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TranscriptomicsA Comparison of microarray and MPSS Technology Platforms for Expression Analysis of Arabidopsis
A comparison of microarray and MPSS technologies can help to establish the metrics for data comparisons across these technology platforms and determine some of the factors affecting the measurement of mRNA abundances using different platforms. Here, different Treatments/Conditions based on differen...
ORGANISM(S): Arabidopsis thaliana 
2007-09-14 | E-GEOD-8994 | biostudies-arrayexpress
TranscriptomicsMagnaporthe oryzae Gene Expression During Biotrophic Invasion of Rice (Agilent Array, G4137B)
The hemibiotrophic fungus Magnaporthe oryzae produces specialized biotrophic invasive hyphae (IH) that alter membrane structure and defense responses in invaded rice cells. IH successively invade live neighbor cells, apparently through plasmodesmata. Understanding fungal and rice genes that contri...
ORGANISM(S): Oryza sativa 
2009-04-08 | E-GEOD-8517 | biostudies-arrayexpress
TranscriptomicsAnalysis of the Interaction Transcriptome During Biotrophic Invasion of Rice by the Blast Fungus, Magnaporthe oryzae
This SuperSeries is composed of the following subset Series: GSE8517: Magnaporthe oryzae gene expression during biotrophic invasion of rice using version 2 of the Agilent Magnaporthe grisea Array (G4137B). GSE8518: Rice gene expression during biotrophic invasion by the rice blast fungus Magnaporthe...
ORGANISM(S): Magnaporthe oryzae 
2009-04-08 | E-GEOD-8670 | biostudies-arrayexpress
TranscriptomicsTranscription profiling of Arabidopsis or Thlaspi caerulescens roots exposed to deficient, sufficient or excess zinc
A common reference model was used to design the microarray experiment, in which cDNA from T. caerulescens roots exposed to 100 uM (sufficient) zinc was used as the common reference. Every slide was always hybridized with the common reference sample and with a sample from one of the treatments (Arabi...
ORGANISM(S): Thlaspi caerulescens 
2006-10-10 | E-MEXP-877 | biostudies-arrayexpress
TranscriptomicsGene Expression in the Rice Blast Fungus, Magnaporthe grisea, During Nitrogen Starvation
This experiment was designed to analyze transcriptional changes that occur when the fungal plant pathogen M. grisea is shifted from a complete media to a nitrogen-starved media. Comparisons were made in the following way between fungal mycelial grown in minimal media supplemented with a nitrogen sou...
ORGANISM(S): Magnaporthe grisea 
2010-07-01 | E-GEOD-2716 | biostudies-arrayexpress
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