Crispr-cas9 screening

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CHEBI ID

CHEBI:17568 (5)
CHEBI:16040 (4)
CHEBI:18257 (4)
CHEBI:17533 (4)
CHEBI:16708 (4)
CHEBI:16742 (4)
CHEBI:17562 (4)
CHEBI:16750 (4)
CHEBI:17361 (4)
CHEBI:17748 (4)
CHEBI:37024 (4)
CHEBI:16235 (4)
CHEBI:16335 (4)
CHEBI:18211 (4)
CHEBI:15891 (4)
CHEBI:18107 (4)
CHEBI:16704 (4)
CHEBI:30915 (4)
CHEBI:16737 (4)
CHEBI:16919 (4)
CHEBI:17596 (4)
CHEBI:17368 (4)
CHEBI:16284 (3)
CHEBI:28862 (3)
CHEBI:24266 (3)
CHEBI:17172 (3)
CHEBI:17553 (3)
CHEBI:16450 (3)
CHEBI:48430 (3)
CHEBI:17256 (3)

Metabolite Name

AMP (3)
GMP (3)
Uric acid (3)
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IMP (2)

First Public Date

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2022 (51)
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2018 (17)
2016 (6)
2015 (4)
2014 (2)

Classification

viruses (1)

Study type

RNA-seq of coding RNA (16)
Transcription profiling by array (9)
DNA-seq (8)
Other (3)
Genotyping by high throughput sequencing (2)
RNA-seq of coding RNA from single cells (2)
Human - Single-cell sequencing (1)
Animal - High-throughput sequencing (1)
Hi-C (1)
RNA-seq of total RNA (1)

Release Date

2022 (206)
2025 (195)
2021 (174)
2023 (172)
2024 (144)
2020 (131)
2019 (110)
2018 (80)
2017 (61)
2016 (42)
2026 (29)
2015 (27)
2014 (9)
2013 (1)

Lab affiliation

Dpt. of Immunobiology, University of Lausanne, Chemin de Boveresses 155, 1066 Epalinges, Switzerland (2)
2 Yuanmingyuan West Road, Haidian District, Beijing, P.R. China 100193Yuanmingyuan West Road, Haidian District, Beijing, P.R. China 100193 (1)
2. Wellcome MRC Cambridge Stem Cell Institute, University of Cambridge, Cambridge, UK (1)
Assistant professor, School of Biological Sciences, Seoul National University (1)
Balgrist Campus Lengghalde 5 CH-8008 Zürich Switzerland (1)
Biomolecular Mass Spectrometry and Proteomics, Bijvoet Center for Biomolecular Research and Utrecht Institute for Pharmaceutical Sciences, Science4Life, University of Utrecht, Padualaan 8, 3584 CH Utrecht, The Netherlands (1)
Cambridge Institute of Therapeutic Immunology & Infectious Disease (CITIID), Jeffrey Cheah Biomedical Centre, Department of Medicine, University of Cambridge, Cambridge, CB2 0AW, UK (1)
Debora Bonenfant, Novartis Institutes for Biomedical research, Basel, Switzerland (1)
Department of Basic and Clinical Neuroscience, The Maurice Wohl Clinical Neuroscience Institute, Institute of Psychiatry, Psychology, & Neuroscience, King’s College London, London, UK (1)
Department of Biochemistry, Albert Einstein College of Medicine, Bronx, NY 10461, United States (1)
Department of Biology University of York Heslington York YO10 5DD (1)
Department of Cell Biology, School of Basic Medical Sciences, Cheeloo College of Medicine, Shandong University, Jinan 250012, China. (1)
Department of Chemical Biology & Drug Discovery, Utrecht Institute for Pharmaceutical Sciences, Utrecht University, 3584 CG Utrecht, The Netherlands (1)
Department of Hematology, Erasmus MC, Rotterdam, the Netherlands (1)
Department of Immunobiology, University of Lausanne (Chemin des Boveresses 155, Epalinges 1066) (1)
Department of Medical Biochemistry and Cell Biology, Instititute of Biomedicine at the Sahlgrenska Academy, University of Gothenburg, SE-40530 Gothenburg, Sweden (1)
Department of Microbiology and Molecular Genetics University of Pittsburgh (1)
Dept. of Molecular Hematology, Sanquin Research, Amsterdam, the Netherlands, and Landsteiner Laboratory, University of Amsterdam, Amsterdam, the Netherlands (1)
Functional Proteomic, ICR (1)
Functional Proteomics Lab, Life Sciences Dept. University of Siena, Siena, Italy (1)
Functional Proteomics, ICR (1)
Harvard Medical School and Brigham and Women’s Hospital, Boston, Massachusetts, 02115, USA (1)
Harvard Medical School/Brigham and Women's Hospital (1)
Head of Mitochondrial dysfunction in metabolic diseases lab. ERC Researcher. CBMSO-UAM C/ Nicolas Cabrera, 1 28049 Madrid, Spain. (1)
Head of the Curie Institute's mass spectrometry platform (LSMP) (1)
Institut de recherches cliniques de Montréal, Center for Genetic and Neurological Diseases,Montréal, QC, Canada Département de biochimie et médecine moléculaire, Université de Montréal, Montréal, QC, Canada Division of Experimental Medicine, McGill University, Montreal, QC, Canada (1)
Institute of molecular virology and cell biology (1)
Laboratory of Paediatrics, University of Groningen, University Medical Centre Groningen, Groningen, the Netherlands (1)
Lanzhou University Second Hospital (1)
Lenka Besse, PhD Department of Oncology and Hematology, Kantonsspital St Gallen, Rorschacherstrasse 95, St Gallen, Switzerland e-mail: lenka.kubiczek@gmail.com / Lenka.besse@kssg.ch phone: +41 (0) 71 494 1162 (1)

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CRISPR-Cas9 screening of lncRNAs and protein coding genes involved in the transdifferentiation from human pre-B cells into macrophages

BLaER1 cells are human leukemia pre-B cells able to transdifferentiate into functional and non-tumorigenic macrophages. With the goal of uncovering the genes involved in the transdifferentiation process, we have designed a DECKO (Double Excision CRISPR Knockout) library to knockout lncRNAs and prote...

ORGANISM(S): Homo sapiens

2022-04-25 | E-MTAB-10445 | biostudies-arrayexpress

In vivo Genome-scale CRISPR-Cas9 knockout screening

PRJNA515515 | ENA

CRC AI CRISPR/Cas9 screening

CRISPR/Cas9 knockout and activation screening of colorectal cancer allelic imbalance target genes

PRJEB25645 | ENA

Enabling multiplexed CRISPR/Cas9 screening via massively parallel in-library ligation

PRJNA630673 | ENA

The genomic landscape of sensitivity to Arsenic Trioxide characterized by Genome-wide CRISPR-Cas9 screening

PRJNA906516 | ENA

Elucidation of remdesivir cytotoxicity pathways through genome-wide CRISPR/Cas9 screening and transcriptomics

PRJNA647903 | ENA

CRISPR/Cas9 screening targeting the deregulated metabolic genes in Huh 7 cells

PRJNA766069 | ENA

CRISPR/Cas9-mediated genome editing of Schistosoma mansoni acetylcholinesterase

Here we report successful gene knock-in (KI) in the eggs of Schistosoma mansoni by combining CRISPR/Cas9 with single-stranded oligodeoxynucleotides (ssODNs). We targeted the acetylcholinesterase (AChE) gene of S. mansoni using two synthetic guide RNAs (gRNAs), X5 and X7, respectively. Liver eggs of ...

EGAS00001004455 | EGA

CRISPR-Cas9 Screening Reveals Microproteins Regulating Adipocyte Proliferation and Lipid Metabolism [RNA-seq]

PRJNA1263618 | ENA

CRISPR-Cas9 Screening Reveals Microproteins Regulating Adipocyte Proliferation and Lipid Metabolism [Ribo-seq]

PRJNA1263619 | ENA