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UnknownEfficient small fragment sequencing of human, cow, and bison miRNA, small RNA or csRNA-seq libraries using AVITI.
Not available
S-EPMC11160585 | biostudies-literature
UnknownEfficient small fragment sequencing of human, cattle, and bison miRNA, small RNA, or csRNA-seq libraries using AVITI.
Not available
S-EPMC11606011 | biostudies-literature
GenomicsInterplay between coding and non-coding regulation drives the Arabidopsis seed-to-seedling transition (csRNA-seq)
Interplay between coding and non-coding regulation drives the Arabidopsis seed-to-seedling transition (csRNA-seq)
PRJNA1053374 | ENA
GenomicsDNMT3A haploinsufficiency causes dichotomous DNA methylation defects at enhancers in mature human immune cells [csRNA-seq]
DNMT3A haploinsufficiency causes dichotomous DNA methylation defects at enhancers in mature human immune cells [csRNA-seq]
PRJNA714079 | ENA
GenomicsCapped small RNA sequencing (csRNA-seq) for genome-wide mapping of active transcription start sites and enhancer RNAs from total RNA
Capped small RNA sequencing (csRNA-seq) for genome-wide mapping of active transcription start sites and enhancer RNAs from total RNA
PRJNA1210985 | ENA
GenomicsEfficient small DNA fragment sequencing and miRNA, small RNA or csRNA-seq libraries using AVITI
Efficient small DNA fragment sequencing and miRNA, small RNA or csRNA-seq libraries using AVITI
PRJNA1113523 | ENA
OtherCapped small RNA sequencing (csRNA-seq) for genome-wide mapping of active transcription start sites and enhancer RNAs from total RNA
Profiling ongoing transcription reveals the complete active transcriptome, including unstable enhancer RNAs, and provides a dynamic view of transcription dynamics, enabling the study of underlying gene regulatory mechanisms. Here, we describe a detailed protocol for capped- small RNA- sequencing (cs...
ORGANISM(S): Homo sapiens 
2025-01-22 | GSE287021 | GEO
Genomics
Capped-small RNA-sequencing (csRNA-seq) of populations of poeciliid fish from hydrogen-sulfide rich and non-sulfidic springs in Mexico
PRJNA743555 | ENA
OtherEfficient small DNA fragment sequencing and miRNA, small RNA or csRNA-seq libraries using AVITI
Next-Generation Sequencing (NGS) catalyzed breakthroughs across various scientific domains. Illumina's sequencing by synthesis method has long been essential for NGS but emerging technologies like Element Biosciences' sequencing by avidity (AVITI) represent a novel approach. It has been reported tha...
ORGANISM(S): Homo sapiens Bison bison Bos taurus 
2024-06-26 | GSE267848 | GEO
GenomicsInterplay between coding and non-coding regulation drives the Arabidopsis seed-to-seedling transition (csRNA-seq)
Translation of seed stored mRNAs is essential to trigger germination. However, when RNAPII re-engages RNA synthesis during the seed-to-seedling transition has remained in question. Combining csRNA-seq, ATAC-seq and smFISH in Arabidopsis thaliana we demonstrate that active transcription initiation is...
ORGANISM(S): Arabidopsis thaliana 
2024-02-01 | GSE250329 | GEO
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