by Dicer-like (DCL) ribonuclease proteins into viral small RNAs (vsRNAs) of discrete sizes. vsRNAs are then used as guides for silencing the viral genome. The profile of vsRNAs produced during the infection process has been extensively studied fo...
ORGANISM(S): Gossypium hirsutum 
2012-07-16 | E-GEOD-31062 | biostudies-arrayexpress
TranscriptomicsGlobal Analysis of the developmental dynamics of Gossypium hirsutum based on strand-specific transcriptome
Cotton is the most important economic crop that provides natural fibre and by-products such as oil and protein. The global gene expression could provide insight into the biological processes underlying growth and development, which involving suites of genes expressed with temporal and spatial contro...
ORGANISM(S): Gossypium hirsutum 
2016-02-29 | E-GEOD-70369 | biostudies-arrayexpress
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