Coxsackievirus - OmicsDI

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IgG negative for EV71 and CA21 (1)

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CHEBI ID

CHEBI:17925 (2)
CHEBI:18009 (2)
CHEBI:17992 (2)
CHEBI:50129 (2)
CHEBI:18132 (2)
CHEBI:25017 (2)
CHEBI:17154 (2)
CHEBI:7563 (2)
CHEBI:17750 (2)
CHEBI:15891 (2)
CHEBI:18050 (2)
CHEBI:43355 (2)
CHEBI:16704 (2)
CHEBI:17053 (2)
CHEBI:16015 (2)
CHEBI:16027 (2)
CHEBI:16737 (2)
CHEBI:16919 (2)
CHEBI:15724 (2)
CHEBI:15354 (2)
CHEBI:17596 (2)
CHEBI:34608 (1)
CHEBI:143796 (1)
CHEBI:143795 (1)
CHEBI:143793 (1)
CHEBI:143792 (1)
CHEBI:79736 (1)
CHEBI:91061 (1)
CHEBI:15040 (1)
CHEBI:143794 (1)

Metabolite Name

Allantoin (3)
Creatine (3)
Inosine (3)
2'-Deoxyadenosine (2)
Bovinic acid (2)
Phenyl acetate (2)
Betaine (2)
Thymine (2)
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N-Acetylmannosamine (2)
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Adenine (2)
Uric acid (2)
L-Serine (2)
Thymidine (2)
Uridine (2)
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Urea (2)
L-Phenylalanine (2)

IsPrivate

False (1)

First Public Date

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2021 (5)
2019 (5)
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Classification

viruses (37)

Modelling Approach

Ordinary differential equation model (1)

Modification

4x(2)H labeled dimethylated residue (1)

Study type

Transcription profiling by array (86)
RNA-seq of coding RNA (8)
RNA-seq of coding RNA from single cells (7)
Unknown experiment type (1)
Human - One-color microarray (1)
Antigen profiling (1)
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DNA-seq (1)
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Release Date

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1999 (4)
2002 (3)
1998 (2)

Lab affiliation

Turku Centre for Biotechnology University of Turku and Åbo Akademi University Finland (2)
University of Oxford University of Dundee (2)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Utrecht University, Padualaan 8, 3584 CH Utrecht, The Netherlands Netherlands Proteomics Centre, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
Canada Research Chair in Proteomics and Systems Biology, Faculty of Dentistry, Department of Oral Biological and Medical Sciences, University of British Columbia (1)
Cancer Proteomics Mass Spectrometry, Oncology-Pathology Department,Karolinska Institutet (1)
Center for Blood Research, UBC, Canada (1)
Center for Medical Biotechnology, VIB, 9000 Ghent, Belgium. Department for Biomolecular Medicine, Ghent University, 9000 Ghent, Belgium. VIB Proteomics Core, VIB, 9000 Ghent, Belgium. (1)
Charité – Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Institute of Biochemistry, 10117 Berlin, Germany; Deutsches Zentrum für Herz-Kreislauf-Forschung, partner site Berlin, 10117 Berlin, Germany (1)
Core Unit Proteomics, Berlin Institute of Health at Charite- Universitaetsmedizin Berlin and Max Delbrueck Center for Molecular Medicine (MDC), 13125 Berlin, Germany (1)
Soochow University (1)
UCSF (1)
Université Paris Cité, Institut Cochin, CNRS, INSERM, Paris, France (1)
VIB Proteomics Core Ghent University VIB Proteomics Core VIB-UGent Center for Medical Biotechnology UGent Department of Biomolecular Medicine (lab head) (1)
qingdao municipal hospital clinical research center (1)

Tags

pathogen:virus (37)
pathogen (37)
xref:PubMed:39778869 (4)
xref:PubMed:36402763 (1)
xref:PubMed:39697323 (1)
xref:PubMed:34555337 (1)
xref:PubMed:31618638 (1)
xref:PubMed:31906004 (1)
xref:PubMed:27765603 (1)
xref:PubMed:21525387 (1)
xref:PubMed:27760161 (1)
xref:PubMed:40737125 (1)
xref:PubMed:38836810 (1)
xref:PubMed:35604176 (1)
xref:PubMed:39670741 (1)
xref:PubMed:40105332 (1)
xref:PubMed:28242695 (1)
xref:PubMed:35024587 (1)
xref:PubMed:40892543 (1)
xref:PubMed:29263272 (1)
xref:PubMed:28724943 (1)
xref:PubMed:25015077 (1)
xref:PubMed:40606646 (1)
xref:PubMed:22328081 (1)
xref:PubMed:32192194 (1)
xref:PubMed:21338512 (1)
xref:PubMed:26375467 (1)
xref:PubMed:38226810 (1)
covid19 (1)

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Coxsackievirus A6

Coxsackievirus A6 Genome sequencing

PRJNA1435577 | ENA

Coxsackievirus A22

Coxsackievirus A22 Genome sequencing

PRJNA865246 | ENA

Coxsackievirus A16

Coxsackievirus A16 Genome sequencing and assembly

PRJNA650026 | ENA

Coxsackievirus B1

Coxsackievirus B1 Genome sequencing

PRJNA1251823 | ENA

Coxsackievirus A22

Coxsackievirus A22 sequences from transplant patients

PRJNA811787 | ENA

Coxsackievirus B3

Coxsackievirus B3 Genome sequencing and assembly

PRJNA329169 | ENA

Coxsackievirus A6

Coxsackievirus A6 isolate 2022/Linyi/ShanDong/CHN VP1 gene, partial cds

PRJNA1051827 | ENA

Coxsackievirus A2

Coxsackievirus A2 Genome sequencing

PRJNA698275 | ENA

Coxsackievirus A16

Coxsackievirus A16 Genome sequencing

PRJNA873200 | ENA

Lopacinski2021 - Coxsackievirus B3 (CVB3) complete kinetics ODE model

Encoded model contains complete kinetics of infection for coxsackievirus B3 (CVB3), a compact and fast-acting RNA virus. The model consists of separable, detailed modules describing viral binding-delivery, translation-replication, and encapsidation. Specific module activities are dampened by the typ...

2021-10-26 | MODEL2110250001 | BioModels

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